RNA–Protein interactions for RNA: ENST00000488944.5

WDR46-238, Transcript of WD repeat domain 46, human

TSL 3

Gene WDR46, Length 538 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-238	ENST00000488944	ZKSCAN3	Q9BRR0	538 aa		15.18	■□□□□ 0.02
WDR46-238	ENST00000488944	TRPV6	Q9H1D0	765 aa		15.18	■□□□□ 0.02
WDR46-238	ENST00000488944	NEDD4	P46934	1319 aa		15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	B4GALT4	O60513	344 aa		15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	CABYR	O75952	493 aa		15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	CCL23	P55773	120 aa		15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	ZNF543	Q08ER8	600 aa		15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	TIFA	Q96CG3	184 aa		15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	YTHDC1	Q96MU7	727 aa	Known RBP	15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	CPVL	Q9H3G5	476 aa		15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	HIPK3	Q9H422	1215 aa		15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	ZNF576	Q9H609	170 aa		15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	ADD3	Q9UEY8	706 aa	Known RBP	15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	MYH6	P13533	1939 aa		15.17	■□□□□ 0.02
WDR46-238	ENST00000488944	ZEB2	O60315	1214 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	GOLGA8H	P0CJ92	632 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	SDS	P20132	328 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	DUSP28	Q4G0W2	176 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	RASIP1	Q5U651	963 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	PSRC1	Q6PGN9	363 aa	Predicted RBP	15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	RNF207	Q6ZRF8	634 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	SMC5	Q8IY18	1101 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	PBX4	Q9BYU1	374 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	WDR11	Q9BZH6	1224 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	IL23A	Q9NPF7	189 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	CXXC1	Q9P0U4	656 aa	Predicted RBP	15.16	■□□□□ 0.02
WDR46-238	ENST00000488944		Q9Y3F1	56 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	SCN5A	Q14524	2016 aa		15.16	■□□□□ 0.02
WDR46-238	ENST00000488944	IGHD	P01880	384 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	SNHG28	P0DPA3	235 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	RPS6	P62753	249 aa	Known RBP	15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	USH1G	Q495M9	461 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	TICAM2	Q86XR7	235 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	PLEKHM2	Q8IWE5	1019 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	USP38	Q8NB14	1042 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	PPP1R13L	Q8WUF5	828 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	TTC14	Q96N46	770 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	NOC4L	Q9BVI4	516 aa	Known RBP	15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	UBA5	Q9GZZ9	404 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	WNT8A	Q9H1J5	351 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	SCN10A	Q9Y5Y9	1956 aa		15.15	■□□□□ 0.02
WDR46-238	ENST00000488944	MYL3	P08590	195 aa		15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	PC	P11498	1178 aa	Known RBP	15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	PDE4D	Q08499	809 aa		15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	CWC27	Q6UX04	472 aa	Known RBP	15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	OTOP2	Q7RTS6	562 aa		15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	CHD1L	Q86WJ1	897 aa		15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	OR6J1	Q8NGC5	347 aa		15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	ESR2	Q92731	530 aa		15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	COPS5	Q92905	334 aa		15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	SCLY	Q96I15	445 aa		15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	RWDD1	Q9H446	243 aa	Predicted RBP	15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	RNF41	Q9H4P4	317 aa	Predicted RBP	15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	WDR19	Q8NEZ3	1342 aa		15.14	■□□□□ 0.01
WDR46-238	ENST00000488944	RBM47	A0AV96	593 aa	Known RBP	15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	ZNF213	O14771	459 aa		15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	KDM4A	O75164	1064 aa		15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	FGB	P02675	491 aa		15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	CYP2C9	P11712	490 aa		15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	VCAN	P13611	3396 aa		15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	MFAP1	P55081	439 aa	Known RBP	15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	PURA	Q00577	322 aa	Known RBP	15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	HERVK_113	Q902F9	699 aa		15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	PRDM12	Q9H4Q4	367 aa		15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	DIAPH3	Q9NSV4	1193 aa		15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	TRMT13	Q9NUP7	481 aa	Known RBP	15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	POLR3E	Q9NVU0	708 aa		15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	CHD9	Q3L8U1	2897 aa		15.13	■□□□□ 0.01
WDR46-238	ENST00000488944	LOC102724159	A0A0B4J2E5	919 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944		B4E1Z4	1266 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	EDNRB	P24530	442 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	CPT1A	P50416	773 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	NUCB1	Q02818	461 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	PPP2R5B	Q15173	497 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	PWP2	Q15269	919 aa	Known RBP	15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	FAM47C	Q5HY64	1035 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	GPATCH4	Q5T3I0	446 aa	Known RBP	15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	PNMA1	Q8ND90	353 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	EXOC6	Q8TAG9	804 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	TBC1D5	Q92609	795 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	NKX2-4	Q9H2Z4	354 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	OSBPL3	Q9H4L5	887 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	TNKS	O95271	1327 aa		15.12	■□□□□ 0.01
WDR46-238	ENST00000488944	ARIH2	O95376	493 aa		15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	CDC37	Q16543	378 aa	Predicted RBP	15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	DGKH	Q86XP1	1220 aa		15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	SCFD2	Q8WU76	684 aa		15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	PPM1E	Q8WY54	764 aa		15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	VWCE	Q96DN2	955 aa		15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	MTG1	Q9BT17	334 aa	Predicted RBP	15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	SEZ6L	Q9BYH1	1024 aa		15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	MTIF3	Q9H2K0	278 aa	Known RBP	15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	PRDM6	Q9NQX0	595 aa		15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	PNMA2	Q9UL42	364 aa		15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	YBX2	Q9Y2T7	364 aa	Known RBP	15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	TTC28	Q96AY4	2481 aa		15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	KIAA1217	Q5T5P2	1943 aa		15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	TRIP12	Q14669	1992 aa	Predicted RBP	15.11	■□□□□ 0.01
WDR46-238	ENST00000488944	TXN	P10599	105 aa	Known RBP	15.1	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms