RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 KLK7P49862 253 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 OR8K1Q8NGG5 319 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 RASSF8Q8NHQ8 419 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 TMEM47Q9BQJ4 181 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 CCSER1Q9C0I3 900 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 BARHL2Q9NY43 387 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 GUCA1BQ9UMX6 200 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 CCDC88AQ3V6T2 1871 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 B4DLN1 442 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 F8W031 263 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-220ENST00000482507 UBA7P41226 1012 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 TUBB2AQ13885 445 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 TRIM47Q96LD4 638 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 TUBB2BQ9BVA1 445 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 COA1Q9GZY4 146 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 MKNK2Q9HBH9 465 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 HDAC6Q9UBN7 1215 aa16.67■□□□□ 0.26
ATG4B-220ENST00000482507 ROBO3Q96MS0 1386 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 CCDC66A2RUB6 948 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-220ENST00000482507 PES1O00541 588 aaKnown RBP16.66■□□□□ 0.26
ATG4B-220ENST00000482507 WHAMMP3Q1A5X7 153 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 TGFBRAP1Q8WUH2 860 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 EYA3Q99504 573 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 THAP9Q9H5L6 903 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 AGPAT5Q9NUQ2 364 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 MYO1AQ9UBC5 1043 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 SAP30BPQ9UHR5 308 aaKnown RBP16.66■□□□□ 0.26
ATG4B-220ENST00000482507 MYO6Q9UM54 1294 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 CAPN11Q9UMQ6 739 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 L1RE1Q9UN81 338 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 LUC7L2Q9Y383 392 aaKnown RBP16.66■□□□□ 0.26
ATG4B-220ENST00000482507 A0A1W2PQC6 194 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 ENC1O14682 589 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 PPIP5K2O43314 1243 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 TSPY3P0CV98 308 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 TSPY8P0CW00 308 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 PLCG1P19174 1290 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 EEF1GP26641 437 aaKnown RBP16.66■□□□□ 0.26
ATG4B-220ENST00000482507 HNRNPH2P55795 449 aaKnown RBP16.66■□□□□ 0.26
ATG4B-220ENST00000482507 MCM6Q14566 821 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 MFSD14BQ5SR56 506 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 TAF3Q5VWG9 929 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 RTFDC1Q9BY42 306 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-220ENST00000482507 PDE11AQ9HCR9 933 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 STX8Q9UNK0 236 aa16.66■□□□□ 0.26
ATG4B-220ENST00000482507 CTAGE15A4D2H0 777 aa16.65■□□□□ 0.26
ATG4B-220ENST00000482507 RCCD1A6NED2 376 aa16.65■□□□□ 0.26
ATG4B-220ENST00000482507 LDHBP07195 334 aaKnown RBP16.65■□□□□ 0.26
ATG4B-220ENST00000482507 CTAGE8P0CG41 777 aa16.65■□□□□ 0.26
ATG4B-220ENST00000482507 RASA1P20936 1047 aa16.65■□□□□ 0.26
ATG4B-220ENST00000482507 CTAGE6Q86UF2 777 aa16.65■□□□□ 0.26
ATG4B-220ENST00000482507 CTAGE4Q8IX94 777 aa16.65■□□□□ 0.26
ATG4B-220ENST00000482507 TTYH3Q9C0H2 523 aa16.65■□□□□ 0.26
ATG4B-220ENST00000482507 N4BP1O75113 896 aaKnown RBP16.65■□□□□ 0.26
ATG4B-220ENST00000482507 STK4Q13043 487 aa16.65■□□□□ 0.26
ATG4B-220ENST00000482507 TRAPPC11Q7Z392 1133 aa16.65■□□□□ 0.26
ATG4B-220ENST00000482507 WDR66Q8TBY9 1149 aa16.65■□□□□ 0.26
ATG4B-220ENST00000482507 PSMA7O14818 248 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 ECE2O60344 883 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 FCER1AP12319 257 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 GNAQP50148 359 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 SPTY2D1Q68D10 685 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-220ENST00000482507 ANKRD40Q6AI12 368 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 MAPKAPK5Q8IW41 473 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 RTKN2Q8IZC4 609 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 HPS3Q969F9 1004 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 TCP11L1Q9NUJ3 509 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 LRRC37AA6NMS7 1700 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 LTBP1Q14766 1721 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 ATP1A1P05023 1023 aaKnown RBP16.64■□□□□ 0.25
ATG4B-220ENST00000482507 PRPHP41219 470 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 MEA1Q16626 185 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 CC2D2BQ6DHV5 1058 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 CABP7Q86V35 215 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 CERS5Q8N5B7 392 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 CSGALNACT2Q8N6G5 542 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 TUBGCP2Q9BSJ2 902 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 TRIM9Q9C026 710 aa16.64■□□□□ 0.25
ATG4B-220ENST00000482507 SNED1Q8TER0 1413 aa16.63■□□□□ 0.25
ATG4B-220ENST00000482507 KLRF2D3W0D1 207 aa16.63■□□□□ 0.25
ATG4B-220ENST00000482507 POTEB2H3BUK9 544 aa16.63■□□□□ 0.25
ATG4B-220ENST00000482507 PSMD14O00487 310 aa16.63■□□□□ 0.25
ATG4B-220ENST00000482507 SRGAP2O75044 1071 aa16.63■□□□□ 0.25
ATG4B-220ENST00000482507 LETM2Q2VYF4 491 aa16.63■□□□□ 0.25
ATG4B-220ENST00000482507 MMTAG2Q9BU76 263 aaKnown RBP16.63■□□□□ 0.25
ATG4B-220ENST00000482507 LACRTQ9GZZ8 138 aa16.63■□□□□ 0.25
ATG4B-220ENST00000482507 ZMYND12Q9H0C1 365 aa16.63■□□□□ 0.25
ATG4B-220ENST00000482507 ADAM21Q9UKJ8 722 aa16.63■□□□□ 0.25
ATG4B-220ENST00000482507 MIIPQ5JXC2 388 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 GALNT17Q6IS24 598 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 HDXQ7Z353 690 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 ZNF444Q8N0Y2 327 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-220ENST00000482507 LARGE2Q8N3Y3 721 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 YDJCA8MPS7 323 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 CCNT1O60563 726 aaKnown RBP16.62■□□□□ 0.25
ATG4B-220ENST00000482507 MYL1P05976 194 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 OR52Z1P0C646 297 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 DNM2P50570 870 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms