RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ZBBXA8MT70 800 aa15.72■□□□□ 0.11
USF1-206ENST00000491629 APPP05067 770 aa15.72■□□□□ 0.11
USF1-206ENST00000491629 CA3P07451 260 aa15.72■□□□□ 0.11
USF1-206ENST00000491629 GNAT2P19087 354 aa15.72■□□□□ 0.11
USF1-206ENST00000491629 SLC1A4P43007 532 aa15.72■□□□□ 0.11
USF1-206ENST00000491629 PURAQ00577 322 aaKnown RBP15.72■□□□□ 0.11
USF1-206ENST00000491629 DUSP28Q4G0W2 176 aa15.72■□□□□ 0.11
USF1-206ENST00000491629 KIAA1211Q6ZU35 1233 aa15.72■□□□□ 0.11
USF1-206ENST00000491629 DEFB128Q7Z7B8 93 aa15.72■□□□□ 0.11
USF1-206ENST00000491629 RPUSD2Q8IZ73 545 aaKnown RBP15.72■□□□□ 0.11
USF1-206ENST00000491629 SEZ6LQ9BYH1 1024 aa15.72■□□□□ 0.11
USF1-206ENST00000491629 MYH7BA7E2Y1 1941 aa15.72■□□□□ 0.11
USF1-206ENST00000491629 TNKSO95271 1327 aa15.71■□□□□ 0.11
USF1-206ENST00000491629 ERC2O15083 957 aa15.71■□□□□ 0.11
USF1-206ENST00000491629 PPARAQ07869 468 aa15.71■□□□□ 0.11
USF1-206ENST00000491629 RCSD1Q6JBY9 416 aa15.71■□□□□ 0.11
USF1-206ENST00000491629 NSMFQ6X4W1 530 aa15.71■□□□□ 0.11
USF1-206ENST00000491629 EPHX3Q9H6B9 360 aa15.71■□□□□ 0.11
USF1-206ENST00000491629 ZNF287Q9HBT7 754 aa15.71■□□□□ 0.11
USF1-206ENST00000491629 VTA1Q9NP79 307 aa15.71■□□□□ 0.11
USF1-206ENST00000491629 ISY1Q9ULR0 285 aaKnown RBP15.71■□□□□ 0.11
USF1-206ENST00000491629 MUC6Q6W4X9 2439 aa15.7■□□□□ 0.1
USF1-206ENST00000491629 MYH6P13533 1939 aa15.7■□□□□ 0.1
USF1-206ENST00000491629 RBM47A0AV96 593 aaKnown RBP15.7■□□□□ 0.1
USF1-206ENST00000491629 NFIBO00712 420 aa15.7■□□□□ 0.1
USF1-206ENST00000491629 ZEB2O60315 1214 aa15.7■□□□□ 0.1
USF1-206ENST00000491629 ZFYP08048 801 aaPredicted RBP15.7■□□□□ 0.1
USF1-206ENST00000491629 NOVP48745 357 aa15.7■□□□□ 0.1
USF1-206ENST00000491629 CTDSPL2Q05D32 466 aa15.7■□□□□ 0.1
USF1-206ENST00000491629 IKQ13123 557 aaPredicted RBP15.7■□□□□ 0.1
USF1-206ENST00000491629 BAATQ14032 418 aaPredicted RBP15.7■□□□□ 0.1
USF1-206ENST00000491629 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
USF1-206ENST00000491629 MIER1Q8N108 512 aa15.7■□□□□ 0.1
USF1-206ENST00000491629 KHSRPQ92945 711 aaKnown RBP eCLIP15.7■□□□□ 0.1
USF1-206ENST00000491629 SIP14410 1827 aa15.7■□□□□ 0.1
USF1-206ENST00000491629 TLL1O43897 1013 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 LPXNO60711 386 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 ICAM1P05362 532 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 ALDH5A1P51649 535 aaPredicted RBP15.69■□□□□ 0.1
USF1-206ENST00000491629 TAP1Q03518 808 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 PDE4BQ07343 736 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 NBPF20Q3BBV1 942 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 TMEM67Q5HYA8 995 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 ZMYM1Q5SVZ6 1142 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 IL27Q8NEV9 243 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 FAM122AQ96E09 287 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 WDR11Q9BZH6 1224 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 RANBP17Q9H2T7 1088 aaKnown RBP15.69■□□□□ 0.1
USF1-206ENST00000491629 DCTPP1Q9H773 170 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 CCPG1Q9ULG6 757 aa15.69■□□□□ 0.1
USF1-206ENST00000491629 PIEZO1Q92508 2521 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 PFKMP08237 780 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 MYL3P08590 195 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 SLC16A2P36021 539 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 GPNMBQ14956 572 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 PI4K2BQ8TCG2 481 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 OTUD7AQ8TE49 926 aaPredicted RBP15.68■□□□□ 0.1
USF1-206ENST00000491629 COPS5Q92905 334 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 CTAGE1Q96RT6 745 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 LRFN3Q9BTN0 628 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 TSPYL2Q9H2G4 693 aaPredicted RBP15.68■□□□□ 0.1
USF1-206ENST00000491629 POLR3EQ9NVU0 708 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 STX8Q9UNK0 236 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 MTMR7Q9Y216 660 aa15.68■□□□□ 0.1
USF1-206ENST00000491629 IQCF3P0C7M6 154 aa15.67■□□□□ 0.1
USF1-206ENST00000491629 HOXD11P31277 338 aaPredicted RBP15.67■□□□□ 0.1
USF1-206ENST00000491629 SKIV2LQ15477 1246 aaKnown RBP15.67■□□□□ 0.1
USF1-206ENST00000491629 BTNL9Q6UXG8 535 aa15.67■□□□□ 0.1
USF1-206ENST00000491629 SLC30A10Q6XR72 485 aa15.67■□□□□ 0.1
USF1-206ENST00000491629 CLEC4DQ8WXI8 215 aa15.67■□□□□ 0.1
USF1-206ENST00000491629 C1QTNF1Q9BXJ1 281 aa15.67■□□□□ 0.1
USF1-206ENST00000491629 NAPBQ9H115 298 aa15.67■□□□□ 0.1
USF1-206ENST00000491629 C11orf16Q9NQ32 467 aa15.67■□□□□ 0.1
USF1-206ENST00000491629 SUPT20HL2P0C7V6 817 aa15.66■□□□□ 0.1
USF1-206ENST00000491629 GRB10Q13322 594 aa15.66■□□□□ 0.1
USF1-206ENST00000491629 TMCO2Q7Z6W1 182 aaPredicted RBP15.66■□□□□ 0.1
USF1-206ENST00000491629 HERC6Q8IVU3 1022 aa15.66■□□□□ 0.1
USF1-206ENST00000491629 ARNTL2Q8WYA1 636 aa15.66■□□□□ 0.1
USF1-206ENST00000491629 SLC9A7Q96T83 725 aa15.66■□□□□ 0.1
USF1-206ENST00000491629 MTG1Q9BT17 334 aaPredicted RBP15.66■□□□□ 0.1
USF1-206ENST00000491629 NACAP1Q9BZK3 213 aa15.66■□□□□ 0.1
USF1-206ENST00000491629 ATG2AQ2TAZ0 1938 aa15.66■□□□□ 0.1
USF1-206ENST00000491629 C5orf42Q9H799 3197 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 MICAL3Q7RTP6 2002 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 TRIOO75962 3097 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 LCHNA4D1U4 455 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 A6NJR5 290 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 TSPY2A6NKD2 308 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 PITPNM1O00562 1244 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 ARIH2O95376 493 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 EDNRBP24530 442 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 AAK1Q2M2I8 961 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 TCTN1Q2MV58 587 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 VPS53Q5VIR6 699 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 OR6J1Q8NGC5 347 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 PHOSPHO2Q8TCD6 241 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 CD320Q9NPF0 282 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 WDFY4Q6ZS81 3184 aa15.65■□□□□ 0.1
USF1-206ENST00000491629 PTPDC1A2A3K4 754 aa15.64■□□□□ 0.09
USF1-206ENST00000491629 GTPBP6O43824 516 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms