RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 TRERF1Q96PN7 1200 aa16.61■□□□□ 0.25
LRIF1-202ENST00000485275 ZIC5Q96T25 663 aa16.61■□□□□ 0.25
LRIF1-202ENST00000485275 TEX13BQ9BXU2 312 aa16.61■□□□□ 0.25
LRIF1-202ENST00000485275 ANO3Q9BYT9 981 aa16.61■□□□□ 0.25
LRIF1-202ENST00000485275 RNF146Q9NTX7 359 aa16.61■□□□□ 0.25
LRIF1-202ENST00000485275 RBPJLQ9UBG7 517 aa16.61■□□□□ 0.25
LRIF1-202ENST00000485275 PCNTO95613 3336 aa16.6■□□□□ 0.25
LRIF1-202ENST00000485275 TESPA1A2RU30 521 aaPredicted RBP16.6■□□□□ 0.25
LRIF1-202ENST00000485275 IGF2BP3O00425 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
LRIF1-202ENST00000485275 TRAPPC10P48553 1259 aa16.6■□□□□ 0.25
LRIF1-202ENST00000485275 HSD17B4P51659 736 aa16.6■□□□□ 0.25
LRIF1-202ENST00000485275 SLC39A14Q15043 492 aa16.6■□□□□ 0.25
LRIF1-202ENST00000485275 ZNF174Q15697 407 aa16.6■□□□□ 0.25
LRIF1-202ENST00000485275 SLC30A10Q6XR72 485 aa16.6■□□□□ 0.25
LRIF1-202ENST00000485275 ANKRD23Q86SG2 305 aa16.6■□□□□ 0.25
LRIF1-202ENST00000485275 PAGR1Q9BTK6 254 aa16.6■□□□□ 0.25
LRIF1-202ENST00000485275 ABT1Q9ULW3 272 aaKnown RBP16.6■□□□□ 0.25
LRIF1-202ENST00000485275 MARCKSP29966 332 aaPredicted RBP16.59■□□□□ 0.25
LRIF1-202ENST00000485275 STAT3P40763 770 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 GRIN1Q05586 938 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 FSTL1Q12841 308 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 PLS1Q14651 629 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 TPRNQ4KMQ1 711 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 PURBQ96QR8 312 aaKnown RBP16.59■□□□□ 0.25
LRIF1-202ENST00000485275 GLT8D2Q9H1C3 349 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 NOL7Q9UMY1 257 aaKnown RBP16.59■□□□□ 0.25
LRIF1-202ENST00000485275 CTDP1Q9Y5B0 961 aaPredicted RBP16.59■□□□□ 0.25
LRIF1-202ENST00000485275 GOLGA6L22H0YM25 854 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 GCOM1H8Y6P7 765 aaPredicted RBP16.59■□□□□ 0.25
LRIF1-202ENST00000485275 SPTLC2O15270 562 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 TDP2O95551 362 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 POLR2MP0CAP2 368 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 OSBPP22059 807 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 MCM7P33993 719 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 TRAF1Q13077 416 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 AP3B2Q13367 1082 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 STK38Q15208 465 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 LETM2Q2VYF4 491 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 Q3C1V9 767 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 NEK8Q86SG6 692 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 FCHSD1Q86WN1 690 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 C4orf32Q8N8J7 132 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 SPATC1LQ9H0A9 340 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 PCDHA7Q9UN72 937 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 SLC45A1Q9Y2W3 748 aa16.59■□□□□ 0.25
LRIF1-202ENST00000485275 RPS6P62753 249 aaKnown RBP16.58■□□□□ 0.24
LRIF1-202ENST00000485275 PABPC4Q13310 644 aaKnown RBP eCLIP16.58■□□□□ 0.24
LRIF1-202ENST00000485275 AXDND1Q5T1B0 1012 aaPredicted RBP16.58■□□□□ 0.24
LRIF1-202ENST00000485275 MB21D1Q8N884 522 aa16.58■□□□□ 0.24
LRIF1-202ENST00000485275 TMEM60Q9H2L4 133 aa16.58■□□□□ 0.24
LRIF1-202ENST00000485275 SLC37A4O43826 429 aa16.57■□□□□ 0.24
LRIF1-202ENST00000485275 SREBF1P36956 1147 aa16.57■□□□□ 0.24
LRIF1-202ENST00000485275 RIOX2Q8IUF8 465 aa16.57■□□□□ 0.24
LRIF1-202ENST00000485275 SYTL5Q8TDW5 730 aaPredicted RBP16.57■□□□□ 0.24
LRIF1-202ENST00000485275 MOV10L1Q9BXT6 1211 aaKnown RBP16.57■□□□□ 0.24
LRIF1-202ENST00000485275 A1CFQ9NQ94 594 aaKnown RBP16.57■□□□□ 0.24
LRIF1-202ENST00000485275 FBXO2Q9UK22 296 aaPredicted RBP16.57■□□□□ 0.24
LRIF1-202ENST00000485275 UBXN2AP68543 259 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 ATP2C1P98194 919 aaPredicted RBP16.56■□□□□ 0.24
LRIF1-202ENST00000485275 PTGDRQ13258 359 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 IL17AQ16552 155 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 CYP4F22Q6NT55 531 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 KCNG4Q8TDN1 519 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 HHIPL1Q96JK4 782 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 CLIC6Q96NY7 704 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 PNMA3Q9UL41 463 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 RPTORQ8N122 1335 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 SPDYE3A6NKU9 549 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 CCNT1O60563 726 aaKnown RBP16.56■□□□□ 0.24
LRIF1-202ENST00000485275 PPP6R2O75170 966 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 ME1P48163 572 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 UBE2HP62256 183 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 ARHGAP4P98171 946 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 NSMFQ6X4W1 530 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 IL31RAQ8NI17 732 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 ACAD9Q9H845 621 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 PNMA2Q9UL42 364 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 RABGAP1Q9Y3P9 1069 aa16.56■□□□□ 0.24
LRIF1-202ENST00000485275 FRMPD4Q14CM0 1322 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 ADGRA2Q96PE1 1338 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 MANSC4A6NHS7 340 aaPredicted RBP16.55■□□□□ 0.24
LRIF1-202ENST00000485275 ERVK-9P63128 1117 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 ERVK-24P63145 666 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 BAATQ14032 418 aaPredicted RBP16.55■□□□□ 0.24
LRIF1-202ENST00000485275 RNF207Q6ZRF8 634 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 MCF2L2Q86YR7 1114 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 SMCR8Q8TEV9 937 aaPredicted RBP16.55■□□□□ 0.24
LRIF1-202ENST00000485275 PORCNQ9H237 461 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 GOLPH3LQ9H4A5 285 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 CYP39A1Q9NYL5 469 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 MORC2Q9Y6X9 1032 aaPredicted RBP16.55■□□□□ 0.24
LRIF1-202ENST00000485275 LRRC37A2A6NM11 1700 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 ASTN1O14525 1302 aa16.55■□□□□ 0.24
LRIF1-202ENST00000485275 FAM86B1E9PN63 330 aa16.54■□□□□ 0.24
LRIF1-202ENST00000485275 TRAK2O60296 914 aa16.54■□□□□ 0.24
LRIF1-202ENST00000485275 FOSP01100 380 aaPredicted RBP16.54■□□□□ 0.24
LRIF1-202ENST00000485275 FAM86B2P0C5J1 330 aa16.54■□□□□ 0.24
LRIF1-202ENST00000485275 LIG1P18858 919 aa16.54■□□□□ 0.24
LRIF1-202ENST00000485275 ERCC3P19447 782 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms