RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 NDOR1Q9UHB4 597 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 SFMBT1Q9UHJ3 866 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 TMEM59LQ9UK28 342 aa8.31□□□□□ -1.08
SF3B1-210ENST00000482158 NOTOA8MTQ0 251 aa8.3□□□□□ -1.08
SF3B1-210ENST00000482158 HYAL3O43820 417 aaPredicted RBP8.3□□□□□ -1.08
SF3B1-210ENST00000482158 LTBRP36941 435 aa8.3□□□□□ -1.08
SF3B1-210ENST00000482158 ZMYM1Q5SVZ6 1142 aa8.3□□□□□ -1.08
SF3B1-210ENST00000482158 SLC23A3Q6PIS1 610 aa8.3□□□□□ -1.08
SF3B1-210ENST00000482158 MAMDC2Q7Z304 686 aaPredicted RBP8.3□□□□□ -1.08
SF3B1-210ENST00000482158 SLCO6A1Q86UG4 719 aa8.3□□□□□ -1.08
SF3B1-210ENST00000482158 NAT16Q8N8M0 369 aa8.3□□□□□ -1.08
SF3B1-210ENST00000482158 DIO2Q92813 273 aa8.3□□□□□ -1.08
SF3B1-210ENST00000482158 PHF20Q9BVI0 1012 aa8.3□□□□□ -1.08
SF3B1-210ENST00000482158 GPR27Q9NS67 375 aa8.3□□□□□ -1.08
SF3B1-210ENST00000482158 MBNL3Q9NUK0 354 aaKnown RBP8.3□□□□□ -1.08
SF3B1-210ENST00000482158 PCMTD2Q9NV79 361 aa8.3□□□□□ -1.08
SF3B1-210ENST00000482158 ANGEL1Q9UNK9 670 aaKnown RBP8.3□□□□□ -1.08
SF3B1-210ENST00000482158 C7orf72A4D263 438 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 PPP1R11O60927 126 aaPredicted RBP8.29□□□□□ -1.08
SF3B1-210ENST00000482158 DNAJC8O75937 253 aaPredicted RBP8.29□□□□□ -1.08
SF3B1-210ENST00000482158 TBC1D8O95759 1140 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 EFEMP2O95967 443 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 KCNAB2Q13303 367 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 LAPTM5Q13571 262 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 TM4SF20Q53R12 229 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 IQCEQ6IPM2 695 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 RSPO2Q6UXX9 243 aaPredicted RBP8.29□□□□□ -1.08
SF3B1-210ENST00000482158 BRAPQ7Z569 592 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 DHX37Q8IY37 1157 aaKnown RBP8.29□□□□□ -1.08
SF3B1-210ENST00000482158 NIM1KQ8IY84 436 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 JMJD8Q96S16 334 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 FBXL7Q9UJT9 491 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 PLAAQ9Y263 795 aa8.29□□□□□ -1.08
SF3B1-210ENST00000482158 TRBV23OR9-2A0A075B6M9 112 aa8.28□□□□□ -1.08
SF3B1-210ENST00000482158 FAM83GA6ND36 823 aa8.28□□□□□ -1.08
SF3B1-210ENST00000482158 USP2O75604 605 aaPredicted RBP8.28□□□□□ -1.08
SF3B1-210ENST00000482158 WNT11O96014 354 aa8.28□□□□□ -1.08
SF3B1-210ENST00000482158 KIR2DL1P43626 348 aaPredicted RBP8.28□□□□□ -1.08
SF3B1-210ENST00000482158 KIR2DL2P43627 348 aaPredicted RBP8.28□□□□□ -1.08
SF3B1-210ENST00000482158 MASP1P48740 699 aa8.28□□□□□ -1.08
SF3B1-210ENST00000482158 LRP8Q14114 963 aa8.28□□□□□ -1.08
SF3B1-210ENST00000482158 XP32Q5T750 250 aa8.28□□□□□ -1.08
SF3B1-210ENST00000482158 HLA-DQA1Q5Y7H0 255 aa8.28□□□□□ -1.08
SF3B1-210ENST00000482158 DPF3Q92784 378 aa8.28□□□□□ -1.08
SF3B1-210ENST00000482158 ZFYVE21Q9BQ24 234 aa8.28□□□□□ -1.08
SF3B1-210ENST00000482158 ANKRD62A6NC57 917 aa8.27□□□□□ -1.09
SF3B1-210ENST00000482158 IRS4O14654 1257 aaPredicted RBP8.27□□□□□ -1.09
SF3B1-210ENST00000482158 EFCAB14O75071 495 aa8.27□□□□□ -1.09
SF3B1-210ENST00000482158 RASGRP1O95267 797 aa8.27□□□□□ -1.09
SF3B1-210ENST00000482158 CRTAMO95727 393 aa8.27□□□□□ -1.09
SF3B1-210ENST00000482158 RNASE1P07998 156 aaKnown RBP8.27□□□□□ -1.09
SF3B1-210ENST00000482158 HK2P52789 917 aa8.27□□□□□ -1.09
SF3B1-210ENST00000482158 ERVFC1P60507 584 aa8.27□□□□□ -1.09
SF3B1-210ENST00000482158 GPR85P60893 370 aa8.27□□□□□ -1.09
SF3B1-210ENST00000482158 DUSP4Q13115 394 aa8.27□□□□□ -1.09
SF3B1-210ENST00000482158 PI4K2BQ8TCG2 481 aa8.27□□□□□ -1.09
SF3B1-210ENST00000482158 SLKQ9H2G2 1235 aaPredicted RBP8.27□□□□□ -1.09
SF3B1-210ENST00000482158 PCDHA9Q9Y5H5 950 aa8.27□□□□□ -1.09
SF3B1-210ENST00000482158 A0A087X0B3 334 aa8.26□□□□□ -1.09
SF3B1-210ENST00000482158 KIR3DS1Q14943 382 aa8.26□□□□□ -1.09
SF3B1-210ENST00000482158 PLCL1Q15111 1095 aa8.26□□□□□ -1.09
SF3B1-210ENST00000482158 HSF5Q4G112 596 aaPredicted RBP8.26□□□□□ -1.09
SF3B1-210ENST00000482158 LBX2Q6XYB7 198 aa8.26□□□□□ -1.09
SF3B1-210ENST00000482158 TP53INP2Q8IXH6 220 aa8.26□□□□□ -1.09
SF3B1-210ENST00000482158 IFNL3Q8IZI9 196 aa8.26□□□□□ -1.09
SF3B1-210ENST00000482158 ANKS4BQ8N8V4 417 aa8.26□□□□□ -1.09
SF3B1-210ENST00000482158 PDZD8Q8NEN9 1154 aa8.26□□□□□ -1.09
SF3B1-210ENST00000482158 MFSD3Q96ES6 412 aa8.26□□□□□ -1.09
SF3B1-210ENST00000482158 CDIP1Q9H305 208 aa8.26□□□□□ -1.09
SF3B1-210ENST00000482158 A0A1W2PQ45 241 aaPredicted RBP8.25□□□□□ -1.09
SF3B1-210ENST00000482158 A0A1W2PQY0 241 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 TCRBV16S1A1N1A0A5B0 115 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 AQP7O14520 342 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 KCNA6P17658 529 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 RTP1P59025 263 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 TIGD5Q53EQ6 642 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 CEP128Q6ZU80 1094 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 NLRP10Q86W26 655 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 NLGN2Q8NFZ4 835 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.25□□□□□ -1.09
SF3B1-210ENST00000482158 SYTL4Q96C24 671 aaPredicted RBP8.25□□□□□ -1.09
SF3B1-210ENST00000482158 PLCD4Q9BRC7 762 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 KRTAP4-8Q9BYQ9 185 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 PRKAB1Q9Y478 270 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 PCDHA8Q9Y5H6 950 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 PCDHA2Q9Y5H9 948 aa8.25□□□□□ -1.09
SF3B1-210ENST00000482158 TNPO3Q9Y5L0 923 aaKnown RBP8.25□□□□□ -1.09
SF3B1-210ENST00000482158 NRDCO43847 1150 aa8.24□□□□□ -1.09
SF3B1-210ENST00000482158 HPXP02790 462 aa8.24□□□□□ -1.09
SF3B1-210ENST00000482158 GDNFP39905 211 aa8.24□□□□□ -1.09
SF3B1-210ENST00000482158 ZNF460Q14592 562 aa8.24□□□□□ -1.09
SF3B1-210ENST00000482158 ZNF792Q3KQV3 632 aa8.24□□□□□ -1.09
SF3B1-210ENST00000482158 AGBL5Q8NDL9 886 aa8.24□□□□□ -1.09
SF3B1-210ENST00000482158 ASIC4Q96FT7 647 aa8.24□□□□□ -1.09
SF3B1-210ENST00000482158 INTS7Q9NVH2 962 aaKnown RBP8.24□□□□□ -1.09
SF3B1-210ENST00000482158 IFT57Q9NWB7 429 aa8.24□□□□□ -1.09
SF3B1-210ENST00000482158 MAGEC2Q9UBF1 373 aaPredicted RBP8.24□□□□□ -1.09
SF3B1-210ENST00000482158 PPARGC1AQ9UBK2 798 aaKnown RBP8.24□□□□□ -1.09
SF3B1-210ENST00000482158 FBLN5Q9UBX5 448 aa8.24□□□□□ -1.09
SF3B1-210ENST00000482158 TIMM13Q9Y5L4 95 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms