RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 PTPAQ15257 358 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 ANKRD23Q86SG2 305 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 MB21D1Q8N884 522 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 PTPN18Q99952 460 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.4■□□□□ 0.54
ZNF248-206ENST00000485560 GCOM1H8Y6P7 765 aaPredicted RBP18.4■□□□□ 0.54
ZNF248-206ENST00000485560 GADD45BO75293 160 aaPredicted RBP18.4■□□□□ 0.54
ZNF248-206ENST00000485560 POLR2MP0CAP2 368 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 CYP2C8P10632 490 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 SLC39A14Q15043 492 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 ZNF174Q15697 407 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 FAM43AQ8N2R8 423 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 RNF146Q9NTX7 359 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 SLC45A1Q9Y2W3 748 aa18.4■□□□□ 0.54
ZNF248-206ENST00000485560 TESPA1A2RU30 521 aaPredicted RBP18.39■□□□□ 0.53
ZNF248-206ENST00000485560 FAM155AB1AL88 458 aaPredicted RBP18.39■□□□□ 0.53
ZNF248-206ENST00000485560 EDIL3O43854 480 aa18.39■□□□□ 0.53
ZNF248-206ENST00000485560 CNMDO75829 334 aa18.39■□□□□ 0.53
ZNF248-206ENST00000485560 AP3B2Q13367 1082 aa18.39■□□□□ 0.53
ZNF248-206ENST00000485560 PAGR1Q9BTK6 254 aa18.39■□□□□ 0.53
ZNF248-206ENST00000485560 ANO3Q9BYT9 981 aa18.39■□□□□ 0.53
ZNF248-206ENST00000485560 PNMA3Q9UL41 463 aa18.39■□□□□ 0.53
ZNF248-206ENST00000485560 SPTLC2O15270 562 aa18.38■□□□□ 0.53
ZNF248-206ENST00000485560 HSD17B4P51659 736 aa18.38■□□□□ 0.53
ZNF248-206ENST00000485560 TPRNQ4KMQ1 711 aa18.38■□□□□ 0.53
ZNF248-206ENST00000485560 MCTP2Q6DN12 878 aa18.38■□□□□ 0.53
ZNF248-206ENST00000485560 NEK8Q86SG6 692 aa18.38■□□□□ 0.53
ZNF248-206ENST00000485560 FCHSD1Q86WN1 690 aa18.38■□□□□ 0.53
ZNF248-206ENST00000485560 MCF2L2Q86YR7 1114 aa18.38■□□□□ 0.53
ZNF248-206ENST00000485560 TEX2Q8IWB9 1127 aa18.38■□□□□ 0.53
ZNF248-206ENST00000485560 TXNRD2Q9NNW7 524 aa18.38■□□□□ 0.53
ZNF248-206ENST00000485560 RBPJLQ9UBG7 517 aa18.38■□□□□ 0.53
ZNF248-206ENST00000485560 SPDYE3A6NKU9 549 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 FOSP01100 380 aaPredicted RBP18.37■□□□□ 0.53
ZNF248-206ENST00000485560 MARCKSP29966 332 aaPredicted RBP18.37■□□□□ 0.53
ZNF248-206ENST00000485560 MCM7P33993 719 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 GHRHRQ02643 423 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 LETM2Q2VYF4 491 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 KCNG4Q8TDN1 519 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 SPATC1LQ9H0A9 340 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 MANSC4A6NHS7 340 aaPredicted RBP18.37■□□□□ 0.53
ZNF248-206ENST00000485560 PTMSP20962 102 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 TKFCQ3LXA3 575 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 RIOX2Q8IUF8 465 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 HHIPL1Q96JK4 782 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 CEP131Q9UPN4 1083 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 RABGAP1Q9Y3P9 1069 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 MRVI1Q9Y6F6 885 aa18.37■□□□□ 0.53
ZNF248-206ENST00000485560 CEP350Q5VT06 3117 aa18.36■□□□□ 0.53
ZNF248-206ENST00000485560 ME1P48163 572 aa18.36■□□□□ 0.53
ZNF248-206ENST00000485560 NSMFQ6X4W1 530 aa18.36■□□□□ 0.53
ZNF248-206ENST00000485560 SMCR8Q8TEV9 937 aaPredicted RBP18.36■□□□□ 0.53
ZNF248-206ENST00000485560 COL20A1Q9P218 1284 aa18.36■□□□□ 0.53
ZNF248-206ENST00000485560 PCDHA7Q9UN72 937 aa18.36■□□□□ 0.53
ZNF248-206ENST00000485560 LCTP09848 1927 aa18.36■□□□□ 0.53
ZNF248-206ENST00000485560 ZNFX1Q9P2E3 1918 aaKnown RBP18.35■□□□□ 0.53
ZNF248-206ENST00000485560 CCNT1O60563 726 aaKnown RBP18.35■□□□□ 0.53
ZNF248-206ENST00000485560 PPP6R2O75170 966 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 UBE2HP62256 183 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 RPS6P62753 249 aaKnown RBP18.35■□□□□ 0.53
ZNF248-206ENST00000485560 PTGDRQ13258 359 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 Q3C1V9 767 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 SLC30A10Q6XR72 485 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 RNF207Q6ZRF8 634 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 SAMD3Q8N6K7 520 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 CRYGNQ8WXF5 182 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 MOV10L1Q9BXT6 1211 aaKnown RBP18.35■□□□□ 0.53
ZNF248-206ENST00000485560 ACAD9Q9H845 621 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 MAP3K20Q9NYL2 800 aaKnown RBP18.35■□□□□ 0.53
ZNF248-206ENST00000485560 IGF2BP3O00425 579 aaKnown RBP eCLIP18.35■□□□□ 0.53
ZNF248-206ENST00000485560 SREBF1P36956 1147 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 CHST13Q8NET6 341 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 GPT2Q8TD30 523 aa18.35■□□□□ 0.53
ZNF248-206ENST00000485560 SYTL5Q8TDW5 730 aaPredicted RBP18.35■□□□□ 0.53
ZNF248-206ENST00000485560 TDP2O95551 362 aa18.34■□□□□ 0.53
ZNF248-206ENST00000485560 BMP15O95972 392 aa18.34■□□□□ 0.53
ZNF248-206ENST00000485560 ARHGAP4P98171 946 aa18.34■□□□□ 0.53
ZNF248-206ENST00000485560 ATP2C1P98194 919 aaPredicted RBP18.34■□□□□ 0.53
ZNF248-206ENST00000485560 BAATQ14032 418 aaPredicted RBP18.34■□□□□ 0.53
ZNF248-206ENST00000485560 CYP4F22Q6NT55 531 aa18.34■□□□□ 0.53
ZNF248-206ENST00000485560 PAXIP1Q6ZW49 1069 aaPredicted RBP18.34■□□□□ 0.53
ZNF248-206ENST00000485560 NCAPG2Q86XI2 1143 aa18.34■□□□□ 0.53
ZNF248-206ENST00000485560 C4orf32Q8N8J7 132 aa18.34■□□□□ 0.53
ZNF248-206ENST00000485560 GTF3C2Q8WUA4 911 aaPredicted RBP18.34■□□□□ 0.53
ZNF248-206ENST00000485560 R3HDMLQ9H3Y0 253 aa18.34■□□□□ 0.53
ZNF248-206ENST00000485560 A1CFQ9NQ94 594 aaKnown RBP18.34■□□□□ 0.53
ZNF248-206ENST00000485560 GOLGA6L4A6NEF3 574 aa18.33■□□□□ 0.52
ZNF248-206ENST00000485560 TRAK2O60296 914 aa18.33■□□□□ 0.52
ZNF248-206ENST00000485560 USP11P51784 963 aa18.33■□□□□ 0.52
ZNF248-206ENST00000485560 ERVK-9P63128 1117 aa18.33■□□□□ 0.52
ZNF248-206ENST00000485560 ERVK-24P63145 666 aa18.33■□□□□ 0.52
ZNF248-206ENST00000485560 GRM1Q13255 1194 aa18.33■□□□□ 0.52
ZNF248-206ENST00000485560 AXDND1Q5T1B0 1012 aaPredicted RBP18.33■□□□□ 0.52
ZNF248-206ENST00000485560 JMYQ8N9B5 988 aa18.33■□□□□ 0.52
ZNF248-206ENST00000485560 ZIC5Q96T25 663 aa18.33■□□□□ 0.52
ZNF248-206ENST00000485560 PARK7Q99497 189 aaKnown RBP18.33■□□□□ 0.52
ZNF248-206ENST00000485560 TMEM60Q9H2L4 133 aa18.33■□□□□ 0.52
ZNF248-206ENST00000485560 FBXO2Q9UK22 296 aaPredicted RBP18.33■□□□□ 0.52
ZNF248-206ENST00000485560 DDX49Q9Y6V7 483 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms