RNA–Protein interactions for RNA: ENST00000490458.1

SNAP29-203, Transcript of synaptosome associated protein 29, humanhuman

TSL 2

Gene SNAP29, Length 972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-203ENST00000490458 LRRFIP1Q32MZ4 808 aaKnown RBP19.35■□□□□ 0.69
SNAP29-203ENST00000490458 DCTPP1Q9H773 170 aa19.35■□□□□ 0.69
SNAP29-203ENST00000490458 MTMR7Q9Y216 660 aa19.35■□□□□ 0.69
SNAP29-203ENST00000490458 PRRC2BQ5JSZ5 2229 aaKnown RBP19.35■□□□□ 0.69
SNAP29-203ENST00000490458 TNKSO95271 1327 aa19.34■□□□□ 0.69
SNAP29-203ENST00000490458 PTPRSQ13332 1948 aa19.34■□□□□ 0.69
SNAP29-203ENST00000490458 TSPY2A6NKD2 308 aa19.34■□□□□ 0.69
SNAP29-203ENST00000490458 PFKMP08237 780 aa19.34■□□□□ 0.69
SNAP29-203ENST00000490458 ALDH5A1P51649 535 aaPredicted RBP19.34■□□□□ 0.69
SNAP29-203ENST00000490458 TFF2Q03403 129 aa19.34■□□□□ 0.69
SNAP29-203ENST00000490458 DUSP28Q4G0W2 176 aa19.34■□□□□ 0.69
SNAP29-203ENST00000490458 PPP4R3BQ5MIZ7 849 aa19.34■□□□□ 0.69
SNAP29-203ENST00000490458 IL17RBQ9NRM6 502 aa19.34■□□□□ 0.69
SNAP29-203ENST00000490458 RCAN3Q9UKA8 241 aa19.34■□□□□ 0.69
SNAP29-203ENST00000490458 NCOR1O75376 2440 aa19.34■□□□□ 0.69
SNAP29-203ENST00000490458 TET1Q8NFU7 2136 aa19.33■□□□□ 0.69
SNAP29-203ENST00000490458 RFXAPO00287 272 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 FOXP2O15409 715 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 ICAM1P05362 532 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 CA3P07451 260 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 BMP1P13497 986 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 PURAQ00577 322 aaKnown RBP19.33■□□□□ 0.68
SNAP29-203ENST00000490458 CTDSPL2Q05D32 466 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 CCDC96Q2M329 555 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 ZMYM1Q5SVZ6 1142 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 DEFB128Q7Z7B8 93 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 INCENPQ9NQS7 918 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 POLR3EQ9NVU0 708 aa19.33■□□□□ 0.68
SNAP29-203ENST00000490458 TRIP12Q14669 1992 aaPredicted RBP19.32■□□□□ 0.68
SNAP29-203ENST00000490458 MYL3P08590 195 aa19.32■□□□□ 0.68
SNAP29-203ENST00000490458 SUPT20HL2P0C7V6 817 aa19.32■□□□□ 0.68
SNAP29-203ENST00000490458 KCNQ1P51787 676 aa19.32■□□□□ 0.68
SNAP29-203ENST00000490458 BAATQ14032 418 aaPredicted RBP19.32■□□□□ 0.68
SNAP29-203ENST00000490458 TMEM67Q5HYA8 995 aa19.32■□□□□ 0.68
SNAP29-203ENST00000490458 FSD1Q9BTV5 496 aa19.32■□□□□ 0.68
SNAP29-203ENST00000490458 WDR11Q9BZH6 1224 aa19.32■□□□□ 0.68
SNAP29-203ENST00000490458 RANBP17Q9H2T7 1088 aaKnown RBP19.32■□□□□ 0.68
SNAP29-203ENST00000490458 COL4A4P53420 1690 aaPredicted RBP19.32■□□□□ 0.68
SNAP29-203ENST00000490458 TTC41PQ6P2S7 1318 aa19.31■□□□□ 0.68
SNAP29-203ENST00000490458 NFIBO00712 420 aa19.31■□□□□ 0.68
SNAP29-203ENST00000490458 SKIV2LQ15477 1246 aaKnown RBP19.31■□□□□ 0.68
SNAP29-203ENST00000490458 TTBK2Q6IQ55 1244 aa19.31■□□□□ 0.68
SNAP29-203ENST00000490458 OR6J1Q8NGC5 347 aa19.31■□□□□ 0.68
SNAP29-203ENST00000490458 PI4K2BQ8TCG2 481 aa19.31■□□□□ 0.68
SNAP29-203ENST00000490458 CERS4Q9HA82 394 aa19.31■□□□□ 0.68
SNAP29-203ENST00000490458 ADD3Q9UEY8 706 aaKnown RBP19.31■□□□□ 0.68
SNAP29-203ENST00000490458 MTCH2Q9Y6C9 303 aa19.31■□□□□ 0.68
SNAP29-203ENST00000490458 RBM47A0AV96 593 aaKnown RBP19.3■□□□□ 0.68
SNAP29-203ENST00000490458 EPOPA6NHQ4 379 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 SLC16A2P36021 539 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 PLA2G5P39877 138 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 NOVP48745 357 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 CPT1AP50416 773 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 AAK1Q2M2I8 961 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 FAM47CQ5HY64 1035 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 SLC30A10Q6XR72 485 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 PPP1R13LQ8WUF5 828 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 DCAF4Q8WV16 495 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 SLC9A7Q96T83 725 aa19.3■□□□□ 0.68
SNAP29-203ENST00000490458 MTG1Q9BT17 334 aaPredicted RBP19.3■□□□□ 0.68
SNAP29-203ENST00000490458 REV3LO60673 3130 aa19.29■□□□□ 0.68
SNAP29-203ENST00000490458 PTPDC1A2A3K4 754 aa19.29■□□□□ 0.68
SNAP29-203ENST00000490458 ERC2O15083 957 aa19.29■□□□□ 0.68
SNAP29-203ENST00000490458 GTPBP6O43824 516 aaPredicted RBP19.29■□□□□ 0.68
SNAP29-203ENST00000490458 RANBP6O60518 1105 aaKnown RBP19.29■□□□□ 0.68
SNAP29-203ENST00000490458 ARHGEF15O94989 841 aa19.29■□□□□ 0.68
SNAP29-203ENST00000490458 ACTN1P12814 892 aa19.29■□□□□ 0.68
SNAP29-203ENST00000490458 POU3F3P20264 500 aaPredicted RBP19.29■□□□□ 0.68
SNAP29-203ENST00000490458 SYDE2Q5VT97 1194 aa19.29■□□□□ 0.68
SNAP29-203ENST00000490458 KRT40Q6A162 431 aa19.29■□□□□ 0.68
SNAP29-203ENST00000490458 OTUD7AQ8TE49 926 aaPredicted RBP19.29■□□□□ 0.68
SNAP29-203ENST00000490458 LOC102724159A0A0B4J2E5 919 aa19.28■□□□□ 0.68
SNAP29-203ENST00000490458 RFC2P35250 354 aa19.28■□□□□ 0.68
SNAP29-203ENST00000490458 PWP2Q15269 919 aaKnown RBP19.28■□□□□ 0.68
SNAP29-203ENST00000490458 NBPF20Q3BBV1 942 aa19.28■□□□□ 0.68
SNAP29-203ENST00000490458 BTNL9Q6UXG8 535 aa19.28■□□□□ 0.68
SNAP29-203ENST00000490458 GPHNQ9NQX3 736 aaPredicted RBP19.28■□□□□ 0.68
SNAP29-203ENST00000490458 FRMPD2Q68DX3 1309 aaPredicted RBP19.27■□□□□ 0.68
SNAP29-203ENST00000490458 IQCF3P0C7M6 154 aa19.27■□□□□ 0.68
SNAP29-203ENST00000490458 CALML3P27482 149 aa19.27■□□□□ 0.68
SNAP29-203ENST00000490458 TAP1Q03518 808 aa19.27■□□□□ 0.68
SNAP29-203ENST00000490458 PPP2R5BQ15173 497 aa19.27■□□□□ 0.68
SNAP29-203ENST00000490458 VPS53Q5VIR6 699 aa19.27■□□□□ 0.68
SNAP29-203ENST00000490458 CLEC4DQ8WXI8 215 aa19.27■□□□□ 0.68
SNAP29-203ENST00000490458 COPS5Q92905 334 aa19.27■□□□□ 0.68
SNAP29-203ENST00000490458 C1QTNF1Q9BXJ1 281 aa19.27■□□□□ 0.68
SNAP29-203ENST00000490458 RAD50Q92878 1312 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 PITPNM1O00562 1244 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 ORC4O43929 436 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 NFRKBQ6P4R8 1299 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 RNF207Q6ZRF8 634 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 HERC6Q8IVU3 1022 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 PHOSPHO2Q8TCD6 241 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 ARNTL2Q8WYA1 636 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 FAM122AQ96E09 287 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 GPCPD1Q9NPB8 672 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 ANAPC4Q9UJX5 808 aa19.26■□□□□ 0.67
SNAP29-203ENST00000490458 NKRFO15226 690 aaKnown RBP eCLIP19.25■□□□□ 0.67
SNAP29-203ENST00000490458 EDNRBP24530 442 aa19.25■□□□□ 0.67
SNAP29-203ENST00000490458 PDE4DQ08499 809 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms