RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 A0A1W2PQ27 194 aa23.77■■□□□ 1.4
SND1-214ENST00000489417 A0A1W2PQ64 194 aa23.77■■□□□ 1.4
SND1-214ENST00000489417 A0A1W2PQD8 194 aa23.77■■□□□ 1.4
SND1-214ENST00000489417 SPDYE3A6NKU9 549 aa23.77■■□□□ 1.4
SND1-214ENST00000489417 CUTAO60888 179 aa23.77■■□□□ 1.4
SND1-214ENST00000489417 ATP2C1P98194 919 aaPredicted RBP23.77■■□□□ 1.4
SND1-214ENST00000489417 MKRN3Q13064 507 aaKnown RBP23.77■■□□□ 1.4
SND1-214ENST00000489417 ORC2Q13416 577 aaPredicted RBP23.77■■□□□ 1.4
SND1-214ENST00000489417 AXDND1Q5T1B0 1012 aaPredicted RBP23.77■■□□□ 1.4
SND1-214ENST00000489417 SNRNP48Q6IEG0 339 aaKnown RBP23.77■■□□□ 1.4
SND1-214ENST00000489417 LBX2Q6XYB7 198 aa23.77■■□□□ 1.4
SND1-214ENST00000489417 MB21D1Q8N884 522 aa23.77■■□□□ 1.4
SND1-214ENST00000489417 KRI1Q8N9T8 703 aaKnown RBP23.77■■□□□ 1.4
SND1-214ENST00000489417 TBC1D5Q92609 795 aa23.77■■□□□ 1.4
SND1-214ENST00000489417 MS4A4AQ96JQ5 239 aa23.77■■□□□ 1.4
SND1-214ENST00000489417 TEX13BQ9BXU2 312 aa23.77■■□□□ 1.4
SND1-214ENST00000489417 CCL15-CCL14A0A0B4J2E2 113 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 NFIBO00712 420 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 PTGDRQ13258 359 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 CCL15Q16663 113 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 TKFCQ3LXA3 575 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 MUM1L1Q5H9M0 696 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 TRERF1Q96PN7 1200 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 HOMER2Q9NSB8 354 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 RNF146Q9NTX7 359 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 FBXO2Q9UK22 296 aaPredicted RBP23.76■■□□□ 1.39
SND1-214ENST00000489417 CCNT1O60563 726 aaKnown RBP23.76■■□□□ 1.39
SND1-214ENST00000489417 PTPREP23469 700 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 HSD17B4P51659 736 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 HERVK_113P62684 666 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 GHRHRQ02643 423 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 CCAR1Q8IX12 1150 aaKnown RBP23.76■■□□□ 1.39
SND1-214ENST00000489417 SAMD3Q8N6K7 520 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 MRVI1Q9Y6F6 885 aa23.76■■□□□ 1.39
SND1-214ENST00000489417 SMCHD1A6NHR9 2005 aa23.75■■□□□ 1.39
SND1-214ENST00000489417 STAT3P40763 770 aa23.75■■□□□ 1.39
SND1-214ENST00000489417 PLS1Q14651 629 aa23.75■■□□□ 1.39
SND1-214ENST00000489417 FCHSD1Q86WN1 690 aa23.75■■□□□ 1.39
SND1-214ENST00000489417 C4orf32Q8N8J7 132 aa23.75■■□□□ 1.39
SND1-214ENST00000489417 NAP1L4Q99733 375 aaKnown RBP23.75■■□□□ 1.39
SND1-214ENST00000489417 RIPK3Q9Y572 518 aa23.75■■□□□ 1.39
SND1-214ENST00000489417 SRPRBQ9Y5M8 271 aaKnown RBP23.75■■□□□ 1.39
SND1-214ENST00000489417 RBBP6Q7Z6E9 1792 aaKnown RBP23.74■■□□□ 1.39
SND1-214ENST00000489417 EDIL3O43854 480 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 LIG1P18858 919 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 SREBF1P36956 1147 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 POTEEQ6S8J3 1075 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 SAPCD2Q86UD0 394 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 RASAL3Q86YV0 1011 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 FSIP1Q8NA03 581 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 BRI3BPQ8WY22 251 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 MRPS27Q92552 414 aaKnown RBP23.74■■□□□ 1.39
SND1-214ENST00000489417 FERMT2Q96AC1 680 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 CLIC6Q96NY7 704 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 EHMT1Q9H9B1 1298 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 MAP3K20Q9NYL2 800 aaKnown RBP23.74■■□□□ 1.39
SND1-214ENST00000489417 BTBD7Q9P203 1132 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 PNMA3Q9UL41 463 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 SLC45A1Q9Y2W3 748 aa23.74■■□□□ 1.39
SND1-214ENST00000489417 LAD1O00515 517 aa23.73■■□□□ 1.39
SND1-214ENST00000489417 NEMFO60524 1076 aa23.73■■□□□ 1.39
SND1-214ENST00000489417 GCFC2P16383 781 aaKnown RBP23.73■■□□□ 1.39
SND1-214ENST00000489417 USP11P51784 963 aa23.73■■□□□ 1.39
SND1-214ENST00000489417 ZNF157P51786 506 aaPredicted RBP23.73■■□□□ 1.39
SND1-214ENST00000489417 ARHGAP4P98171 946 aa23.73■■□□□ 1.39
SND1-214ENST00000489417 CAVIN1Q6NZI2 390 aaKnown RBP23.73■■□□□ 1.39
SND1-214ENST00000489417 ANKRD23Q86SG2 305 aa23.73■■□□□ 1.39
SND1-214ENST00000489417 CRYGNQ8WXF5 182 aa23.73■■□□□ 1.39
SND1-214ENST00000489417 BTBD19C9JJ37 291 aa23.72■■□□□ 1.39
SND1-214ENST00000489417 TDP2O95551 362 aa23.72■■□□□ 1.39
SND1-214ENST00000489417 CMA1P23946 247 aa23.72■■□□□ 1.39
SND1-214ENST00000489417 ARL6IP4Q66PJ3 421 aaKnown RBP23.72■■□□□ 1.39
SND1-214ENST00000489417 PPP4R3AQ6IN85 833 aa23.72■■□□□ 1.39
SND1-214ENST00000489417 RGMBQ6NW40 437 aa23.72■■□□□ 1.39
SND1-214ENST00000489417 CCDC73Q6ZRK6 1079 aa23.72■■□□□ 1.39
SND1-214ENST00000489417 TMEM60Q9H2L4 133 aa23.72■■□□□ 1.39
SND1-214ENST00000489417 GOLPH3LQ9H4A5 285 aa23.72■■□□□ 1.39
SND1-214ENST00000489417 TLL2Q9Y6L7 1015 aa23.72■■□□□ 1.39
SND1-214ENST00000489417 PDHXO00330 501 aa23.71■■□□□ 1.39
SND1-214ENST00000489417 CNMDO75829 334 aa23.71■■□□□ 1.39
SND1-214ENST00000489417 TOMM70O94826 608 aa23.71■■□□□ 1.39
SND1-214ENST00000489417 GRIN1Q05586 938 aa23.71■■□□□ 1.39
SND1-214ENST00000489417 RIOX2Q8IUF8 465 aa23.71■■□□□ 1.39
SND1-214ENST00000489417 ZNF579Q8NAF0 562 aaKnown RBP23.71■■□□□ 1.39
SND1-214ENST00000489417 PAGR1Q9BTK6 254 aa23.71■■□□□ 1.39
SND1-214ENST00000489417 ACAD9Q9H845 621 aa23.71■■□□□ 1.39
SND1-214ENST00000489417 OR52Z1P0C646 297 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 RESP18Q5W5W9 173 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 SHC4Q6S5L8 630 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 MOXD1Q6UVY6 613 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 NSMFQ6X4W1 530 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 RNF207Q6ZRF8 634 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 CHST13Q8NET6 341 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 SYTL5Q8TDW5 730 aaPredicted RBP23.7■■□□□ 1.38
SND1-214ENST00000489417 GTF3C2Q8WUA4 911 aaPredicted RBP23.7■■□□□ 1.38
SND1-214ENST00000489417 SYAP1Q96A49 352 aaPredicted RBP23.7■■□□□ 1.38
SND1-214ENST00000489417 ANP32EQ9BTT0 268 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 MAF1Q9H063 256 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 SPATC1LQ9H0A9 340 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 TMEM63CQ9P1W3 806 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms