RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 RPGRIP1Q96KN7 1286 aa17.16■□□□□ 0.34
C9orf3-218ENST00000482056 PNKPQ96T60 521 aa17.16■□□□□ 0.34
C9orf3-218ENST00000482056 RAB34Q9BZG1 259 aa17.16■□□□□ 0.34
C9orf3-218ENST00000482056 STK17AQ9UEE5 414 aa17.16■□□□□ 0.34
C9orf3-218ENST00000482056 NHSQ6T4R5 1651 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 A0A1W2PQJ5 194 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 TECP42680 631 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 NFIXQ14938 502 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 GRIK5Q16478 980 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 WDR59Q6PJI9 974 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 TRAPPC11Q7Z392 1133 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 TBCKQ8TEA7 893 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 TSGA10Q9BZW7 698 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 DDX60LQ5H9U9 1706 aaKnown RBP17.15■□□□□ 0.34
C9orf3-218ENST00000482056 EIF3CLB5ME19 914 aaKnown RBP17.15■□□□□ 0.34
C9orf3-218ENST00000482056 HERVK_113P62684 666 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 CDK17Q00537 523 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 ANKRD40Q6AI12 368 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 USP17L2Q6R6M4 530 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 ERGIC2Q96RQ1 377 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 EIF3CQ99613 913 aaKnown RBP17.15■□□□□ 0.34
C9orf3-218ENST00000482056 TTYH3Q9C0H2 523 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 LRRC27Q9C0I9 530 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 CD209Q9NNX6 404 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 SAR1BQ9Y6B6 198 aa17.15■□□□□ 0.34
C9orf3-218ENST00000482056 UFL1O94874 794 aa17.14■□□□□ 0.33
C9orf3-218ENST00000482056 STK4Q13043 487 aa17.14■□□□□ 0.33
C9orf3-218ENST00000482056 ZSCAN29Q8IWY8 852 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-218ENST00000482056 TBC1D22AQ8WUA7 517 aa17.14■□□□□ 0.33
C9orf3-218ENST00000482056 PIGSQ96S52 555 aa17.14■□□□□ 0.33
C9orf3-218ENST00000482056 VAT1LQ9HCJ6 419 aa17.14■□□□□ 0.33
C9orf3-218ENST00000482056 ABCB6Q9NP58 842 aa17.14■□□□□ 0.33
C9orf3-218ENST00000482056 GGA1Q9UJY5 639 aa17.14■□□□□ 0.33
C9orf3-218ENST00000482056 L1RE1Q9UN81 338 aa17.14■□□□□ 0.33
C9orf3-218ENST00000482056 TAF1LQ8IZX4 1826 aa17.14■□□□□ 0.33
C9orf3-218ENST00000482056 PVALEFA0A1B0GWK0 134 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 IL1R1P14778 569 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 GPSM2P81274 684 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 MCM6Q14566 821 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 CALCRLQ16602 461 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 PAPD7Q5XG87 772 aaKnown RBP17.13■□□□□ 0.33
C9orf3-218ENST00000482056 WDR93Q6P2C0 686 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 CEP95Q96GE4 821 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 FAM163AQ96GL9 167 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-218ENST00000482056 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-218ENST00000482056 BIN2Q9UBW5 565 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-218ENST00000482056 LRWD1Q9UFC0 647 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 ANO9A1A5B4 782 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 TXKP42681 527 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.33
C9orf3-218ENST00000482056 ADCY7P51828 1080 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 SPA17Q15506 151 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 MAP9Q49MG5 647 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 NCAPH2Q6IBW4 605 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 IQCEQ6IPM2 695 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 PTF1AQ7RTS3 328 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 EXOC4Q96A65 974 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 NGLY1Q96IV0 654 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 CPVLQ9H3G5 476 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 RIOX1Q9H6W3 641 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 AGPAT5Q9NUQ2 364 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 TRIM10Q9UDY6 481 aa17.13■□□□□ 0.33
C9orf3-218ENST00000482056 ABCB11O95342 1321 aa17.12■□□□□ 0.33
C9orf3-218ENST00000482056 VSNL1P62760 191 aa17.12■□□□□ 0.33
C9orf3-218ENST00000482056 KIF5AQ12840 1032 aa17.12■□□□□ 0.33
C9orf3-218ENST00000482056 ASPRV1Q53RT3 343 aa17.12■□□□□ 0.33
C9orf3-218ENST00000482056 HSP90B2PQ58FF3 399 aa17.12■□□□□ 0.33
C9orf3-218ENST00000482056 UNC13DQ70J99 1090 aa17.12■□□□□ 0.33
C9orf3-218ENST00000482056 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
C9orf3-218ENST00000482056 RBM17Q96I25 401 aaKnown RBP17.12■□□□□ 0.33
C9orf3-218ENST00000482056 PSD3Q9NYI0 1048 aa17.12■□□□□ 0.33
C9orf3-218ENST00000482056 USO1O60763 962 aaKnown RBP17.11■□□□□ 0.33
C9orf3-218ENST00000482056 FCER1AP12319 257 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 NOVP48745 357 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 CENPPQ6IPU0 288 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 MMTAG2Q9BU76 263 aaKnown RBP17.11■□□□□ 0.33
C9orf3-218ENST00000482056 PDE11AQ9HCR9 933 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 ZCCHC17Q9NP64 241 aaKnown RBP17.11■□□□□ 0.33
C9orf3-218ENST00000482056 PLIN4Q96Q06 1357 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 ST5P78524 1137 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 PDIA5Q14554 519 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 MFSD14BQ5SR56 506 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 CCDC84Q86UT8 332 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-218ENST00000482056 NOA1Q8NC60 698 aaKnown RBP17.11■□□□□ 0.33
C9orf3-218ENST00000482056 LARP4BQ92615 738 aaKnown RBP17.11■□□□□ 0.33
C9orf3-218ENST00000482056 CCDC42Q96M95 316 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-218ENST00000482056 MTMR9Q96QG7 549 aa17.11■□□□□ 0.33
C9orf3-218ENST00000482056 GAKO14976 1311 aa17.1■□□□□ 0.33
C9orf3-218ENST00000482056 LY75O60449 1722 aa17.1■□□□□ 0.33
C9orf3-218ENST00000482056 TARSL2A2RTX5 802 aaKnown RBP17.1■□□□□ 0.33
C9orf3-218ENST00000482056 USP17L5A8MUK1 530 aa17.1■□□□□ 0.33
C9orf3-218ENST00000482056 H3BQF6 201 aa17.1■□□□□ 0.33
C9orf3-218ENST00000482056 ENC1O14682 589 aa17.1■□□□□ 0.33
C9orf3-218ENST00000482056 ATP1A1P05023 1023 aaKnown RBP17.1■□□□□ 0.33
C9orf3-218ENST00000482056 VAV2P52735 878 aa17.1■□□□□ 0.33
C9orf3-218ENST00000482056 USP14P54578 494 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms