RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 CTSKP43235 329 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 PPP2R2AP63151 447 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 C2orf27AQ580R0 203 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 ADGRF1Q5T601 910 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 CEP128Q6ZU80 1094 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 JAZF1Q86VZ6 243 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 LILRB2Q8N423 598 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 SH3TC2Q8TF17 1288 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 CDC6Q99741 560 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 PLCD4Q9BRC7 762 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 AARSD1Q9BTE6 412 aaKnown RBP5.63□□□□□ -1.51
CBX3-207ENST00000481300 GPR55Q9Y2T6 319 aaPredicted RBP5.63□□□□□ -1.51
CBX3-207ENST00000481300 MRPL42Q9Y6G3 142 aaKnown RBP5.63□□□□□ -1.51
CBX3-207ENST00000481300 TRAV20A0A0B4J274 112 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 OR14I1A6ND48 311 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 VAMP4O75379 141 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 ENDOUP21128 410 aaKnown RBP5.62□□□□□ -1.51
CBX3-207ENST00000481300 CEBPAP49715 358 aaPredicted RBP5.62□□□□□ -1.51
CBX3-207ENST00000481300 LONRF2Q1L5Z9 754 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 DPY19L1Q2PZI1 675 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 ZC3H12BQ5HYM0 836 aaKnown RBP5.62□□□□□ -1.51
CBX3-207ENST00000481300 GTF2IRD2BQ6EKJ0 949 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 LILRA6Q6PI73 481 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 GTF2IRD2Q86UP8 949 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 ZBTB38Q8NAP3 1195 aaPredicted RBP5.62□□□□□ -1.51
CBX3-207ENST00000481300 ZSWIM2Q8NEG5 633 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 BTN2A2Q8WVV5 523 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 MRGPRX3Q96LB0 322 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 TBX22Q9Y458 520 aa5.62□□□□□ -1.51
CBX3-207ENST00000481300 FADS2P1A8MWK0 482 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 STXBP3O00186 592 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 TBX1O43435 398 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 SNRPB2P08579 225 aaKnown RBP5.61□□□□□ -1.51
CBX3-207ENST00000481300 INHBBP09529 407 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 FAM153BP0C7A2 387 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 VAV1P15498 845 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 SDHBP21912 280 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 KCNJ6P48051 423 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 SSPNQ14714 243 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 KIR3DS1Q14943 382 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 SLC14A2Q15849 920 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 TMEM132EQ6IEE7 984 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 SDE2Q6IQ49 451 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 RNPC3Q96LT9 517 aaKnown RBP5.61□□□□□ -1.51
CBX3-207ENST00000481300 CCDC140Q96MF4 163 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 CDADC1Q9BWV3 514 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 NKX2-4Q9H2Z4 354 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 CRTAC1Q9NQ79 661 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 ARHGEF4Q9NR80 690 aa5.61□□□□□ -1.51
CBX3-207ENST00000481300 LOC105371045A0A1W2PR82 267 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 ADCY3O60266 1144 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 CLSTN1O94985 981 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 ZNF205O95201 554 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 GSTM1P09488 218 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 HOXC12P31275 282 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 SEPHS1P49903 392 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 RTP1P59025 263 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 HOMER1Q86YM7 354 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 NAT16Q8N8M0 369 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 APPBP2Q92624 585 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 FCRL2Q96LA5 508 aaPredicted RBP5.6□□□□□ -1.51
CBX3-207ENST00000481300 IER2Q9BTL4 223 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 CYP26B1Q9NR63 512 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 RAPGEFL1Q9UHV5 662 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 MBD1Q9UIS9 605 aaPredicted RBP5.6□□□□□ -1.51
CBX3-207ENST00000481300 CNOT6Q9ULM6 557 aaKnown RBP5.6□□□□□ -1.51
CBX3-207ENST00000481300 BACE2Q9Y5Z0 518 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 PTCH2Q9Y6C5 1203 aa5.6□□□□□ -1.51
CBX3-207ENST00000481300 C2orf71A6NGG8 1288 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 HRKO00198 91 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 AURKAO14965 403 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 PRODHO43272 600 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 CDC45O75419 566 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 CPP00450 1065 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 FGFR1P11362 822 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 PABPC1P11940 636 aaKnown RBP5.59□□□□□ -1.51
CBX3-207ENST00000481300 IFNGR1P15260 489 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 PNLIPP16233 465 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 ECI1P42126 302 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 GRIA2P42262 883 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 SRSF3P84103 164 aaKnown RBP5.59□□□□□ -1.51
CBX3-207ENST00000481300 SCRN1Q12765 414 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 HSF5Q4G112 596 aaPredicted RBP5.59□□□□□ -1.51
CBX3-207ENST00000481300 EEF1DP3Q658K8 133 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 NSMFQ6X4W1 530 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 SCUBE1Q8IWY4 988 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 JMYQ8N9B5 988 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 KCTD13Q8WZ19 329 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 FCRL3Q96P31 734 aaPredicted RBP5.59□□□□□ -1.51
CBX3-207ENST00000481300 SLC12A9Q9BXP2 914 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 FANCLQ9NW38 375 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 ERVK13-1Q9NX77 482 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 TNFRSF10DQ9UBN6 386 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 KCTD3Q9Y597 815 aa5.59□□□□□ -1.51
CBX3-207ENST00000481300 TRBV23-1A0A0A0MS06 115 aa5.58□□□□□ -1.52
CBX3-207ENST00000481300 CCDC163A0A0D9SF12 145 aa5.58□□□□□ -1.52
CBX3-207ENST00000481300 ESYT3A0FGR9 886 aa5.58□□□□□ -1.52
CBX3-207ENST00000481300 VIPR1P32241 457 aa5.58□□□□□ -1.52
CBX3-207ENST00000481300 EPHB3P54753 998 aa5.58□□□□□ -1.52
CBX3-207ENST00000481300 GFRA1P56159 465 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms