RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 CYP27B1O15528 508 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 GRIN3BO60391 1043 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 PF4P02776 101 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 PGRP06401 933 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 HOXA10P31260 410 aaPredicted RBP6.05□□□□□ -1.44
CSTF1-205ENST00000490539 GRK4P32298 578 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 MRPL58Q14197 206 aaKnown RBP6.05□□□□□ -1.44
CSTF1-205ENST00000490539 OGFOD2Q6N063 350 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 ARMCX6Q7L4S7 300 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 GATAD2BQ8WXI9 593 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 MISP3Q96FF7 219 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 FBXL18Q96ME1 805 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 FOXQ1Q9C009 403 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 TFCP2L1Q9NZI6 479 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 NCAPD2Q15021 1401 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 RGPD2P0DJD1 1756 aa6.04□□□□□ -1.44
CSTF1-205ENST00000490539 RBM47A0AV96 593 aaKnown RBP6.04□□□□□ -1.44
CSTF1-205ENST00000490539 CCDC85CA6NKD9 419 aa6.04□□□□□ -1.44
CSTF1-205ENST00000490539 GFRA2O00451 464 aa6.04□□□□□ -1.44
CSTF1-205ENST00000490539 CYP7A1P22680 504 aa6.04□□□□□ -1.44
CSTF1-205ENST00000490539 PRKAR2BP31323 418 aa6.04□□□□□ -1.44
CSTF1-205ENST00000490539 LMOD3Q0VAK6 560 aa6.04□□□□□ -1.44
CSTF1-205ENST00000490539 VSIG10LQ86VR7 867 aa6.04□□□□□ -1.44
CSTF1-205ENST00000490539 TTC5Q8N0Z6 440 aa6.04□□□□□ -1.44
CSTF1-205ENST00000490539 FLAD1Q8NFF5 587 aa6.04□□□□□ -1.44
CSTF1-205ENST00000490539 NETO1Q8TDF5 533 aa6.04□□□□□ -1.44
CSTF1-205ENST00000490539 PRDM5Q9NQX1 630 aaPredicted RBP6.04□□□□□ -1.44
CSTF1-205ENST00000490539 ZC3H7BQ9UGR2 993 aaKnown RBP6.04□□□□□ -1.44
CSTF1-205ENST00000490539 TPX2Q9ULW0 747 aaKnown RBP6.04□□□□□ -1.44
CSTF1-205ENST00000490539 F6X3S4 739 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 HTATSF1O43719 755 aaKnown RBP6.03□□□□□ -1.44
CSTF1-205ENST00000490539 LEFTY1O75610 366 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 NTF4P34130 210 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 CAP2P40123 477 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 IFI16Q16666 785 aaKnown RBP6.03□□□□□ -1.44
CSTF1-205ENST00000490539 MSMPQ1L6U9 139 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 GOLM1Q8NBJ4 401 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 AGBL5Q8NDL9 886 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 PIGBQ92521 554 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 PRKRIP1Q9H875 184 aaPredicted RBP6.03□□□□□ -1.44
CSTF1-205ENST00000490539 KBTBD4Q9NVX7 518 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 ADAM30Q9UKF2 790 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 SLC5A6Q9Y289 635 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 NHSQ6T4R5 1651 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 PALLDQ8WX93 1383 aa6.03□□□□□ -1.44
CSTF1-205ENST00000490539 SBF2Q86WG5 1849 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 TMEM265A0A087WTH1 108 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 IGF2BP3O00425 579 aaKnown RBP eCLIP6.02□□□□□ -1.45
CSTF1-205ENST00000490539 FOXN1O15353 648 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 CILPO75339 1184 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 PRNPP04156 253 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 YARSP54577 528 aaKnown RBP6.02□□□□□ -1.45
CSTF1-205ENST00000490539 CHMP4BP1P59074 171 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 MPP2Q14168 576 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 SLBPQ14493 270 aaKnown RBP eCLIP6.02□□□□□ -1.45
CSTF1-205ENST00000490539 SLC15A2Q16348 729 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 MTHFSDQ2M296 383 aaKnown RBP6.02□□□□□ -1.45
CSTF1-205ENST00000490539 CWF19L2Q2TBE0 894 aaKnown RBP6.02□□□□□ -1.45
CSTF1-205ENST00000490539 SLC6A19Q695T7 634 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 BNC2Q6ZN30 1099 aaPredicted RBP6.02□□□□□ -1.45
CSTF1-205ENST00000490539 ERMP1Q7Z2K6 904 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 TP53INP2Q8IXH6 220 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 COX4I2Q96KJ9 171 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 RHOVQ96L33 236 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 MIPEPQ99797 713 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 MTFR1LQ9H019 292 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 SLC52A2Q9HAB3 445 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 CCDC39Q9UFE4 941 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 MAPK8IP1Q9UQF2 711 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 PKD1L3Q7Z443 1732 aa6.02□□□□□ -1.45
CSTF1-205ENST00000490539 ZBED9Q6R2W3 1325 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 RGPD3A6NKT7 1758 aaPredicted RBP6.01□□□□□ -1.45
CSTF1-205ENST00000490539 RGPD4Q7Z3J3 1758 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 RNMTO43148 476 aaKnown RBP6.01□□□□□ -1.45
CSTF1-205ENST00000490539 STARD3NLO95772 234 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 F13A1P00488 732 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 CST3P01034 146 aaPredicted RBP6.01□□□□□ -1.45
CSTF1-205ENST00000490539 CEACAM5P06731 702 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 C8AP07357 584 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 PLCG1P19174 1290 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 POLD1P28340 1107 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 ZNF76P36508 570 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 EIF4A3P38919 411 aaKnown RBP6.01□□□□□ -1.45
CSTF1-205ENST00000490539 CDK8P49336 464 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 CALD1Q05682 793 aaKnown RBP6.01□□□□□ -1.45
CSTF1-205ENST00000490539 FAM160A1Q05DH4 1040 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 MRPL41Q8IXM3 137 aaKnown RBP6.01□□□□□ -1.45
CSTF1-205ENST00000490539 ABI1Q8IZP0 508 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 POU5F2Q8N7G0 328 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 FAM181AQ8N9Y4 354 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 FLCNQ8NFG4 579 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 PNISRQ8TF01 805 aaKnown RBP6.01□□□□□ -1.45
CSTF1-205ENST00000490539 HRASLS5Q96KN8 279 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 TEX13AQ9BXU3 409 aaPredicted RBP6.01□□□□□ -1.45
CSTF1-205ENST00000490539 FBRSQ9HAH7 460 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 METTL5Q9NRN9 209 aaKnown RBP6.01□□□□□ -1.45
CSTF1-205ENST00000490539 VAV3Q9UKW4 847 aa6.01□□□□□ -1.45
CSTF1-205ENST00000490539 DOT1LQ8TEK3 1739 aa6□□□□□ -1.45
CSTF1-205ENST00000490539 BTAF1O14981 1849 aa6□□□□□ -1.45
CSTF1-205ENST00000490539 FAM221AA4D161 298 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms