RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 RRP12Q5JTH9 1297 aaKnown RBP10.37□□□□□ -0.75
DDX56-211ENST00000479602 RASIP1Q5U651 963 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 SNRNP48Q6IEG0 339 aaKnown RBP10.37□□□□□ -0.75
DDX56-211ENST00000479602 APOA5Q6Q788 366 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 FAM133AQ8N9E0 248 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 RGS22Q8NE09 1264 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 CHST13Q8NET6 341 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 MTMR8Q96EF0 704 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 ZNF274Q96GC6 653 aaPredicted RBP10.37□□□□□ -0.75
DDX56-211ENST00000479602 CDX2Q99626 313 aaPredicted RBP10.37□□□□□ -0.75
DDX56-211ENST00000479602 KAT14Q9H8E8 782 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 INCENPQ9NQS7 918 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 TOMM22Q9NS69 142 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 FEM1BQ9UK73 627 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 TBX21Q9UL17 535 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 FAM184BQ9ULE4 1060 aa10.37□□□□□ -0.75
DDX56-211ENST00000479602 ELP1O95163 1332 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 CCDC196A0A1B0GTZ2 297 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 MYADML2A6NDP7 307 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 MOXD2PA6NHM9 499 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 NMT2O60551 498 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 CLTBP09497 229 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 BMP3P12645 472 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 KIF5BP33176 963 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 IRX5P78411 483 aaPredicted RBP10.36□□□□□ -0.75
DDX56-211ENST00000479602 GHRHRQ02643 423 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 TRAF1Q13077 416 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 ACVR2BQ13705 512 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 GRM4Q14833 912 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 KCNA10Q16322 511 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 CATIPQ7Z7H3 387 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 ZNF654Q8IZM8 581 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 SLC43A3Q8NBI5 491 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 CHURC1Q8WUH1 139 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 LENG1Q96BZ8 264 aaPredicted RBP10.36□□□□□ -0.75
DDX56-211ENST00000479602 SPZ1Q9BXG8 430 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 ABHD16BQ9H3Z7 469 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 RAVER2Q9HCJ3 691 aaKnown RBP10.36□□□□□ -0.75
DDX56-211ENST00000479602 RBM28Q9NW13 759 aaKnown RBP10.36□□□□□ -0.75
DDX56-211ENST00000479602 PRKAG2Q9UGJ0 569 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 CNPY2Q9Y2B0 182 aa10.36□□□□□ -0.75
DDX56-211ENST00000479602 CHD7Q9P2D1 2997 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 ASTN1O14525 1302 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 SYNRGQ9UMZ2 1314 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 LTBP2Q14767 1821 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 hCG_1984214I3L0E3 225 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 ZBED4O75132 1171 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 SLC1A4P43007 532 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 STAT2P52630 851 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 TOB2Q14106 344 aaPredicted RBP10.35□□□□□ -0.75
DDX56-211ENST00000479602 SLFN13Q68D06 897 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 ZNF713Q8N859 430 aaPredicted RBP10.35□□□□□ -0.75
DDX56-211ENST00000479602 MORC4Q8TE76 937 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 RIOX1Q9H6W3 641 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.35□□□□□ -0.75
DDX56-211ENST00000479602 FBXO40Q9UH90 709 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 GNEQ9Y223 722 aaKnown RBP10.35□□□□□ -0.75
DDX56-211ENST00000479602 BDP1A6H8Y1 2624 aa10.35□□□□□ -0.75
DDX56-211ENST00000479602 TMEM265A0A087WTH1 108 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 TIMP1P01033 207 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 CD4P01730 458 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 CNTN2Q02246 1040 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 COL9A3Q14050 684 aaPredicted RBP10.34□□□□□ -0.75
DDX56-211ENST00000479602 CCDC144BQ3MJ40 725 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 CPXCR1Q8N123 301 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 SAMD3Q8N6K7 520 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 KIFC2Q96AC6 838 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 VWCEQ96DN2 955 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 DDX11Q96FC9 970 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 COL25A1Q9BXS0 654 aaPredicted RBP10.34□□□□□ -0.75
DDX56-211ENST00000479602 RANBP17Q9H2T7 1088 aaKnown RBP10.34□□□□□ -0.75
DDX56-211ENST00000479602 SH2B1Q9NRF2 756 aaPredicted RBP10.34□□□□□ -0.75
DDX56-211ENST00000479602 MAD2L2Q9UI95 211 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
DDX56-211ENST00000479602 GRIN2DO15399 1336 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 COL11A1P12107 1806 aaPredicted RBP10.33□□□□□ -0.76
DDX56-211ENST00000479602 LOC102724159A0A0B4J2E5 919 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 CCDC69A6NI79 296 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 TMEM232C9JQI7 657 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 ARVCFO00192 962 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 ZBTB43O43298 467 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 ST18O60284 1047 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 PARP1P09874 1014 aaKnown RBP10.33□□□□□ -0.76
DDX56-211ENST00000479602 FUT2Q10981 343 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 PWP2Q15269 919 aaKnown RBP10.33□□□□□ -0.76
DDX56-211ENST00000479602 TKFCQ3LXA3 575 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 MFSD5Q6N075 450 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 TAPT1Q6NXT6 567 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 SAMD1Q6SPF0 538 aaPredicted RBP10.33□□□□□ -0.76
DDX56-211ENST00000479602 SYNE3Q6ZMZ3 975 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 Q6ZUG5 572 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 ARMCX2Q7L311 632 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 CCDC144CPQ8IYA2 1237 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 STK11IPQ8N1F8 1099 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 LRRC47Q8N1G4 583 aaKnown RBP10.33□□□□□ -0.76
DDX56-211ENST00000479602 FANCBQ8NB91 859 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 CTCFLQ8NI51 663 aaPredicted RBP10.33□□□□□ -0.76
DDX56-211ENST00000479602 NUP133Q8WUM0 1156 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 SNX21Q969T3 373 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms