RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CKAP4Q07065 602 aaKnown RBP27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 GRIK5Q16478 980 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 FOXR2Q6PJQ5 311 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 REXO1Q8N1G1 1221 aaKnown RBP27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 ABCB6Q9NP58 842 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 SAP30BPQ9UHR5 308 aaKnown RBP27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 GOLGA8HP0CJ92 632 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 IL1R1P14778 569 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 FKBP15Q5T1M5 1219 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 KIAA1328Q86T90 577 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 TEX11Q8IYF3 940 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 RIOX1Q9H6W3 641 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 SAR1BQ9Y6B6 198 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 BTAF1O14981 1849 aa27.5■■□□□ 1.99
SYNGAP1-206ENST00000479510 PLIN4Q96Q06 1357 aa27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 ATP2B4P23634 1241 aa27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 MTIF2P46199 727 aaKnown RBP27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 FXR2P51116 673 aaKnown RBP eCLIP27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 STK4Q13043 487 aa27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 CENPPQ6IPU0 288 aa27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 JAKMIP2Q96AA8 810 aa27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 MMTAG2Q9BU76 263 aaKnown RBP27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 TSGA10Q9BZW7 698 aa27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 ACBD3Q9H3P7 528 aa27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 NHSQ6T4R5 1651 aa27.49■■□□□ 1.99
SYNGAP1-206ENST00000479510 FGFR1OPO95684 399 aaKnown RBP27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 HNRNPH3P31942 346 aaKnown RBP27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 VSNL1P62760 191 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 NOC4LQ9BVI4 516 aaKnown RBP27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 ERICH4A6NGS2 130 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 RASSF10A6NK89 507 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 RHOXF2BP0C7M4 288 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 NFIXQ14938 502 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 MIIPQ5JXC2 388 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 SV2BQ7L1I2 683 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 TBCKQ8TEA7 893 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 MTMR9Q96QG7 549 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 PURBQ96QR8 312 aaKnown RBP27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 RHOXF2Q9BQY4 288 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 LRRC27Q9C0I9 530 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 NHEJ1Q9H9Q4 299 aaPredicted RBP27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 CD209Q9NNX6 404 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 CDK5RAP2Q96SN8 1893 aa27.48■■□□□ 1.99
SYNGAP1-206ENST00000479510 TARSL2A2RTX5 802 aaKnown RBP27.47■■□□□ 1.99
SYNGAP1-206ENST00000479510 CNBD1Q8NA66 436 aa27.47■■□□□ 1.99
SYNGAP1-206ENST00000479510 RAB34Q9BZG1 259 aa27.47■■□□□ 1.99
SYNGAP1-206ENST00000479510 LTBP4Q8N2S1 1624 aa27.47■■□□□ 1.99
SYNGAP1-206ENST00000479510 TECP42680 631 aa27.47■■□□□ 1.99
SYNGAP1-206ENST00000479510 NOA1Q8NC60 698 aaKnown RBP27.47■■□□□ 1.99
SYNGAP1-206ENST00000479510 ZCCHC17Q9NP64 241 aaKnown RBP27.47■■□□□ 1.99
SYNGAP1-206ENST00000479510 AGPAT5Q9NUQ2 364 aa27.47■■□□□ 1.99
SYNGAP1-206ENST00000479510 TRIM10Q9UDY6 481 aa27.47■■□□□ 1.99
SYNGAP1-206ENST00000479510 GAKO14976 1311 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 H3BQF6 201 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 RFC4P35249 363 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 USP14P54578 494 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 PDIA5Q14554 519 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 TMEM266Q2M3C6 531 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 USP17L2Q6R6M4 530 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 UNC13DQ70J99 1090 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 TBC1D22AQ8WUA7 517 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 VIPAS39Q9H9C1 493 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 MTMR7Q9Y216 660 aa27.46■■□□□ 1.99
SYNGAP1-206ENST00000479510 TRAPPC3LQ5T215 181 aa27.45■■□□□ 1.99
SYNGAP1-206ENST00000479510 NCAPH2Q6IBW4 605 aa27.45■■□□□ 1.99
SYNGAP1-206ENST00000479510 CERKQ8TCT0 537 aa27.45■■□□□ 1.99
SYNGAP1-206ENST00000479510 CEP95Q96GE4 821 aa27.45■■□□□ 1.99
SYNGAP1-206ENST00000479510 ASPRV1Q53RT3 343 aa27.45■■□□□ 1.98
SYNGAP1-206ENST00000479510 PIGSQ96S52 555 aa27.45■■□□□ 1.98
SYNGAP1-206ENST00000479510 ADAM21Q9UKJ8 722 aa27.45■■□□□ 1.98
SYNGAP1-206ENST00000479510 RHBDL3P58872 404 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 MCM6Q14566 821 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 CASP8Q14790 479 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 MAP9Q49MG5 647 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 MUM1L1Q5H9M0 696 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 PPP1R18Q6NYC8 613 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 PTF1AQ7RTS3 328 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 GUF1Q8N442 669 aaKnown RBP27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 KIAA0895Q8NCT3 520 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 PDE11AQ9HCR9 933 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 ATP1A1P05023 1023 aaKnown RBP27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 FCER1AP12319 257 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 VAV2P52735 878 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 GPSM2P81274 684 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 LRRC63Q05C16 580 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 GRB10Q13322 594 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 CALCRLQ16602 461 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 IQCEQ6IPM2 695 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 ARHGAP27Q6ZUM4 889 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 CCDC84Q86UT8 332 aaPredicted RBP27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 SEMA6BQ9H3T3 888 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 LRWD1Q9UFC0 647 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 PLAGL2Q9UPG8 496 aa27.44■■□□□ 1.98
SYNGAP1-206ENST00000479510 TFRCP02786 760 aaKnown RBP27.43■■□□□ 1.98
SYNGAP1-206ENST00000479510 ST5P78524 1137 aa27.43■■□□□ 1.98
SYNGAP1-206ENST00000479510 PSMD2Q13200 908 aa27.43■■□□□ 1.98
SYNGAP1-206ENST00000479510 VWA3BQ502W6 1294 aa27.43■■□□□ 1.98
SYNGAP1-206ENST00000479510 RPGRQ92834 1020 aaKnown RBP27.43■■□□□ 1.98
SYNGAP1-206ENST00000479510 PCMTD1Q96MG8 357 aaPredicted RBP27.43■■□□□ 1.98
SYNGAP1-206ENST00000479510 MED4Q9NPJ6 270 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms