RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 RBM47A0AV96 593 aaKnown RBP15.32■□□□□ 0.04
UBR4-213ENST00000483922 MS4A1P11836 297 aa15.32■□□□□ 0.04
UBR4-213ENST00000483922 SLC1A4P43007 532 aa15.32■□□□□ 0.04
UBR4-213ENST00000483922 PPARAQ07869 468 aa15.32■□□□□ 0.04
UBR4-213ENST00000483922 BAATQ14032 418 aaPredicted RBP15.32■□□□□ 0.04
UBR4-213ENST00000483922 DUSP28Q4G0W2 176 aa15.32■□□□□ 0.04
UBR4-213ENST00000483922 DEFB128Q7Z7B8 93 aa15.32■□□□□ 0.04
UBR4-213ENST00000483922 MTIF3Q9H2K0 278 aaKnown RBP15.32■□□□□ 0.04
UBR4-213ENST00000483922 PRRC2BQ5JSZ5 2229 aaKnown RBP15.32■□□□□ 0.04
UBR4-213ENST00000483922 ZBBXA8MT70 800 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 ERC2O15083 957 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 TLL1O43897 1013 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 GNAT2P19087 354 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 TAP1Q03518 808 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 CTDSPL2Q05D32 466 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 GPNMBQ14956 572 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 OTUD7AQ8TE49 926 aaPredicted RBP15.31■□□□□ 0.04
UBR4-213ENST00000483922 SEZ6LQ9BYH1 1024 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 DCTPP1Q9H773 170 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 VTA1Q9NP79 307 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 TNKSO95271 1327 aa15.31■□□□□ 0.04
UBR4-213ENST00000483922 NFIBO00712 420 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 ZEB2O60315 1214 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 LPXNO60711 386 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 ZFYP08048 801 aaPredicted RBP15.3■□□□□ 0.04
UBR4-213ENST00000483922 SLC16A2P36021 539 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 NBPF20Q3BBV1 942 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 TMEM67Q5HYA8 995 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 NSMFQ6X4W1 530 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 PI4K2BQ8TCG2 481 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 CLEC4DQ8WXI8 215 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 COPS5Q92905 334 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 CTAGE1Q96RT6 745 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 WDR11Q9BZH6 1224 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 RANBP17Q9H2T7 1088 aaKnown RBP15.3■□□□□ 0.04
UBR4-213ENST00000483922 ZNF287Q9HBT7 754 aa15.3■□□□□ 0.04
UBR4-213ENST00000483922 MYL3P08590 195 aa15.29■□□□□ 0.04
UBR4-213ENST00000483922 IQCF3P0C7M6 154 aa15.29■□□□□ 0.04
UBR4-213ENST00000483922 ALDH5A1P51649 535 aaPredicted RBP15.29■□□□□ 0.04
UBR4-213ENST00000483922 PDE4BQ07343 736 aa15.29■□□□□ 0.04
UBR4-213ENST00000483922 IKQ13123 557 aaPredicted RBP15.29■□□□□ 0.04
UBR4-213ENST00000483922 ZMYM1Q5SVZ6 1142 aa15.29■□□□□ 0.04
UBR4-213ENST00000483922 LRFN3Q9BTN0 628 aa15.29■□□□□ 0.04
UBR4-213ENST00000483922 C11orf16Q9NQ32 467 aa15.29■□□□□ 0.04
UBR4-213ENST00000483922 CCPG1Q9ULG6 757 aa15.29■□□□□ 0.04
UBR4-213ENST00000483922 ISY1Q9ULR0 285 aaKnown RBP15.29■□□□□ 0.04
UBR4-213ENST00000483922 STX8Q9UNK0 236 aa15.29■□□□□ 0.04
UBR4-213ENST00000483922 ICAM1P05362 532 aa15.28■□□□□ 0.04
UBR4-213ENST00000483922 TCTN1Q2MV58 587 aa15.28■□□□□ 0.04
UBR4-213ENST00000483922 VPS53Q5VIR6 699 aa15.28■□□□□ 0.04
UBR4-213ENST00000483922 BTNL9Q6UXG8 535 aa15.28■□□□□ 0.04
UBR4-213ENST00000483922 TMCO2Q7Z6W1 182 aaPredicted RBP15.28■□□□□ 0.04
UBR4-213ENST00000483922 FAM122AQ96E09 287 aa15.28■□□□□ 0.04
UBR4-213ENST00000483922 CD320Q9NPF0 282 aa15.28■□□□□ 0.04
UBR4-213ENST00000483922 MTMR7Q9Y216 660 aa15.28■□□□□ 0.04
UBR4-213ENST00000483922 LCHNA4D1U4 455 aa15.27■□□□□ 0.04
UBR4-213ENST00000483922 ARIH2O95376 493 aa15.27■□□□□ 0.04
UBR4-213ENST00000483922 SUPT20HL2P0C7V6 817 aa15.27■□□□□ 0.04
UBR4-213ENST00000483922 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
UBR4-213ENST00000483922 SLC30A10Q6XR72 485 aa15.27■□□□□ 0.04
UBR4-213ENST00000483922 HERC6Q8IVU3 1022 aa15.27■□□□□ 0.04
UBR4-213ENST00000483922 TET1Q8NFU7 2136 aa15.27■□□□□ 0.04
UBR4-213ENST00000483922 PHOSPHO2Q8TCD6 241 aa15.27■□□□□ 0.04
UBR4-213ENST00000483922 ARNTL2Q8WYA1 636 aa15.27■□□□□ 0.04
UBR4-213ENST00000483922 MTG1Q9BT17 334 aaPredicted RBP15.27■□□□□ 0.04
UBR4-213ENST00000483922 NAPBQ9H115 298 aa15.27■□□□□ 0.04
UBR4-213ENST00000483922 POLR3EQ9NVU0 708 aa15.27■□□□□ 0.04
UBR4-213ENST00000483922 PTPRSQ13332 1948 aa15.26■□□□□ 0.03
UBR4-213ENST00000483922 A6NJR5 290 aa15.26■□□□□ 0.03
UBR4-213ENST00000483922 PFKMP08237 780 aa15.26■□□□□ 0.03
UBR4-213ENST00000483922 FGRP09769 529 aa15.26■□□□□ 0.03
UBR4-213ENST00000483922 EDNRBP24530 442 aa15.26■□□□□ 0.03
UBR4-213ENST00000483922 GRB10Q13322 594 aa15.26■□□□□ 0.03
UBR4-213ENST00000483922 SKIV2LQ15477 1246 aaKnown RBP15.26■□□□□ 0.03
UBR4-213ENST00000483922 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
UBR4-213ENST00000483922 OR6J1Q8NGC5 347 aa15.26■□□□□ 0.03
UBR4-213ENST00000483922 C1QTNF1Q9BXJ1 281 aa15.26■□□□□ 0.03
UBR4-213ENST00000483922 NACAP1Q9BZK3 213 aa15.26■□□□□ 0.03
UBR4-213ENST00000483922 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
UBR4-213ENST00000483922 SCN10AQ9Y5Y9 1956 aa15.25■□□□□ 0.03
UBR4-213ENST00000483922 TSPY2A6NKD2 308 aa15.25■□□□□ 0.03
UBR4-213ENST00000483922 TMEM47Q9BQJ4 181 aa15.25■□□□□ 0.03
UBR4-213ENST00000483922 ANAPC4Q9UJX5 808 aa15.25■□□□□ 0.03
UBR4-213ENST00000483922 FRMPD2Q68DX3 1309 aaPredicted RBP15.24■□□□□ 0.03
UBR4-213ENST00000483922 CALML3P27482 149 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 RFC2P35250 354 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 CPT1AP50416 773 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 RPS6P62753 249 aaKnown RBP15.24■□□□□ 0.03
UBR4-213ENST00000483922 AAK1Q2M2I8 961 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 FAM47CQ5HY64 1035 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 SYDE2Q5VT97 1194 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 NFRKBQ6P4R8 1299 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 DCAF4Q8WV16 495 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 TBC1D5Q92609 795 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 DHX38Q92620 1227 aaKnown RBP15.24■□□□□ 0.03
UBR4-213ENST00000483922 SLC9A7Q96T83 725 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 GPCPD1Q9NPB8 672 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 ADD3Q9UEY8 706 aaKnown RBP15.24■□□□□ 0.03
UBR4-213ENST00000483922 COG5Q9UP83 839 aa15.24■□□□□ 0.03
UBR4-213ENST00000483922 PTPDC1A2A3K4 754 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms