RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 TTLL11Q8NHH1 800 aa8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 CD99L2Q8TCZ2 262 aa8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 HHIPQ96QV1 700 aa8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 DEFB129Q9H1M3 183 aa8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 SEPT3Q9UH03 358 aa8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 SERPINA10Q9UK55 444 aa8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 RNF114Q9Y508 228 aa8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 PCDHAC2Q9Y5I4 1007 aa8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 ZNF804BA4D1E1 1349 aa8.24□□□□□ -1.09
TMEM39A-209ENST00000486235 CLRN2A0PK11 232 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 F8W031 263 aaPredicted RBP8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 H3BRJ5 948 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 IGKV5-2P06315 115 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 ZNF853P0CG23 659 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 IGHMBP2P38935 993 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 KCNJ4P48050 445 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 CRHR2Q13324 411 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 DLGAP5Q15398 846 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 CWF19L2Q2TBE0 894 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 INTS3Q68E01 1043 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 DTX1Q86Y01 620 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 C8orf58Q8NAV2 365 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 ERO1AQ96HE7 468 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 ZBED3Q96IU2 234 aaPredicted RBP8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 RUSC1Q9BVN2 902 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 VEZTQ9HBM0 779 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 PTPN22Q9Y2R2 807 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 LEMD3Q9Y2U8 911 aa8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 MYBBP1AQ9BQG0 1328 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-209ENST00000486235 SSC5DA1L4H1 1573 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 SPEF2Q9C093 1822 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 PI4KAP2A4QPH2 592 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 A6NHS1 94 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 SNAP23O00161 211 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 WNT11O96014 354 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 ZBTB48P10074 688 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 INHBEP58166 350 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 CAP1Q01518 475 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 CCDC30Q5VVM6 783 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 DIEXFQ68CQ4 756 aaKnown RBP8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 ANKRD34AQ69YU3 496 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 FDX2Q6P4F2 183 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 UBE3BQ7Z3V4 1068 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 CERS5Q8N5B7 392 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 PI4KAP1Q8N8J0 262 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 C1orf127Q8N9H9 656 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 CCDC97Q96F63 343 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 MFSD14AQ96MC6 490 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 IFT57Q9NWB7 429 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 JAG2Q9Y219 1238 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 AOX1Q06278 1338 aa8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 ZNF646O15015 1829 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-209ENST00000486235 APAF1O14727 1248 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 CES1P23141 567 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 FXR1P51114 621 aaKnown RBP eCLIP8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 GNAI1P63096 354 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 CHRNDQ07001 517 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 NEXNQ0ZGT2 675 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 MAP3K11Q16584 847 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 CFAP100Q494V2 611 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 NBPF12Q5TAG4 269 aaPredicted RBP8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 PDE12Q6L8Q7 609 aaKnown RBP8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 KSR2Q6VAB6 950 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 TSPYL6Q8N831 410 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 ARMC5Q96C12 935 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 MPHOSPH8Q99549 860 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 ANKRD2Q9GZV1 360 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 RNF208Q9H0X6 261 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 CD209Q9NNX6 404 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 SALL4Q9UJQ4 1053 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 TRIOBPQ9H2D6 2365 aa8.21□□□□□ -1.1
TMEM39A-209ENST00000486235 COL1A1P02452 1464 aaPredicted RBP8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 CEP290O15078 2479 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 PDE2AO00408 941 aaPredicted RBP8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 MYO1BO43795 1136 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 GAS2O43903 313 aaKnown RBP8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 TAF5LO75529 589 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 MMP14P50281 582 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 RBM5P52756 815 aaKnown RBP eCLIP8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 SP3Q02447 781 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 DNM1Q05193 864 aaKnown RBP8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 SUPT20HL1Q3ZLR7 823 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 OTUD7BQ6GQQ9 843 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 G2E3Q7L622 706 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 FBXL6Q8N531 539 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 EDEM1Q92611 657 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 PRMT6Q96LA8 375 aaPredicted RBP8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 PTPN18Q99952 460 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 DZANK1Q9NVP4 752 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 PPP2R3BQ9Y5P8 575 aa8.2□□□□□ -1.1
TMEM39A-209ENST00000486235 KRTAP4-8A0A0G2JLE6 195 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 USP2O75604 605 aaPredicted RBP8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 ATG7O95352 703 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 CALD1Q05682 793 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 DDX10Q13206 875 aaKnown RBP8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 RASA3Q14644 834 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 SLC4A8Q2Y0W8 1093 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 C8orf34Q49A92 452 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 SGO2Q562F6 1265 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms