RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 KATNBL1Q9H079 304 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 IL1RAPL2Q9NP60 686 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 PDGFCQ9NRA1 345 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 POLR3EQ9NVU0 708 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 CHD7Q9P2D1 2997 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 GNEQ9Y223 722 aaKnown RBP6.87□□□□□ -1.31
A1CF-210ENST00000493415 EXOC6BQ9Y2D4 811 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 SLC4A4Q9Y6R1 1079 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 DDX49Q9Y6V7 483 aaKnown RBP6.87□□□□□ -1.31
A1CF-210ENST00000493415 SCN10AQ9Y5Y9 1956 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 PIEZO1Q92508 2521 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 CHD9Q3L8U1 2897 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 MINDY4BA8MYZ0 360 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 H3BQ06 376 aaPredicted RBP6.86□□□□□ -1.31
A1CF-210ENST00000493415 ATP2A1O14983 1001 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 LPXNO60711 386 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 BAIAP3O94812 1187 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 IFIT2P09913 472 aaKnown RBP6.86□□□□□ -1.31
A1CF-210ENST00000493415 IQCF3P0C7M6 154 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 CPT1AP50416 773 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 SLFNL1Q499Z3 407 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 BRDTQ58F21 947 aaPredicted RBP6.86□□□□□ -1.31
A1CF-210ENST00000493415 NSMFQ6X4W1 530 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 ITPRIPQ8IWB1 547 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 CCDC155Q8N6L0 562 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.86□□□□□ -1.31
A1CF-210ENST00000493415 TGS1Q96RS0 853 aaKnown RBP6.86□□□□□ -1.31
A1CF-210ENST00000493415 MTG1Q9BT17 334 aaPredicted RBP6.86□□□□□ -1.31
A1CF-210ENST00000493415 KCNH6Q9H252 994 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 SLC38A10Q9HBR0 1119 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 A1CFQ9NQ94 594 aaKnown RBP6.86□□□□□ -1.31
A1CF-210ENST00000493415 ARPP21Q9UBL0 812 aaPredicted RBP6.86□□□□□ -1.31
A1CF-210ENST00000493415 CLIP2Q9UDT6 1046 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 FEM1BQ9UK73 627 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 FAM50BQ9Y247 325 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 MICAL3Q7RTP6 2002 aa6.86□□□□□ -1.31
A1CF-210ENST00000493415 XIRP2A4UGR9 3374 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 TCRBV5S4A2TA0A5A2 114 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 SOWAHBA6NEL2 793 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 C19orf67A6NJJ6 358 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 CSPG5O95196 566 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 ADD2P35612 726 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 STAT2P52630 851 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 OAZ1P54368 228 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 WDR5P61964 334 aaKnown RBP6.85□□□□□ -1.31
A1CF-210ENST00000493415 NKX3-2P78367 333 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 DEFB103AP81534 67 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 PURAQ00577 322 aaKnown RBP6.85□□□□□ -1.31
A1CF-210ENST00000493415 PTPROQ16827 1216 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 NBPF20Q3BBV1 942 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 PUS10Q3MIT2 529 aaKnown RBP6.85□□□□□ -1.31
A1CF-210ENST00000493415 TMEM63BQ5T3F8 832 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 SLFN13Q68D06 897 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 IQSEC1Q6DN90 963 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 HS6ST3Q8IZP7 471 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 FAM133AQ8N9E0 248 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 FBXO22Q8NEZ5 403 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 VWCEQ96DN2 955 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 MFSD14AQ96MC6 490 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 TRERF1Q96PN7 1200 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 VTA1Q9NP79 307 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 PAG1Q9NWQ8 432 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 LMCD1Q9NZU5 365 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 NYAP2Q9P242 653 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 MTMR7Q9Y216 660 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 NOP58Q9Y2X3 529 aaKnown RBP6.85□□□□□ -1.31
A1CF-210ENST00000493415 Q9Y3F1 56 aa6.85□□□□□ -1.31
A1CF-210ENST00000493415 ATG2AQ2TAZ0 1938 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 RALGAPA2Q2PPJ7 1873 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 GRXCR2A6NFK2 248 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 TMEM232C9JQI7 657 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 PRDM1O75626 825 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 BMP3P12645 472 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 RASA1P20936 1047 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 TDO2P48775 406 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 SNAP25P60880 206 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 PPP2R5BQ15173 497 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 TKFCQ3LXA3 575 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 DUSP28Q4G0W2 176 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 TIGD5Q53EQ6 642 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 ZKSCAN2Q63HK3 967 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 CNKSR3Q6P9H4 555 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 CTR9Q6PD62 1173 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 HFE2Q6ZVN8 426 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.84□□□□□ -1.31
A1CF-210ENST00000493415 ZNF444Q8N0Y2 327 aaPredicted RBP6.84□□□□□ -1.31
A1CF-210ENST00000493415 CLASRPQ8N2M8 674 aaKnown RBP6.84□□□□□ -1.31
A1CF-210ENST00000493415 BBXQ8WY36 941 aaPredicted RBP6.84□□□□□ -1.31
A1CF-210ENST00000493415 ANKS1AQ92625 1134 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 PHOX2BQ99453 314 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.84□□□□□ -1.31
A1CF-210ENST00000493415 WDR11Q9BZH6 1224 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 UPF3BQ9BZI7 483 aaKnown RBP6.84□□□□□ -1.31
A1CF-210ENST00000493415 BOLA2Q9H3K6 86 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 SUGCTQ9HAC7 445 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 CCPG1Q9ULG6 757 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 ZNF318Q5VUA4 2279 aa6.84□□□□□ -1.31
A1CF-210ENST00000493415 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.83□□□□□ -1.32
A1CF-210ENST00000493415 PTPDC1A2A3K4 754 aa6.83□□□□□ -1.32
A1CF-210ENST00000493415 LINC01553A4QN01 128 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms