RNA–Protein interactions for RNA: ENST00000490108.1

TSC2-215, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-215ENST00000490108 DSCC1Q9BVC3 393 aa23.45■■□□□ 1.34
TSC2-215ENST00000490108 UBA5Q9GZZ9 404 aa23.45■■□□□ 1.34
TSC2-215ENST00000490108 SUPT16HQ9Y5B9 1047 aaKnown RBP23.45■■□□□ 1.34
TSC2-215ENST00000490108 CABYRO75952 493 aa23.44■■□□□ 1.34
TSC2-215ENST00000490108 IMMTQ16891 758 aaKnown RBP23.44■■□□□ 1.34
TSC2-215ENST00000490108 CCDC178Q5BJE1 867 aa23.44■■□□□ 1.34
TSC2-215ENST00000490108 NT5C2P49902 561 aa23.43■■□□□ 1.34
TSC2-215ENST00000490108 PPIGQ13427 754 aaKnown RBP eCLIP23.43■■□□□ 1.346e-7■■□□□ 13.8
TSC2-215ENST00000490108 MFSD5Q6N075 450 aa23.43■■□□□ 1.34
TSC2-215ENST00000490108 ZSCAN10Q96SZ4 725 aaPredicted RBP23.43■■□□□ 1.34
TSC2-215ENST00000490108 CTNNA3Q9UI47 895 aa23.43■■□□□ 1.34
TSC2-215ENST00000490108 PDE4AP27815 886 aa23.42■■□□□ 1.34
TSC2-215ENST00000490108 RPS6P62753 249 aaKnown RBP23.42■■□□□ 1.34
TSC2-215ENST00000490108 PDE4DQ08499 809 aa23.42■■□□□ 1.34
TSC2-215ENST00000490108 ITGA7Q13683 1181 aa23.42■■□□□ 1.34
TSC2-215ENST00000490108 CDC37Q16543 378 aaPredicted RBP23.42■■□□□ 1.34
TSC2-215ENST00000490108 ENAHQ8N8S7 591 aaPredicted RBP23.42■■□□□ 1.34
TSC2-215ENST00000490108 WDR11Q9BZH6 1224 aa23.42■■□□□ 1.34
TSC2-215ENST00000490108 Q9Y3F1 56 aa23.42■■□□□ 1.34
TSC2-215ENST00000490108 TNKSO95271 1327 aa23.41■■□□□ 1.34
TSC2-215ENST00000490108 LOC102724159A0A0B4J2E5 919 aa23.41■■□□□ 1.34
TSC2-215ENST00000490108 PSMC6P62333 389 aa23.41■■□□□ 1.34
TSC2-215ENST00000490108 PWP2Q15269 919 aaKnown RBP23.41■■□□□ 1.34
TSC2-215ENST00000490108 DUSP28Q4G0W2 176 aa23.41■■□□□ 1.34
TSC2-215ENST00000490108 TMEM199Q8N511 208 aa23.41■■□□□ 1.34
TSC2-215ENST00000490108 MPHOSPH6Q99547 160 aaKnown RBP23.41■■□□□ 1.34
TSC2-215ENST00000490108 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.41■■□□□ 1.347e-6■■□□□ 12.2
TSC2-215ENST00000490108 KRT23Q9C075 422 aa23.41■■□□□ 1.34
TSC2-215ENST00000490108 IL25Q9H293 177 aa23.41■■□□□ 1.34
TSC2-215ENST00000490108 SEMA6BQ9H3T3 888 aa23.41■■□□□ 1.34
TSC2-215ENST00000490108 DHX16O60231 1041 aaKnown RBP23.4■■□□□ 1.34
TSC2-215ENST00000490108 CD4P01730 458 aa23.4■■□□□ 1.34
TSC2-215ENST00000490108 GSPT1P15170 499 aaKnown RBP23.4■■□□□ 1.34
TSC2-215ENST00000490108 CSF2RAP15509 400 aa23.4■■□□□ 1.34
TSC2-215ENST00000490108 TTC22Q5TAA0 569 aa23.4■■□□□ 1.34
TSC2-215ENST00000490108 SLC43A3Q8NBI5 491 aa23.4■■□□□ 1.34
TSC2-215ENST00000490108 CDX2Q99626 313 aaPredicted RBP23.4■■□□□ 1.34
TSC2-215ENST00000490108 UBAC1Q9BSL1 405 aa23.4■■□□□ 1.34
TSC2-215ENST00000490108 TTYH1Q9H313 450 aaPredicted RBP23.4■■□□□ 1.34
TSC2-215ENST00000490108 ZSWIM5Q9P217 1185 aa23.4■■□□□ 1.34
TSC2-215ENST00000490108 GRIN2DO15399 1336 aa23.39■■□□□ 1.34
TSC2-215ENST00000490108 ACRP10323 421 aa23.39■■□□□ 1.33
TSC2-215ENST00000490108 CYP2C18P33260 490 aa23.39■■□□□ 1.33
TSC2-215ENST00000490108 IRX6P78412 446 aaPredicted RBP23.39■■□□□ 1.33
TSC2-215ENST00000490108 ASPRV1Q53RT3 343 aa23.39■■□□□ 1.33
TSC2-215ENST00000490108 OR6J1Q8NGC5 347 aa23.39■■□□□ 1.33
TSC2-215ENST00000490108 ANKS1AQ92625 1134 aa23.39■■□□□ 1.33
TSC2-215ENST00000490108 CNNM2Q9H8M5 875 aa23.39■■□□□ 1.33
TSC2-215ENST00000490108 DLL1O00548 723 aa23.38■■□□□ 1.33
TSC2-215ENST00000490108 MYL3P08590 195 aa23.38■■□□□ 1.33
TSC2-215ENST00000490108 PARP1P09874 1014 aaKnown RBP23.38■■□□□ 1.33
TSC2-215ENST00000490108 PPP2R5BQ15173 497 aa23.38■■□□□ 1.33
TSC2-215ENST00000490108 ADGRF4Q8IZF3 695 aa23.38■■□□□ 1.33
TSC2-215ENST00000490108 DNERQ8NFT8 737 aa23.38■■□□□ 1.33
TSC2-215ENST00000490108 TRPV6Q9H1D0 765 aa23.38■■□□□ 1.33
TSC2-215ENST00000490108 HIPK3Q9H422 1215 aa23.38■■□□□ 1.33
TSC2-215ENST00000490108 ABCB11O95342 1321 aa23.37■■□□□ 1.33
TSC2-215ENST00000490108 RBM47A0AV96 593 aaKnown RBP23.37■■□□□ 1.33
TSC2-215ENST00000490108 EDNRBP24530 442 aa23.37■■□□□ 1.33
TSC2-215ENST00000490108 CPT1AP50416 773 aa23.37■■□□□ 1.33
TSC2-215ENST00000490108 TMEM240Q5SV17 173 aa23.37■■□□□ 1.33
TSC2-215ENST00000490108 IFIT1BQ5T764 474 aaKnown RBP23.37■■□□□ 1.33
TSC2-215ENST00000490108 C16orf59Q7L2K0 433 aa23.37■■□□□ 1.33
TSC2-215ENST00000490108 MYLIPQ8WY64 445 aa23.37■■□□□ 1.33
TSC2-215ENST00000490108 POLR3EQ9NVU0 708 aa23.37■■□□□ 1.33
TSC2-215ENST00000490108 UMODL1Q5DID0 1318 aa23.36■■□□□ 1.33
TSC2-215ENST00000490108 RAD50Q92878 1312 aa23.36■■□□□ 1.33
TSC2-215ENST00000490108 CDH23Q9H251 3354 aa23.36■■□□□ 1.33
TSC2-215ENST00000490108 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.36■■□□□ 1.33
TSC2-215ENST00000490108 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.36■■□□□ 1.33
TSC2-215ENST00000490108 B4GALT4O60513 344 aa23.36■■□□□ 1.33
TSC2-215ENST00000490108 QRICH1Q2TAL8 776 aa23.36■■□□□ 1.33
TSC2-215ENST00000490108 PSRC1Q6PGN9 363 aaPredicted RBP23.36■■□□□ 1.33
TSC2-215ENST00000490108 SCFD2Q8WU76 684 aa23.36■■□□□ 1.33
TSC2-215ENST00000490108 VAT1LQ9HCJ6 419 aa23.36■■□□□ 1.33
TSC2-215ENST00000490108 MYH6P13533 1939 aa23.35■■□□□ 1.33
TSC2-215ENST00000490108 B4DLN1 442 aa23.35■■□□□ 1.33
TSC2-215ENST00000490108 DNAJB2P25686 324 aa23.35■■□□□ 1.33
TSC2-215ENST00000490108 MRPL12P52815 198 aaKnown RBP23.35■■□□□ 1.33
TSC2-215ENST00000490108 ZNF365Q70YC5 407 aa23.35■■□□□ 1.33
TSC2-215ENST00000490108 RGS22Q8NE09 1264 aa23.35■■□□□ 1.33
TSC2-215ENST00000490108 COPS5Q92905 334 aa23.35■■□□□ 1.33
TSC2-215ENST00000490108 SEZ6LQ9BYH1 1024 aa23.35■■□□□ 1.33
TSC2-215ENST00000490108 TMEM265A0A087WTH1 108 aa23.34■■□□□ 1.33
TSC2-215ENST00000490108 NKRFO15226 690 aaKnown RBP eCLIP23.34■■□□□ 1.33
TSC2-215ENST00000490108 CCL23P55773 120 aa23.34■■□□□ 1.33
TSC2-215ENST00000490108 PURAQ00577 322 aaKnown RBP23.34■■□□□ 1.33
TSC2-215ENST00000490108 BRDTQ58F21 947 aaPredicted RBP23.34■■□□□ 1.33
TSC2-215ENST00000490108 FBXO11Q86XK2 927 aa23.34■■□□□ 1.33
TSC2-215ENST00000490108 SYTL5Q8TDW5 730 aaPredicted RBP23.34■■□□□ 1.33
TSC2-215ENST00000490108 TBC1D5Q92609 795 aa23.34■■□□□ 1.33
TSC2-215ENST00000490108 MTG1Q9BT17 334 aaPredicted RBP23.34■■□□□ 1.33
TSC2-215ENST00000490108 NOC4LQ9BVI4 516 aaKnown RBP23.34■■□□□ 1.33
TSC2-215ENST00000490108 ALDH8A1Q9H2A2 487 aaPredicted RBP23.34■■□□□ 1.33
TSC2-215ENST00000490108 JMJD4Q9H9V9 463 aa23.34■■□□□ 1.33
TSC2-215ENST00000490108 IL23AQ9NPF7 189 aa23.34■■□□□ 1.33
TSC2-215ENST00000490108 GPHNQ9NQX3 736 aaPredicted RBP23.34■■□□□ 1.33
TSC2-215ENST00000490108 TXNP10599 105 aaKnown RBP23.33■■□□□ 1.33
TSC2-215ENST00000490108 CYB5R4Q7L1T6 521 aa23.33■■□□□ 1.33
TSC2-215ENST00000490108 MAFAQ8NHW3 353 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms