RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 MUM1L1Q5H9M0 696 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 VPS53Q5VIR6 699 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 PSRC1Q6PGN9 363 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-217ENST00000481875 TLK2Q86UE8 772 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 MYLIPQ8WY64 445 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 INCENPQ9NQS7 918 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 ADD3Q9UEY8 706 aaKnown RBP13.61□□□□□ -0.23
GARNL3-217ENST00000481875 GRIN2DO15399 1336 aa13.61□□□□□ -0.23
GARNL3-217ENST00000481875 RANBP6O60518 1105 aaKnown RBP13.6□□□□□ -0.23
GARNL3-217ENST00000481875 SNHG28P0DPA3 235 aa13.6□□□□□ -0.23
GARNL3-217ENST00000481875 CSF2RAP15509 400 aa13.6□□□□□ -0.23
GARNL3-217ENST00000481875 IKQ13123 557 aaPredicted RBP13.6□□□□□ -0.23
GARNL3-217ENST00000481875 ITGA7Q13683 1181 aa13.6□□□□□ -0.23
GARNL3-217ENST00000481875 DUSP28Q4G0W2 176 aa13.6□□□□□ -0.23
GARNL3-217ENST00000481875 HERVK_113Q902F9 699 aa13.6□□□□□ -0.23
GARNL3-217ENST00000481875 VTI1AQ96AJ9 217 aa13.6□□□□□ -0.23
GARNL3-217ENST00000481875 AP5M1Q9H0R1 490 aa13.6□□□□□ -0.23
GARNL3-217ENST00000481875 ZNF576Q9H609 170 aa13.6□□□□□ -0.23
GARNL3-217ENST00000481875 IL23AQ9NPF7 189 aa13.6□□□□□ -0.23
GARNL3-217ENST00000481875 CCPG1Q9ULG6 757 aa13.6□□□□□ -0.23
GARNL3-217ENST00000481875 BDP1A6H8Y1 2624 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 HSPD1P10809 573 aaKnown RBP13.59□□□□□ -0.23
GARNL3-217ENST00000481875 FOSL2P15408 326 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 BEX3Q00994 111 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 GRIN2CQ14957 1233 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 CXCL17Q6UXB2 119 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 RGS22Q8NE09 1264 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 BBXQ8WY36 941 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-217ENST00000481875 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 TIFAQ96CG3 184 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 TMEM47Q9BQJ4 181 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 WDR19Q8NEZ3 1342 aa13.59□□□□□ -0.23
GARNL3-217ENST00000481875 DYNC1LI2O43237 492 aaPredicted RBP13.58□□□□□ -0.24
GARNL3-217ENST00000481875 AKNAD1Q5T1N1 836 aa13.58□□□□□ -0.24
GARNL3-217ENST00000481875 SYDE2Q5VT97 1194 aa13.58□□□□□ -0.24
GARNL3-217ENST00000481875 ZNF365Q70YC5 407 aa13.58□□□□□ -0.24
GARNL3-217ENST00000481875 DNERQ8NFT8 737 aa13.58□□□□□ -0.24
GARNL3-217ENST00000481875 PBX4Q9BYU1 374 aa13.58□□□□□ -0.24
GARNL3-217ENST00000481875 PDGFCQ9NRA1 345 aa13.58□□□□□ -0.24
GARNL3-217ENST00000481875 GBF1Q92538 1859 aa13.58□□□□□ -0.24
GARNL3-217ENST00000481875 REV3LO60673 3130 aa13.57□□□□□ -0.24
GARNL3-217ENST00000481875 A0A0D9SFI3 127 aa13.57□□□□□ -0.24
GARNL3-217ENST00000481875 NKRFO15226 690 aaKnown RBP eCLIP13.57□□□□□ -0.24
GARNL3-217ENST00000481875 PDHBP11177 359 aa13.57□□□□□ -0.24
GARNL3-217ENST00000481875 EDNRBP24530 442 aa13.57□□□□□ -0.24
GARNL3-217ENST00000481875 ALDH5A1P51649 535 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-217ENST00000481875 BAATQ14032 418 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-217ENST00000481875 RAB30Q15771 203 aa13.57□□□□□ -0.24
GARNL3-217ENST00000481875 TTBK2Q6IQ55 1244 aa13.57□□□□□ -0.24
GARNL3-217ENST00000481875 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
GARNL3-217ENST00000481875 CLEC4DQ8WXI8 215 aa13.57□□□□□ -0.24
GARNL3-217ENST00000481875 SYMPKQ92797 1274 aaKnown RBP13.57□□□□□ -0.24
GARNL3-217ENST00000481875 FAM227BQ96M60 508 aa13.57□□□□□ -0.24
GARNL3-217ENST00000481875 NOC4LQ9BVI4 516 aaKnown RBP13.57□□□□□ -0.24
GARNL3-217ENST00000481875 MTIF3Q9H2K0 278 aaKnown RBP13.57□□□□□ -0.24
GARNL3-217ENST00000481875 HIPK3Q9H422 1215 aa13.57□□□□□ -0.24
GARNL3-217ENST00000481875 POLR3EQ9NVU0 708 aa13.57□□□□□ -0.24
GARNL3-217ENST00000481875 LAMA4Q16363 1823 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 B4GALT4O60513 344 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 KPNA6O60684 536 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 FGBP02675 491 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 PFKMP08237 780 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 SUPT20HL2P0C7V6 817 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 CYP2C18P33260 490 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 MFAP1P55081 439 aaKnown RBP13.56□□□□□ -0.24
GARNL3-217ENST00000481875 ZNF543Q08ER8 600 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 GPATCH4Q5T3I0 446 aaKnown RBP13.56□□□□□ -0.24
GARNL3-217ENST00000481875 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 KIAA1211Q6ZU35 1233 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 RASGRP2Q7LDG7 609 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 DGKHQ86XP1 1220 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 FBXO16Q8IX29 292 aaPredicted RBP13.56□□□□□ -0.24
GARNL3-217ENST00000481875 RPUSD2Q8IZ73 545 aaKnown RBP13.56□□□□□ -0.24
GARNL3-217ENST00000481875 ANKS1AQ92625 1134 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 VWCEQ96DN2 955 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 WDR11Q9BZH6 1224 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 ALDH8A1Q9H2A2 487 aaPredicted RBP13.56□□□□□ -0.24
GARNL3-217ENST00000481875 ISY1Q9ULR0 285 aaKnown RBP13.56□□□□□ -0.24
GARNL3-217ENST00000481875 KIAA1217Q5T5P2 1943 aa13.56□□□□□ -0.24
GARNL3-217ENST00000481875 MYH6P13533 1939 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 NFIBO00712 420 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
GARNL3-217ENST00000481875 SDSP20132 328 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 SLC16A2P36021 539 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 CPT1AP50416 773 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 SNAP25P60880 206 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 PURAQ00577 322 aaKnown RBP13.55□□□□□ -0.24
GARNL3-217ENST00000481875 CCDC96Q2M329 555 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 CCDC178Q5BJE1 867 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 BMP2KLQ5H9B9 411 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 MFSD6Q6ZSS7 791 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 ZNF589Q86UQ0 364 aaPredicted RBP13.55□□□□□ -0.24
GARNL3-217ENST00000481875 MPHOSPH6Q99547 160 aaKnown RBP13.55□□□□□ -0.24
GARNL3-217ENST00000481875 PPP1R12CQ9BZL4 782 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 WNT8AQ9H1J5 351 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
GARNL3-217ENST00000481875 CCDC171Q6TFL3 1326 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 XIRP2A4UGR9 3374 aa13.55□□□□□ -0.24
GARNL3-217ENST00000481875 TRIP12Q14669 1992 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms