RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TEPSINQ96N21 525 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 MBOAT7Q96N66 472 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 PRR12Q9ULL5 1215 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 CYP3A7-CYP3A51PA0A087WV96 503 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP17L15C9J2P7 530 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP17L13C9JLJ4 530 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP17L11C9JVI0 530 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP17L18D6R9N7 530 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP17L22D6RA61 530 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP17L17D6RBQ6 530 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP17L19D6RCP7 530 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP17L20D6RJB6 530 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 PLCG1P19174 1290 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 CYP3A7P24462 503 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 TXKP42681 527 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 STAT2P52630 851 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 UBASH3AP57075 661 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP17L24Q0WX57 530 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 RASA3Q14644 834 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 NOLC1Q14978 699 aaKnown RBP eCLIP14.93□□□□□ -0.02
CPNE1-225ENST00000483495 TMEM266Q2M3C6 531 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 ZNF658Q5TYW1 1059 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-225ENST00000483495 SPATA1Q5VX52 437 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP17L6PQ6QN14 398 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 MOXD1Q6UVY6 613 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-225ENST00000483495 MIGA2Q7L4E1 593 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 SPICE1Q8N0Z3 855 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 RASSF8Q8NHQ8 419 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 ANO3Q9BYT9 981 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 RAB34Q9BZG1 259 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 SH2D4AQ9H788 454 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 VCPKMTQ9H867 229 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 DDX25Q9UHL0 483 aaKnown RBP14.93□□□□□ -0.02
CPNE1-225ENST00000483495 PHF20L1A8MW92 1017 aa14.92□□□□□ -0.02
CPNE1-225ENST00000483495 SERPINC1P01008 464 aa14.92□□□□□ -0.02
CPNE1-225ENST00000483495 ASNSP08243 561 aa14.92□□□□□ -0.02
CPNE1-225ENST00000483495 PRELPP51888 382 aa14.92□□□□□ -0.02
CPNE1-225ENST00000483495 LRMPQ12912 555 aa14.92□□□□□ -0.02
CPNE1-225ENST00000483495 TRAF1Q13077 416 aa14.92□□□□□ -0.02
CPNE1-225ENST00000483495 IKQ13123 557 aaPredicted RBP14.92□□□□□ -0.02
CPNE1-225ENST00000483495 DHX8Q14562 1220 aaKnown RBP14.92□□□□□ -0.02
CPNE1-225ENST00000483495 TRMT44Q8IYL2 757 aaKnown RBP14.92□□□□□ -0.02
CPNE1-225ENST00000483495 HAS1Q92839 578 aa14.92□□□□□ -0.02
CPNE1-225ENST00000483495 KLRC4O43908 158 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 EGFRP00533 1210 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 FOSP01100 380 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-225ENST00000483495 GMPSP49915 693 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-225ENST00000483495 FILIP1Q7Z7B0 1213 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 GINM1Q9NU53 330 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 LRWD1Q9UFC0 647 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 SYNRGQ9UMZ2 1314 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 PIK3CDO00329 1044 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 OPLAHO14841 1288 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 SNAP25P60880 206 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 RASSF7Q02833 373 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 FAM83BQ5T0W9 1011 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 MICALL2Q8IY33 904 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 SMYD4Q8IYR2 804 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-225ENST00000483495 CHURC1Q8WUH1 139 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 CALML4Q96GE6 196 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 NAP1L5Q96NT1 182 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-225ENST00000483495 C7orf25Q9BPX7 421 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 RANBP17Q9H2T7 1088 aaKnown RBP14.91□□□□□ -0.02
CPNE1-225ENST00000483495 STK17AQ9UEE5 414 aa14.91□□□□□ -0.02
CPNE1-225ENST00000483495 RHOBTB3O94955 611 aa14.9□□□□□ -0.02
CPNE1-225ENST00000483495 GRB10Q13322 594 aa14.9□□□□□ -0.02
CPNE1-225ENST00000483495 CDKAL1Q5VV42 579 aa14.9□□□□□ -0.02
CPNE1-225ENST00000483495 TMC6Q7Z403 805 aa14.9□□□□□ -0.02
CPNE1-225ENST00000483495 FAM160B2Q86V87 743 aa14.9□□□□□ -0.02
CPNE1-225ENST00000483495 PLIN2Q99541 437 aa14.9□□□□□ -0.02
CPNE1-225ENST00000483495 P2RX7Q99572 595 aaKnown RBP14.9□□□□□ -0.02
CPNE1-225ENST00000483495 KCNMB3Q9NPA1 279 aa14.9□□□□□ -0.02
CPNE1-225ENST00000483495 SAMSN1Q9NSI8 373 aaKnown RBP14.9□□□□□ -0.02
CPNE1-225ENST00000483495 INTS13Q9NVM9 706 aa14.9□□□□□ -0.02
CPNE1-225ENST00000483495 RWDD2AQ9UIY3 292 aa14.9□□□□□ -0.02
CPNE1-225ENST00000483495 SREBF1P36956 1147 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 ARID5BQ14865 1188 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 USH1GQ495M9 461 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 KMT5BQ4FZB7 885 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 VSTM4Q8IW00 320 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 CCDC150Q8NCX0 1101 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 PNMA5Q96PV4 448 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 TRIM9Q9C026 710 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-225ENST00000483495 CNOT7Q9UIV1 285 aaKnown RBP14.89□□□□□ -0.03
CPNE1-225ENST00000483495 MYH7BA7E2Y1 1941 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 SLC26A4O43511 780 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 CCZ1BP86790 482 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 CCZ1P86791 482 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-225ENST00000483495 ARHGAP4P98171 946 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 AMPD3Q01432 767 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 TMEM119Q4V9L6 283 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 KLHL10Q6JEL2 608 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 C17orf53Q8N3J3 647 aaPredicted RBP14.89□□□□□ -0.03
CPNE1-225ENST00000483495 GTPBP4Q9BZE4 634 aaKnown RBP14.89□□□□□ -0.03
CPNE1-225ENST00000483495 BLOC1S4Q9NUP1 217 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 FEM1BQ9UK73 627 aa14.89□□□□□ -0.03
CPNE1-225ENST00000483495 POTEMA6NI47 508 aa14.88□□□□□ -0.03
CPNE1-225ENST00000483495 CDK11BP21127 795 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms