RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 GTF2A2P52657 109 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 ATP2C1P98194 919 aaPredicted RBP16.14■□□□□ 0.17
VPS26A-205ENST00000489656 TKFCQ3LXA3 575 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 GPAT2Q6NUI2 795 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 USP17L6PQ6QN14 398 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 TBCKQ8TEA7 893 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 AGBL1Q96MI9 1066 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 RAVER2Q9HCJ3 691 aaKnown RBP16.14■□□□□ 0.17
VPS26A-205ENST00000489656 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.14■□□□□ 0.17
VPS26A-205ENST00000489656 ZNF214Q9UL59 606 aaPredicted RBP16.14■□□□□ 0.17
VPS26A-205ENST00000489656 PCDHA7Q9UN72 937 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 SLC45A1Q9Y2W3 748 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 KIAA1217Q5T5P2 1943 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 GOLGA6L4A6NEF3 574 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 GCOM1H8Y6P7 765 aaPredicted RBP16.13■□□□□ 0.17
VPS26A-205ENST00000489656 CUTAO60888 179 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 POLR2MP0CAP2 368 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 CETPP11597 493 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 TAL1P17542 331 aaPredicted RBP16.13■□□□□ 0.17
VPS26A-205ENST00000489656 PTPREP23469 700 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 HSD17B4P51659 736 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 AXDND1Q5T1B0 1012 aaPredicted RBP16.13■□□□□ 0.17
VPS26A-205ENST00000489656 SPRYD7Q5W111 196 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 MCF2L2Q86YR7 1114 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 CRYGNQ8WXF5 182 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 CLEC4DQ8WXI8 215 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 MS4A4AQ96JQ5 239 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 NAP1L4Q99733 375 aaKnown RBP16.13■□□□□ 0.17
VPS26A-205ENST00000489656 ANO3Q9BYT9 981 aa16.13■□□□□ 0.17
VPS26A-205ENST00000489656 SPDYE3A6NKU9 549 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 LAD1O00515 517 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 ATP2B1P20020 1258 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 USP11P51784 963 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 IRX3P78415 501 aaPredicted RBP16.12■□□□□ 0.17
VPS26A-205ENST00000489656 TMEM132BQ14DG7 1078 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 ZNF174Q15697 407 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 ARL6IP4Q66PJ3 421 aaKnown RBP16.12■□□□□ 0.17
VPS26A-205ENST00000489656 MOXD1Q6UVY6 613 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 C4orf32Q8N8J7 132 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 KRI1Q8N9T8 703 aaKnown RBP16.12■□□□□ 0.17
VPS26A-205ENST00000489656 SMC1BQ8NDV3 1235 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 FERMT2Q96AC1 680 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 TEX13BQ9BXU2 312 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 ASCC2Q9H1I8 757 aaPredicted RBP16.12■□□□□ 0.17
VPS26A-205ENST00000489656 FBXO2Q9UK22 296 aaPredicted RBP16.12■□□□□ 0.17
VPS26A-205ENST00000489656 SRPRBQ9Y5M8 271 aaKnown RBP16.12■□□□□ 0.17
VPS26A-205ENST00000489656 PLXNB2O15031 1838 aa16.12■□□□□ 0.17
VPS26A-205ENST00000489656 EDIL3O43854 480 aa16.11■□□□□ 0.17
VPS26A-205ENST00000489656 ALAS1P13196 640 aa16.11■□□□□ 0.17
VPS26A-205ENST00000489656 GCFC2P16383 781 aaKnown RBP16.11■□□□□ 0.17
VPS26A-205ENST00000489656 OSBPP22059 807 aa16.11■□□□□ 0.17
VPS26A-205ENST00000489656 MARCKSP29966 332 aaPredicted RBP16.11■□□□□ 0.17
VPS26A-205ENST00000489656 SREBF1P36956 1147 aa16.11■□□□□ 0.17
VPS26A-205ENST00000489656 HUNKP57058 714 aa16.11■□□□□ 0.17
VPS26A-205ENST00000489656 HERVK_113P62684 666 aa16.11■□□□□ 0.17
VPS26A-205ENST00000489656 PTGDRQ13258 359 aa16.11■□□□□ 0.17
VPS26A-205ENST00000489656 PPP4R3AQ6IN85 833 aa16.11■□□□□ 0.17
VPS26A-205ENST00000489656 ZNF579Q8NAF0 562 aaKnown RBP16.11■□□□□ 0.17
VPS26A-205ENST00000489656 GTF3C2Q8WUA4 911 aaPredicted RBP16.11■□□□□ 0.17
VPS26A-205ENST00000489656 P2RX7Q99572 595 aaKnown RBP16.11■□□□□ 0.17
VPS26A-205ENST00000489656 PLXNA1Q9UIW2 1896 aa16.11■□□□□ 0.17
VPS26A-205ENST00000489656 WDR81Q562E7 1941 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 CYP3A7-CYP3A51PA0A087WV96 503 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 FAM237AA0A1B0GTK4 181 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 CFBP00751 764 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 CMA1P23946 247 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 CYP3A7P24462 503 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 MCM7P33993 719 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 PRPHP41219 470 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 SNRNP48Q6IEG0 339 aaKnown RBP16.1■□□□□ 0.17
VPS26A-205ENST00000489656 ANKRD23Q86SG2 305 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 SAPCD2Q86UD0 394 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 MRPS27Q92552 414 aaKnown RBP16.1■□□□□ 0.17
VPS26A-205ENST00000489656 MBOAT7Q96N66 472 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 ANP32EQ9BTT0 268 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 EHMT1Q9H9B1 1298 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 RNF146Q9NTX7 359 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
VPS26A-205ENST00000489656 LRRC37A2A6NM11 1700 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 CCL15-CCL14A0A0B4J2E2 113 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 TESPA1A2RU30 521 aaPredicted RBP16.09■□□□□ 0.17
VPS26A-205ENST00000489656 NFIBO00712 420 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 CCNT1O60563 726 aaKnown RBP16.09■□□□□ 0.17
VPS26A-205ENST00000489656 TOMM70O94826 608 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 CYP3A4P08684 503 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 HOXA13P31271 388 aaPredicted RBP16.09■□□□□ 0.17
VPS26A-205ENST00000489656 STAT3P40763 770 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 CCL15Q16663 113 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 MUM1L1Q5H9M0 696 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 RESP18Q5W5W9 173 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 POTEEQ6S8J3 1075 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.09■□□□□ 0.17
VPS26A-205ENST00000489656 RASAL3Q86YV0 1011 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 RIOX2Q8IUF8 465 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 CCAR1Q8IX12 1150 aaKnown RBP16.09■□□□□ 0.17
VPS26A-205ENST00000489656 CHST13Q8NET6 341 aa16.09■□□□□ 0.17
VPS26A-205ENST00000489656 TBC1D5Q92609 795 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms