RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 E7EWF7 191 aa17.15■□□□□ 0.34
SS18L1-205ENST00000492466 TIMP1P01033 207 aa17.15■□□□□ 0.34
SS18L1-205ENST00000492466 TMEM63BQ5T3F8 832 aa17.15■□□□□ 0.34
SS18L1-205ENST00000492466 IFIT1BQ5T764 474 aaKnown RBP17.15■□□□□ 0.34
SS18L1-205ENST00000492466 TAPT1Q6NXT6 567 aa17.15■□□□□ 0.34
SS18L1-205ENST00000492466 C16orf59Q7L2K0 433 aa17.15■□□□□ 0.34
SS18L1-205ENST00000492466 TTC14Q96N46 770 aa17.15■□□□□ 0.34
SS18L1-205ENST00000492466 CDX2Q99626 313 aaPredicted RBP17.15■□□□□ 0.34
SS18L1-205ENST00000492466 RANBP17Q9H2T7 1088 aaKnown RBP17.15■□□□□ 0.34
SS18L1-205ENST00000492466 GPCPD1Q9NPB8 672 aa17.15■□□□□ 0.34
SS18L1-205ENST00000492466 LRRC37A2A6NM11 1700 aa17.15■□□□□ 0.34
SS18L1-205ENST00000492466 ASB14A6NK59 587 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 ARVCFO00192 962 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 ICAM1P05362 532 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 SLC16A2P36021 539 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 BEX3Q00994 111 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 TNFAIP2Q03169 654 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 FPGSQ05932 587 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 FAM126BQ8IXS8 530 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 SLC43A3Q8NBI5 491 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 PNMA1Q8ND90 353 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 MORC4Q8TE76 937 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 PDGFCQ9NRA1 345 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 ZSWIM5Q9P217 1185 aa17.14■□□□□ 0.33
SS18L1-205ENST00000492466 IFIT3O14879 490 aaKnown RBP17.13■□□□□ 0.33
SS18L1-205ENST00000492466 SLC27A2O14975 620 aa17.13■□□□□ 0.33
SS18L1-205ENST00000492466 REC8O95072 547 aa17.13■□□□□ 0.33
SS18L1-205ENST00000492466 CD4P01730 458 aa17.13■□□□□ 0.33
SS18L1-205ENST00000492466 SMPD1P17405 629 aa17.13■□□□□ 0.33
SS18L1-205ENST00000492466 CREB3L3Q68CJ9 461 aa17.13■□□□□ 0.33
SS18L1-205ENST00000492466 MFSD5Q6N075 450 aa17.13■□□□□ 0.33
SS18L1-205ENST00000492466 DGKHQ86XP1 1220 aa17.13■□□□□ 0.33
SS18L1-205ENST00000492466 ENAHQ8N8S7 591 aaPredicted RBP17.13■□□□□ 0.33
SS18L1-205ENST00000492466 RNPC3Q96LT9 517 aaKnown RBP17.13■□□□□ 0.33
SS18L1-205ENST00000492466 SPC25Q9HBM1 224 aa17.13■□□□□ 0.33
SS18L1-205ENST00000492466 CCPG1Q9ULG6 757 aa17.13■□□□□ 0.33
SS18L1-205ENST00000492466 GRIN2DO15399 1336 aa17.13■□□□□ 0.33
SS18L1-205ENST00000492466 A0A0U1RQG5 324 aaPredicted RBP17.12■□□□□ 0.33
SS18L1-205ENST00000492466 DHX16O60231 1041 aaKnown RBP17.12■□□□□ 0.33
SS18L1-205ENST00000492466 CYB5R4Q7L1T6 521 aa17.12■□□□□ 0.33
SS18L1-205ENST00000492466 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.12■□□□□ 0.331e-8■■■■■ 30.7
SS18L1-205ENST00000492466 REV3LO60673 3130 aa17.12■□□□□ 0.33
SS18L1-205ENST00000492466 MROH7Q68CQ1 1323 aa17.12■□□□□ 0.33
SS18L1-205ENST00000492466 NFIBO00712 420 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 SNHG28P0DPA3 235 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 PDHBP11177 359 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 BAATQ14032 418 aaPredicted RBP17.11■□□□□ 0.33
SS18L1-205ENST00000492466 WTAPQ15007 396 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 TMEM67Q5HYA8 995 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 RASIP1Q5U651 963 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 SYDE2Q5VT97 1194 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 IQSEC1Q6DN90 963 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 CXCL17Q6UXB2 119 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 CHST3Q7LGC8 479 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 TLK2Q86UE8 772 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 FBXO16Q8IX29 292 aaPredicted RBP17.11■□□□□ 0.33
SS18L1-205ENST00000492466 CLEC4DQ8WXI8 215 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 XIRP2A4UGR9 3374 aa17.11■□□□□ 0.33
SS18L1-205ENST00000492466 DYNC1LI2O43237 492 aaPredicted RBP17.1■□□□□ 0.33
SS18L1-205ENST00000492466 FSCN1Q16658 493 aaKnown RBP17.1■□□□□ 0.33
SS18L1-205ENST00000492466 TMEM240Q5SV17 173 aa17.1■□□□□ 0.33
SS18L1-205ENST00000492466 GPATCH4Q5T3I0 446 aaKnown RBP17.1■□□□□ 0.33
SS18L1-205ENST00000492466 NSMFQ6X4W1 530 aa17.1■□□□□ 0.33
SS18L1-205ENST00000492466 NFXL1Q6ZNB6 911 aa17.1■□□□□ 0.33
SS18L1-205ENST00000492466 STOX1Q6ZVD7 989 aa17.1■□□□□ 0.33
SS18L1-205ENST00000492466 EEPD1Q7L9B9 569 aa17.1■□□□□ 0.33
SS18L1-205ENST00000492466 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.1■□□□□ 0.33
SS18L1-205ENST00000492466 MYLIPQ8WY64 445 aa17.1■□□□□ 0.33
SS18L1-205ENST00000492466 VTI1AQ96AJ9 217 aa17.1■□□□□ 0.33
SS18L1-205ENST00000492466 PRC1O43663 620 aa17.09■□□□□ 0.33
SS18L1-205ENST00000492466 PARP1P09874 1014 aaKnown RBP17.09■□□□□ 0.33
SS18L1-205ENST00000492466 GOLGA8HP0CJ92 632 aa17.09■□□□□ 0.33
SS18L1-205ENST00000492466 CSF2RAP15509 400 aa17.09■□□□□ 0.33
SS18L1-205ENST00000492466 MCM5P33992 734 aa17.09■□□□□ 0.33
SS18L1-205ENST00000492466 ZNF543Q08ER8 600 aa17.09■□□□□ 0.33
SS18L1-205ENST00000492466 ASPRV1Q53RT3 343 aa17.09■□□□□ 0.33
SS18L1-205ENST00000492466 NOL8Q76FK4 1167 aaKnown RBP17.09■□□□□ 0.33
SS18L1-205ENST00000492466 VTA1Q9NP79 307 aa17.09■□□□□ 0.33
SS18L1-205ENST00000492466 Q9Y3F1 56 aa17.09■□□□□ 0.33
SS18L1-205ENST00000492466 TMEM265A0A087WTH1 108 aa17.08■□□□□ 0.32
SS18L1-205ENST00000492466 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.08■□□□□ 0.32
SS18L1-205ENST00000492466 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.08■□□□□ 0.32
SS18L1-205ENST00000492466 CABYRO75952 493 aa17.08■□□□□ 0.32
SS18L1-205ENST00000492466 ALDH5A1P51649 535 aaPredicted RBP17.08■□□□□ 0.32
SS18L1-205ENST00000492466 ITGA7Q13683 1181 aa17.08■□□□□ 0.32
SS18L1-205ENST00000492466 KRT32Q14532 448 aa17.08■□□□□ 0.32
SS18L1-205ENST00000492466 CATIPQ7Z7H3 387 aa17.08■□□□□ 0.32
SS18L1-205ENST00000492466 MB21D2Q8IYB1 491 aaPredicted RBP17.08■□□□□ 0.32
SS18L1-205ENST00000492466 UMODL1Q5DID0 1318 aa17.07■□□□□ 0.32
SS18L1-205ENST00000492466 RBM47A0AV96 593 aaKnown RBP17.07■□□□□ 0.32
SS18L1-205ENST00000492466 CCDC69A6NI79 296 aa17.07■□□□□ 0.32
SS18L1-205ENST00000492466 DNAJB2P25686 324 aa17.07■□□□□ 0.32
SS18L1-205ENST00000492466 CYP2C18P33260 490 aa17.07■□□□□ 0.32
SS18L1-205ENST00000492466 FGD1P98174 961 aa17.07■□□□□ 0.32
SS18L1-205ENST00000492466 PPIGQ13427 754 aaKnown RBP eCLIP17.07■□□□□ 0.329e-8■□□□□ 11.2
SS18L1-205ENST00000492466 GRIN2CQ14957 1233 aa17.07■□□□□ 0.32
SS18L1-205ENST00000492466 NECTIN1Q15223 517 aa17.07■□□□□ 0.32
SS18L1-205ENST00000492466 DUSP28Q4G0W2 176 aa17.07■□□□□ 0.32
SS18L1-205ENST00000492466 SLC30A10Q6XR72 485 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms