RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 NDUFB10O96000 172 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 USP11P51784 963 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 TGFB2P61812 414 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 COBLL1Q53SF7 1204 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 NYAP1Q6ZVC0 841 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 NIM1KQ8IY84 436 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 SMYD4Q8IYR2 804 aaPredicted RBP12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 GIMAP8Q8ND71 665 aaPredicted RBP12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 MMTAG2Q9BU76 263 aaKnown RBP12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 AMNQ9BXJ7 453 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 LRRC27Q9C0I9 530 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 LRWD1Q9UFC0 647 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 LIMA1Q9UHB6 759 aaKnown RBP12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 PCDHA1Q9Y5I3 950 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 LRRC10BA6NIK2 292 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 H7C1D1 291 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 TDP2O95551 362 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 GH2P01242 217 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 SLURP2P0DP57 97 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 TNNT1P13805 278 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 TXKP42681 527 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 KMT5BQ4FZB7 885 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 FAM83AQ86UY5 434 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 NELFBQ8WX92 580 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 ARHGEF10LQ9HCE6 1279 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 ADD3Q9UEY8 706 aaKnown RBP12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 COL4A5P29400 1685 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 SLC37A4O43826 429 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 BMP3P12645 472 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 STX17P56962 302 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 UBE2SQ16763 222 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 SYDE2Q5VT97 1194 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 NOC3LQ8WTT2 800 aaKnown RBP12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 C16orf45Q96MC5 204 aaPredicted RBP12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 PDGFDQ9GZP0 370 aaPredicted RBP12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 DDX25Q9UHL0 483 aaKnown RBP12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 ITIH6Q6UXX5 1313 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 PSMA7O14818 248 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 RAD17O75943 681 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 PTPN14Q15678 1187 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 CNNM4Q6P4Q7 775 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 DHTKD1Q96HY7 919 aaPredicted RBP12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 MBOAT7Q96N66 472 aa12.13□□□□□ -0.47
PHACTR4-204ENST00000493669 CYP3A7-CYP3A51PA0A087WV96 503 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 FOSP01100 380 aaPredicted RBP12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 CYP3A7P24462 503 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 PBX1P40424 430 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 PRCPP42785 496 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 SHROOM1Q2M3G4 852 aaPredicted RBP12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 KRT79Q5XKE5 535 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 DEFB132Q7Z7B7 95 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 FBXO11Q86XK2 927 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 CNTNAP1P78357 1384 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 TCP10L2B9ZVM9 353 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 E4F1Q66K89 784 aaPredicted RBP12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 SV2BQ7L1I2 683 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 CDK5RAP3Q96JB5 506 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 ANO3Q9BYT9 981 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 EXOC1Q9NV70 894 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 PIM2Q9P1W9 311 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 GDAQ9Y2T3 454 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 PVALEFA0A1B0GWK0 134 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 RAD21O60216 631 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 GRB10Q13322 594 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 TMEM119Q4V9L6 283 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 HSP90AA4PQ58FG1 418 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 LRRC15Q8TF66 581 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 ZBED3Q96IU2 234 aaPredicted RBP12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 THAP9Q9H5L6 903 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 GOPCQ9HD26 462 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 TMX2Q9Y320 296 aa12.12□□□□□ -0.47
PHACTR4-204ENST00000493669 MYH7BA7E2Y1 1941 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 BICDL2A1A5D9 508 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 STX10O60499 249 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 HYIQ5T013 277 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 CEP135Q66GS9 1140 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 SH2D4AQ9H788 454 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 PLA2G6O60733 806 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 TRIM14Q14142 442 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 RRP1BQ14684 758 aaKnown RBP12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 PNMA5Q96PV4 448 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 PANX2Q96RD6 677 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 NT5C3AQ9H0P0 336 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
PHACTR4-204ENST00000493669 CLRN2A0PK11 232 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 USP27XA6NNY8 438 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 MEIS2O14770 477 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 TBX3O15119 743 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 ASIC1P78348 528 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 JAG1P78504 1218 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 KRT31Q15323 416 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 TCP11X2Q5H9J9 407 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 TMEM139Q8IV31 216 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms