RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 NOVP48745 357 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 VPS72Q15906 364 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 WDR93Q6P2C0 686 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 KIAA1328Q86T90 577 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 TEX11Q8IYF3 940 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 ERGIC2Q96RQ1 377 aa22■■□□□ 1.11
LIMS2-215ENST00000484252 EIF3CQ99613 913 aaKnown RBP22■■□□□ 1.11
LIMS2-215ENST00000484252 DDX60LQ5H9U9 1706 aaKnown RBP22■■□□□ 1.11
LIMS2-215ENST00000484252 RHOXF2BP0C7M4 288 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 MTIF2P46199 727 aaKnown RBP21.99■■□□□ 1.11
LIMS2-215ENST00000484252 PAPD7Q5XG87 772 aaKnown RBP21.99■■□□□ 1.11
LIMS2-215ENST00000484252 SLF2Q8IX21 1173 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 RPGRIP1Q96KN7 1286 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 RHOXF2Q9BQY4 288 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 ABCB6Q9NP58 842 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 BTAF1O14981 1849 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 MCM3P25205 808 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 STK4Q13043 487 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 NFIXQ14938 502 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 FKBP15Q5T1M5 1219 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 REXO1Q8N1G1 1221 aaKnown RBP21.99■■□□□ 1.11
LIMS2-215ENST00000484252 JAKMIP2Q96AA8 810 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 PSD3Q9NYI0 1048 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 TRIM10Q9UDY6 481 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 STK17AQ9UEE5 414 aa21.99■■□□□ 1.11
LIMS2-215ENST00000484252 TECP42680 631 aa21.98■■□□□ 1.11
LIMS2-215ENST00000484252 CKAP4Q07065 602 aaKnown RBP21.98■■□□□ 1.11
LIMS2-215ENST00000484252 TBCKQ8TEA7 893 aa21.98■■□□□ 1.11
LIMS2-215ENST00000484252 EXOC4Q96A65 974 aa21.98■■□□□ 1.11
LIMS2-215ENST00000484252 FAM163AQ96GL9 167 aaPredicted RBP21.98■■□□□ 1.11
LIMS2-215ENST00000484252 NOC4LQ9BVI4 516 aaKnown RBP21.98■■□□□ 1.11
LIMS2-215ENST00000484252 ZCCHC17Q9NP64 241 aaKnown RBP21.98■■□□□ 1.11
LIMS2-215ENST00000484252 SAR1BQ9Y6B6 198 aa21.98■■□□□ 1.11
LIMS2-215ENST00000484252 IL1R1P14778 569 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 ATP2B4P23634 1241 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 RFC4P35249 363 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 VSNL1P62760 191 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 USP17L2Q6R6M4 530 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 CNBD1Q8NA66 436 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 MMTAG2Q9BU76 263 aaKnown RBP21.97■■□□□ 1.11
LIMS2-215ENST00000484252 NHEJ1Q9H9Q4 299 aaPredicted RBP21.97■■□□□ 1.11
LIMS2-215ENST00000484252 CD209Q9NNX6 404 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 PVALEFA0A1B0GWK0 134 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 RASSF10A6NK89 507 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 MIIPQ5JXC2 388 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 NCAPH2Q6IBW4 605 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 SV2BQ7L1I2 683 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 TSGA10Q9BZW7 698 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 RIOX1Q9H6W3 641 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 AGPAT5Q9NUQ2 364 aa21.97■■□□□ 1.11
LIMS2-215ENST00000484252 NHSQ6T4R5 1651 aa21.96■■□□□ 1.11
LIMS2-215ENST00000484252 CDK5RAP2Q96SN8 1893 aa21.96■■□□□ 1.11
LIMS2-215ENST00000484252 ANO9A1A5B4 782 aa21.96■■□□□ 1.11
LIMS2-215ENST00000484252 H3BQF6 201 aa21.96■■□□□ 1.11
LIMS2-215ENST00000484252 FGFR1OPO95684 399 aaKnown RBP21.96■■□□□ 1.11
LIMS2-215ENST00000484252 FXR2P51116 673 aaKnown RBP eCLIP21.96■■□□□ 1.11
LIMS2-215ENST00000484252 CENPPQ6IPU0 288 aa21.96■■□□□ 1.11
LIMS2-215ENST00000484252 NOA1Q8NC60 698 aaKnown RBP21.96■■□□□ 1.11
LIMS2-215ENST00000484252 CEP95Q96GE4 821 aa21.96■■□□□ 1.11
LIMS2-215ENST00000484252 PCMTD1Q96MG8 357 aaPredicted RBP21.96■■□□□ 1.11
LIMS2-215ENST00000484252 ACBD3Q9H3P7 528 aa21.96■■□□□ 1.11
LIMS2-215ENST00000484252 ABCB11O95342 1321 aa21.96■■□□□ 1.11
LIMS2-215ENST00000484252 TFRCP02786 760 aaKnown RBP21.95■■□□□ 1.11
LIMS2-215ENST00000484252 GPSM2P81274 684 aa21.95■■□□□ 1.11
LIMS2-215ENST00000484252 MCM6Q14566 821 aa21.95■■□□□ 1.11
LIMS2-215ENST00000484252 TMEM266Q2M3C6 531 aa21.95■■□□□ 1.11
LIMS2-215ENST00000484252 TRAPPC3LQ5T215 181 aa21.95■■□□□ 1.11
LIMS2-215ENST00000484252 MTMR9Q96QG7 549 aa21.95■■□□□ 1.11
LIMS2-215ENST00000484252 PIGSQ96S52 555 aa21.95■■□□□ 1.11
LIMS2-215ENST00000484252 RAB34Q9BZG1 259 aa21.95■■□□□ 1.11
LIMS2-215ENST00000484252 CPVLQ9H3G5 476 aa21.95■■□□□ 1.11
LIMS2-215ENST00000484252 FCER1AP12319 257 aa21.95■■□□□ 1.1
LIMS2-215ENST00000484252 UNC13DQ70J99 1090 aa21.95■■□□□ 1.1
LIMS2-215ENST00000484252 NGLY1Q96IV0 654 aa21.95■■□□□ 1.1
LIMS2-215ENST00000484252 C8orf37Q96NL8 207 aa21.95■■□□□ 1.1
LIMS2-215ENST00000484252 LRRC27Q9C0I9 530 aa21.95■■□□□ 1.1
LIMS2-215ENST00000484252 PLIN4Q96Q06 1357 aa21.95■■□□□ 1.1
LIMS2-215ENST00000484252 TOM1O60784 492 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 ATP1A1P05023 1023 aaKnown RBP21.94■■□□□ 1.1
LIMS2-215ENST00000484252 HNRNPH3P31942 346 aaKnown RBP21.94■■□□□ 1.1
LIMS2-215ENST00000484252 USP14P54578 494 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 ST5P78524 1137 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 CALCRLQ16602 461 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 AMIGO3Q86WK7 504 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 POTEDQ86YR6 584 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 KIAA0895Q8NCT3 520 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 TBC1D22AQ8WUA7 517 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 RPGRQ92834 1020 aaKnown RBP21.94■■□□□ 1.1
LIMS2-215ENST00000484252 PURBQ96QR8 312 aaKnown RBP21.94■■□□□ 1.1
LIMS2-215ENST00000484252 PDE11AQ9HCR9 933 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 LRWD1Q9UFC0 647 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 GAKO14976 1311 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 UFL1O94874 794 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 RHBDL3P58872 404 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 CASP8Q14790 479 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 ASPRV1Q53RT3 343 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 SEMA6BQ9H3T3 888 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 VAT1LQ9HCJ6 419 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 BIN2Q9UBW5 565 aaPredicted RBP21.94■■□□□ 1.1
LIMS2-215ENST00000484252 GGA1Q9UJY5 639 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms