RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 NFIBO00712 420 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 POLR2MP0CAP2 368 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 ATP2B1P20020 1258 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 HERVK_113P62684 666 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 GHRHRQ02643 423 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 SLC39A14Q15043 492 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 STK38Q15208 465 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 INF2Q27J81 1249 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 TKFCQ3LXA3 575 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 TTC38Q5R3I4 469 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 KCNG4Q8TDN1 519 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 TBCKQ8TEA7 893 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 PGBD1Q96JS3 809 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
CMSS1-205ENST00000489081 RIPK3Q9Y572 518 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 PARP14Q460N5 1801 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 SPTLC2O15270 562 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 EDIL3O43854 480 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
CMSS1-205ENST00000489081 CFBP00751 764 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 FOSP01100 380 aaPredicted RBP13.12□□□□□ -0.31
CMSS1-205ENST00000489081 SLC10A3P09131 477 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 HOXA13P31271 388 aaPredicted RBP13.12□□□□□ -0.31
CMSS1-205ENST00000489081 STAT3P40763 770 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 HSD17B4P51659 736 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 SNRNP48Q6IEG0 339 aaKnown RBP13.12□□□□□ -0.31
CMSS1-205ENST00000489081 NEK8Q86SG6 692 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 MCF2L2Q86YR7 1114 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 SAMD3Q8N6K7 520 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 ANO3Q9BYT9 981 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 BTBD7Q9P203 1132 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 CEP131Q9UPN4 1083 aa13.12□□□□□ -0.31
CMSS1-205ENST00000489081 MORC2Q9Y6X9 1032 aaPredicted RBP13.12□□□□□ -0.31
CMSS1-205ENST00000489081 PDHXO00330 501 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 PPP6R2O75170 966 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 CNMDO75829 334 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 BMP15O95972 392 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 UBE2HP62256 183 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 ZNF174Q15697 407 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 RIOX2Q8IUF8 465 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 FAM43AQ8N2R8 423 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 HHIPL1Q96JK4 782 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 PTPN18Q99952 460 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
CMSS1-205ENST00000489081 ABT1Q9ULW3 272 aaKnown RBP13.11□□□□□ -0.31
CMSS1-205ENST00000489081 MYH15Q9Y2K3 1946 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 MANSC4A6NHS7 340 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-205ENST00000489081 SPDYE3A6NKU9 549 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 FAM155AB1AL88 458 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-205ENST00000489081 PEX10O60683 326 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 MCM7P33993 719 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 SREBF1P36956 1147 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 PLS1Q14651 629 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 LETM2Q2VYF4 491 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 GTF3C2Q8WUA4 911 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-205ENST00000489081 CRYGNQ8WXF5 182 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 PAGR1Q9BTK6 254 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 SPATC1LQ9H0A9 340 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 TXNRD2Q9NNW7 524 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 MAP3K20Q9NYL2 800 aaKnown RBP13.1□□□□□ -0.31
CMSS1-205ENST00000489081 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 PCDHA7Q9UN72 937 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 RABGAP1Q9Y3P9 1069 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
CMSS1-205ENST00000489081 TRAK2O60296 914 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 CYP2C8P10632 490 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 MARCKSP29966 332 aaPredicted RBP13.09□□□□□ -0.31
CMSS1-205ENST00000489081 ME1P48163 572 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 ARHGAP4P98171 946 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 ATP2C1P98194 919 aaPredicted RBP13.09□□□□□ -0.31
CMSS1-205ENST00000489081 ORC2Q13416 577 aaPredicted RBP13.09□□□□□ -0.31
CMSS1-205ENST00000489081 FCHSD1Q86WN1 690 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 C4orf32Q8N8J7 132 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 JMYQ8N9B5 988 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 CHST13Q8NET6 341 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 GPT2Q8TD30 523 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 SYTL5Q8TDW5 730 aaPredicted RBP13.09□□□□□ -0.31
CMSS1-205ENST00000489081 CCDC102AQ96A19 550 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
CMSS1-205ENST00000489081 MAF1Q9H063 256 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 ACAD9Q9H845 621 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 COL20A1Q9P218 1284 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 TCHHQ07283 1943 aa13.09□□□□□ -0.31
CMSS1-205ENST00000489081 SMCHD1A6NHR9 2005 aa13.08□□□□□ -0.31
CMSS1-205ENST00000489081 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
CMSS1-205ENST00000489081 CCNT1O60563 726 aaKnown RBP13.08□□□□□ -0.32
CMSS1-205ENST00000489081 TDP2O95551 362 aa13.08□□□□□ -0.32
CMSS1-205ENST00000489081 SLC25A27O95847 323 aa13.08□□□□□ -0.32
CMSS1-205ENST00000489081 GCFC2P16383 781 aaKnown RBP13.08□□□□□ -0.32
CMSS1-205ENST00000489081 PTPREP23469 700 aa13.08□□□□□ -0.32
CMSS1-205ENST00000489081 USP11P51784 963 aa13.08□□□□□ -0.32
CMSS1-205ENST00000489081 RPS6P62753 249 aaKnown RBP13.08□□□□□ -0.32
CMSS1-205ENST00000489081 PTGDRQ13258 359 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms