RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
SMC4-223ENST00000493695 GNPTABQ3T906 1256 aa7.39□□□□□ -1.23
SMC4-223ENST00000493695 VWA3BQ502W6 1294 aa7.39□□□□□ -1.23
SMC4-223ENST00000493695 HEATR6Q6AI08 1181 aaKnown RBP7.39□□□□□ -1.23
SMC4-223ENST00000493695 CCDC81Q6ZN84 652 aa7.39□□□□□ -1.23
SMC4-223ENST00000493695 TAB3Q8N5C8 712 aaPredicted RBP7.39□□□□□ -1.23
SMC4-223ENST00000493695 LZTR1Q8N653 840 aa7.39□□□□□ -1.23
SMC4-223ENST00000493695 SRRTQ9BXP5 876 aaKnown RBP7.39□□□□□ -1.23
SMC4-223ENST00000493695 NUDT5Q9UKK9 219 aa7.39□□□□□ -1.23
SMC4-223ENST00000493695 DIS3Q9Y2L1 958 aaKnown RBP7.39□□□□□ -1.23
SMC4-223ENST00000493695 VAMP4O75379 141 aa7.38□□□□□ -1.23
SMC4-223ENST00000493695 PMLP29590 882 aa7.38□□□□□ -1.23
SMC4-223ENST00000493695 CNR2P34972 360 aa7.38□□□□□ -1.23
SMC4-223ENST00000493695 CAP1Q01518 475 aa7.38□□□□□ -1.23
SMC4-223ENST00000493695 ZNF827Q17R98 1081 aa7.38□□□□□ -1.23
SMC4-223ENST00000493695 SAPCD2Q86UD0 394 aa7.38□□□□□ -1.23
SMC4-223ENST00000493695 GBP3Q9H0R5 595 aa7.38□□□□□ -1.23
SMC4-223ENST00000493695 TMPRSS5Q9H3S3 457 aa7.38□□□□□ -1.23
SMC4-223ENST00000493695 FBLN1P23142 703 aa7.37□□□□□ -1.23
SMC4-223ENST00000493695 EEF1DP3Q658K8 133 aa7.37□□□□□ -1.23
SMC4-223ENST00000493695 CPNE8Q86YQ8 564 aa7.37□□□□□ -1.23
SMC4-223ENST00000493695 CARFQ8N187 725 aa7.37□□□□□ -1.23
SMC4-223ENST00000493695 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
SMC4-223ENST00000493695 GULP1Q9UBP9 304 aa7.37□□□□□ -1.23
SMC4-223ENST00000493695 ZNF214Q9UL59 606 aaPredicted RBP7.37□□□□□ -1.23
SMC4-223ENST00000493695 SUGT1Q9Y2Z0 365 aa7.37□□□□□ -1.23
SMC4-223ENST00000493695 GLI4P10075 376 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 EFEMP1Q12805 493 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 HHIPL2Q6UWX4 724 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 TTLL7Q6ZT98 887 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 ZBTB8AQ96BR9 441 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 PEX11GQ96HA9 241 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 FGD4Q96M96 766 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 HAUS7Q99871 368 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 NTMQ9P121 344 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 WHRNQ9P202 907 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 PCDHB10Q9UN67 800 aa7.36□□□□□ -1.23
SMC4-223ENST00000493695 PPM1BO75688 479 aa7.35□□□□□ -1.23
SMC4-223ENST00000493695 SMAD4Q13485 552 aaKnown RBP7.35□□□□□ -1.23
SMC4-223ENST00000493695 ZFYVE27Q5T4F4 411 aa7.35□□□□□ -1.23
SMC4-223ENST00000493695 RCSD1Q6JBY9 416 aa7.35□□□□□ -1.23
SMC4-223ENST00000493695 B3GNT8Q7Z7M8 397 aa7.35□□□□□ -1.23
SMC4-223ENST00000493695 NLGN2Q8NFZ4 835 aa7.35□□□□□ -1.23
SMC4-223ENST00000493695 BACH2Q9BYV9 841 aa7.35□□□□□ -1.23
SMC4-223ENST00000493695 A0A087WZG4 1122 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 NPHP3-ACAD11A0A0J9YXS1 232 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 SH3D21A4FU49 640 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 C2orf71A6NGG8 1288 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 AURKAO14965 403 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 CBFA2T2O43439 604 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 SMARCA5O60264 1052 aaPredicted RBP7.34□□□□□ -1.23
SMC4-223ENST00000493695 SARSP49591 514 aaKnown RBP7.34□□□□□ -1.23
SMC4-223ENST00000493695 AMPD2Q01433 879 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 PPP2R5EQ16537 467 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 DDX11Q96FC9 970 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 BACE2Q9Y5Z0 518 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 DUSP10Q9Y6W6 482 aa7.34□□□□□ -1.23
SMC4-223ENST00000493695 LTBP3Q9NS15 1303 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 FUCA1P04066 466 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 PAMP19021 973 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 HTRA3P83110 453 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 SLC7A5Q01650 507 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 SLC9A5Q14940 896 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 TSPAN17Q96FV3 270 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 NOX5Q96PH1 765 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 MCMBPQ9BTE3 642 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 BTG4Q9NY30 223 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 SLC12A7Q9Y666 1083 aa7.33□□□□□ -1.24
SMC4-223ENST00000493695 EPHX1P07099 455 aa7.32□□□□□ -1.24
SMC4-223ENST00000493695 KRTAP5-3Q6L8H2 238 aa7.32□□□□□ -1.24
SMC4-223ENST00000493695 RBBP8NLQ8NC74 664 aaPredicted RBP7.32□□□□□ -1.24
SMC4-223ENST00000493695 FBLN5Q9UBX5 448 aa7.32□□□□□ -1.24
SMC4-223ENST00000493695 SIT1Q9Y3P8 196 aa7.32□□□□□ -1.24
SMC4-223ENST00000493695 NPHS1O60500 1241 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 ZBTB7AO95365 584 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 NTRK1P04629 796 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 CYP2C8P10632 490 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 EIF6P56537 245 aaKnown RBP7.31□□□□□ -1.24
SMC4-223ENST00000493695 FANCCQ00597 558 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 CACNB2Q08289 660 aaPredicted RBP7.31□□□□□ -1.24
SMC4-223ENST00000493695 TRIM26Q12899 539 aaPredicted RBP7.31□□□□□ -1.24
SMC4-223ENST00000493695 WWC2Q6AWC2 1192 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 NETO2Q8NC67 525 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 PPP1R14AQ96A00 147 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 PHAXQ9H814 394 aaKnown RBP7.31□□□□□ -1.24
SMC4-223ENST00000493695 GINM1Q9NU53 330 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 SMPD4Q9NXE4 827 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 EFR3BQ9Y2G0 817 aa7.31□□□□□ -1.24
SMC4-223ENST00000493695 NOBOXO60393 691 aa7.3□□□□□ -1.24
SMC4-223ENST00000493695 ZNF16P17020 682 aaPredicted RBP7.3□□□□□ -1.24
SMC4-223ENST00000493695 LOXL4Q96JB6 756 aa7.3□□□□□ -1.24
SMC4-223ENST00000493695 LNPKQ9C0E8 428 aa7.3□□□□□ -1.24
SMC4-223ENST00000493695 CGGBP1Q9UFW8 167 aaPredicted RBP7.3□□□□□ -1.24
SMC4-223ENST00000493695 TRBV23OR9-2A0A075B6M9 112 aa7.29□□□□□ -1.24
SMC4-223ENST00000493695 PPP1R11O60927 126 aaPredicted RBP7.29□□□□□ -1.24
SMC4-223ENST00000493695 MAGEA10P43363 369 aaPredicted RBP7.29□□□□□ -1.24
SMC4-223ENST00000493695 DLX2Q07687 328 aaPredicted RBP7.29□□□□□ -1.24
SMC4-223ENST00000493695 LDLRAD1Q5T700 205 aa7.29□□□□□ -1.24
SMC4-223ENST00000493695 KLHL25Q9H0H3 589 aa7.29□□□□□ -1.24
SMC4-223ENST00000493695 CLEC1BQ9P126 229 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms