RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 GLIS2Q9BZE0 524 aaPredicted RBP10.86□□□□□ -0.67
POLR1A-208ENST00000486964 XPO4Q9C0E2 1151 aaKnown RBP10.86□□□□□ -0.67
POLR1A-208ENST00000486964 KIAA1683Q9H0B3 1180 aa10.86□□□□□ -0.67
POLR1A-208ENST00000486964 L2HGDHQ9H9P8 463 aa10.86□□□□□ -0.67
POLR1A-208ENST00000486964 GGA3Q9NZ52 723 aa10.86□□□□□ -0.67
POLR1A-208ENST00000486964 IFNKQ9P0W0 207 aa10.86□□□□□ -0.67
POLR1A-208ENST00000486964 SEC63Q9UGP8 760 aaKnown RBP10.86□□□□□ -0.67
POLR1A-208ENST00000486964 DDX41Q9UJV9 622 aaKnown RBP10.86□□□□□ -0.67
POLR1A-208ENST00000486964 PRDM4Q9UKN5 801 aa10.86□□□□□ -0.67
POLR1A-208ENST00000486964 HPSEQ9Y251 543 aa10.86□□□□□ -0.67
POLR1A-208ENST00000486964 GLTPD2A6NH11 291 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 TRIM75PA6NK02 468 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 POTECB2RU33 542 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 ZSCAN12O43309 604 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 GNA11P29992 359 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 CCDC96Q2M329 555 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 QRICH1Q2TAL8 776 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 CT47A1Q5JQC4 288 aaPredicted RBP10.85□□□□□ -0.67
POLR1A-208ENST00000486964 NOL9Q5SY16 702 aaKnown RBP10.85□□□□□ -0.67
POLR1A-208ENST00000486964 RESP18Q5W5W9 173 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 DPY19L2Q6NUT2 758 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 USP50Q70EL3 339 aaPredicted RBP10.85□□□□□ -0.67
POLR1A-208ENST00000486964 KRT222Q8N1A0 295 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 ZC3H15Q8WU90 426 aaKnown RBP10.85□□□□□ -0.67
POLR1A-208ENST00000486964 COA7Q96BR5 231 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 KLRG1Q96E93 195 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 PPP1R13BQ96KQ4 1090 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 NUP88Q99567 741 aaPredicted RBP10.85□□□□□ -0.67
POLR1A-208ENST00000486964 C6orf50Q9HD87 102 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 RIC8AQ9NPQ8 531 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.85□□□□□ -0.67
POLR1A-208ENST00000486964 FBXO2Q9UK22 296 aaPredicted RBP10.85□□□□□ -0.67
POLR1A-208ENST00000486964 CEP131Q9UPN4 1083 aa10.85□□□□□ -0.67
POLR1A-208ENST00000486964 SRPRBQ9Y5M8 271 aaKnown RBP10.85□□□□□ -0.67
POLR1A-208ENST00000486964 TMEM232C9JQI7 657 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 USP2O75604 605 aaPredicted RBP10.84□□□□□ -0.67
POLR1A-208ENST00000486964 BMP15O95972 392 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 LMOD1P29536 600 aaPredicted RBP10.84□□□□□ -0.67
POLR1A-208ENST00000486964 INPP5BP32019 993 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 NAPAP54920 295 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 FANCCQ00597 558 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 SUPT20HL1Q3ZLR7 823 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 SYDE2Q5VT97 1194 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 KANK3Q6NY19 840 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 SHC4Q6S5L8 630 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 PIK3AP1Q6ZUJ8 805 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 HOMER1Q86YM7 354 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 TEX2Q8IWB9 1127 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 SCYL3Q8IZE3 742 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 TRIML1Q8N9V2 468 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 SH2D4AQ9H788 454 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 GOPCQ9HD26 462 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 ARGLU1Q9NWB6 273 aaPredicted RBP10.84□□□□□ -0.67
POLR1A-208ENST00000486964 SSC5DA1L4H1 1573 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 TOMM70O94826 608 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 PTPRAP18433 802 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 MARCKSP29966 332 aaPredicted RBP10.84□□□□□ -0.67
POLR1A-208ENST00000486964 ATP2C1P98194 919 aaPredicted RBP10.84□□□□□ -0.67
POLR1A-208ENST00000486964 NCAPHQ15003 741 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 TTC38Q5R3I4 469 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 PRAMEF18Q5VWM3 479 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 KRT25Q7Z3Z0 450 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 KRI1Q8N9T8 703 aaKnown RBP10.84□□□□□ -0.67
POLR1A-208ENST00000486964 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.84□□□□□ -0.67
POLR1A-208ENST00000486964 RASGRP4Q8TDF6 673 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 CHURC1Q8WUH1 139 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 FEM1BQ9UK73 627 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 ZNF215Q9UL58 517 aaPredicted RBP10.84□□□□□ -0.67
POLR1A-208ENST00000486964 PRR12Q9ULL5 1215 aa10.84□□□□□ -0.67
POLR1A-208ENST00000486964 USP27XA6NNY8 438 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 ARHGAP6O43182 974 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 SERPINC1P01008 464 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 GRIN1Q05586 938 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 ZNF174Q15697 407 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 CDC37Q16543 378 aaPredicted RBP10.83□□□□□ -0.68
POLR1A-208ENST00000486964 FAM83BQ5T0W9 1011 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 E4F1Q66K89 784 aaPredicted RBP10.83□□□□□ -0.68
POLR1A-208ENST00000486964 ARMCX5Q6P1M9 558 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 CCDC84Q86UT8 332 aaPredicted RBP10.83□□□□□ -0.68
POLR1A-208ENST00000486964 FAM160B2Q86V87 743 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 MLKLQ8NB16 471 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 LPAR1Q92633 364 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 CLIC6Q96NY7 704 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 AMNQ9BXJ7 453 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 GLT8D2Q9H1C3 349 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 RANBP17Q9H2T7 1088 aaKnown RBP10.83□□□□□ -0.68
POLR1A-208ENST00000486964 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
POLR1A-208ENST00000486964 BAZ2BQ9UIF8 2168 aaKnown RBP10.83□□□□□ -0.68
POLR1A-208ENST00000486964 MYH8P13535 1937 aa10.82□□□□□ -0.68
POLR1A-208ENST00000486964 OPLAHO14841 1288 aa10.82□□□□□ -0.68
POLR1A-208ENST00000486964 WDR46O15213 610 aaKnown RBP10.82□□□□□ -0.68
POLR1A-208ENST00000486964 EPHX2P34913 555 aa10.82□□□□□ -0.68
POLR1A-208ENST00000486964 ADCY7P51828 1080 aa10.82□□□□□ -0.68
POLR1A-208ENST00000486964 STAT2P52630 851 aa10.82□□□□□ -0.68
POLR1A-208ENST00000486964 MRPL12P52815 198 aaKnown RBP10.82□□□□□ -0.68
POLR1A-208ENST00000486964 UBASH3AP57075 661 aa10.82□□□□□ -0.68
POLR1A-208ENST00000486964 ETF1P62495 437 aaKnown RBP10.82□□□□□ -0.68
POLR1A-208ENST00000486964 ORC2Q13416 577 aaPredicted RBP10.82□□□□□ -0.68
POLR1A-208ENST00000486964 ARID5BQ14865 1188 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms