RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 VTI1AQ96AJ9 217 aa18.51■□□□□ 0.55
GARNL3-215ENST00000478702 CHMP4CQ96CF2 233 aa18.51■□□□□ 0.55
GARNL3-215ENST00000478702 ZKSCAN3Q9BRR0 538 aa18.51■□□□□ 0.55
GARNL3-215ENST00000478702 KRT23Q9C075 422 aa18.51■□□□□ 0.55
GARNL3-215ENST00000478702 SPC25Q9HBM1 224 aa18.51■□□□□ 0.55
GARNL3-215ENST00000478702 HOMER2Q9NSB8 354 aa18.51■□□□□ 0.55
GARNL3-215ENST00000478702 MTMR7Q9Y216 660 aa18.51■□□□□ 0.55
GARNL3-215ENST00000478702 SOWAHBA6NEL2 793 aa18.5■□□□□ 0.55
GARNL3-215ENST00000478702 CYP21A2P08686 494 aa18.5■□□□□ 0.55
GARNL3-215ENST00000478702 PDHBP11177 359 aa18.5■□□□□ 0.55
GARNL3-215ENST00000478702 CYP2C18P33260 490 aa18.5■□□□□ 0.55
GARNL3-215ENST00000478702 CCDC178Q5BJE1 867 aa18.5■□□□□ 0.55
GARNL3-215ENST00000478702 DGKHQ86XP1 1220 aa18.5■□□□□ 0.55
GARNL3-215ENST00000478702 SLC43A3Q8NBI5 491 aa18.5■□□□□ 0.55
GARNL3-215ENST00000478702 PRDM12Q9H4Q4 367 aa18.5■□□□□ 0.55
GARNL3-215ENST00000478702 A1CFQ9NQ94 594 aaKnown RBP18.5■□□□□ 0.55
GARNL3-215ENST00000478702 CXXC1Q9P0U4 656 aaPredicted RBP18.5■□□□□ 0.55
GARNL3-215ENST00000478702 GNEQ9Y223 722 aaKnown RBP18.5■□□□□ 0.55
GARNL3-215ENST00000478702 DDX49Q9Y6V7 483 aaKnown RBP18.5■□□□□ 0.55
GARNL3-215ENST00000478702 TNKSO95271 1327 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 UMODL1Q5DID0 1318 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 CHD7Q9P2D1 2997 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 REV3LO60673 3130 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 SNHG28P0DPA3 235 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 ADGRE1Q14246 886 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 PSRC1Q6PGN9 363 aaPredicted RBP18.49■□□□□ 0.55
GARNL3-215ENST00000478702 CXCL17Q6UXB2 119 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 BTNL9Q6UXG8 535 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 ENAHQ8N8S7 591 aaPredicted RBP18.49■□□□□ 0.55
GARNL3-215ENST00000478702 AGBL1Q96MI9 1066 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 ESYT1Q9BSJ8 1104 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 ACAD9Q9H845 621 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 PRR12Q9ULL5 1215 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 GRIN2DO15399 1336 aa18.49■□□□□ 0.55
GARNL3-215ENST00000478702 TLR3O15455 904 aaKnown RBP18.48■□□□□ 0.55
GARNL3-215ENST00000478702 TNFAIP2Q03169 654 aa18.48■□□□□ 0.55
GARNL3-215ENST00000478702 CCDC174Q6PII3 467 aa18.48■□□□□ 0.55
GARNL3-215ENST00000478702 PPM1EQ8WY54 764 aa18.48■□□□□ 0.55
GARNL3-215ENST00000478702 HERVK_113Q902F9 699 aa18.48■□□□□ 0.55
GARNL3-215ENST00000478702 ANKS1AQ92625 1134 aa18.48■□□□□ 0.55
GARNL3-215ENST00000478702 MAP4K1Q92918 833 aa18.48■□□□□ 0.55
GARNL3-215ENST00000478702 ZSCAN10Q96SZ4 725 aaPredicted RBP18.48■□□□□ 0.55
GARNL3-215ENST00000478702 GAS2L1Q99501 681 aaPredicted RBP18.48■□□□□ 0.55
GARNL3-215ENST00000478702 IL23AQ9NPF7 189 aa18.48■□□□□ 0.55
GARNL3-215ENST00000478702 RNF146Q9NTX7 359 aa18.48■□□□□ 0.55
GARNL3-215ENST00000478702 ZSWIM5Q9P217 1185 aa18.48■□□□□ 0.55
GARNL3-215ENST00000478702 RBM8AQ9Y5S9 174 aaKnown RBP18.48■□□□□ 0.55
GARNL3-215ENST00000478702 FRMPD2Q68DX3 1309 aaPredicted RBP18.48■□□□□ 0.55
GARNL3-215ENST00000478702 PTPRSQ13332 1948 aa18.47■□□□□ 0.55
GARNL3-215ENST00000478702 ZNF543Q08ER8 600 aa18.47■□□□□ 0.55
GARNL3-215ENST00000478702 TMEM63BQ5T3F8 832 aa18.47■□□□□ 0.55
GARNL3-215ENST00000478702 TTBK2Q6IQ55 1244 aa18.47■□□□□ 0.55
GARNL3-215ENST00000478702 PNMA1Q8ND90 353 aa18.47■□□□□ 0.55
GARNL3-215ENST00000478702 UBAC1Q9BSL1 405 aa18.47■□□□□ 0.55
GARNL3-215ENST00000478702 LSG1Q9H089 658 aaKnown RBP18.47■□□□□ 0.55
GARNL3-215ENST00000478702 TAF6LQ9Y6J9 622 aa18.47■□□□□ 0.55
GARNL3-215ENST00000478702 TRIP12Q14669 1992 aaPredicted RBP18.47■□□□□ 0.55
GARNL3-215ENST00000478702 TANC1Q9C0D5 1861 aa18.47■□□□□ 0.55
GARNL3-215ENST00000478702 SCN10AQ9Y5Y9 1956 aa18.46■□□□□ 0.55
GARNL3-215ENST00000478702 SMPD1P17405 629 aa18.46■□□□□ 0.55
GARNL3-215ENST00000478702 SYDE2Q5VT97 1194 aa18.46■□□□□ 0.55
GARNL3-215ENST00000478702 STOX1Q6ZVD7 989 aa18.46■□□□□ 0.55
GARNL3-215ENST00000478702 CYB5R4Q7L1T6 521 aa18.46■□□□□ 0.55
GARNL3-215ENST00000478702 TLK2Q86UE8 772 aa18.46■□□□□ 0.55
GARNL3-215ENST00000478702 VWCEQ96DN2 955 aa18.46■□□□□ 0.55
GARNL3-215ENST00000478702 RANBP17Q9H2T7 1088 aaKnown RBP18.46■□□□□ 0.55
GARNL3-215ENST00000478702 KAT14Q9H8E8 782 aa18.46■□□□□ 0.55
GARNL3-215ENST00000478702 PDGFCQ9NRA1 345 aa18.46■□□□□ 0.55
GARNL3-215ENST00000478702 YBX2Q9Y2T7 364 aaKnown RBP18.46■□□□□ 0.55
GARNL3-215ENST00000478702 TNFRSF10AO00220 468 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 SLC16A2P36021 539 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 SNAP25P60880 206 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 TRDNQ13061 729 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 ITGA7Q13683 1181 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 SEC23AQ15436 765 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 TKFCQ3LXA3 575 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 MUM1L1Q5H9M0 696 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 GPATCH4Q5T3I0 446 aaKnown RBP18.45■□□□□ 0.54
GARNL3-215ENST00000478702 TAPT1Q6NXT6 567 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 KIAA1211Q6ZU35 1233 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 TET1Q8NFU7 2136 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 TRERF1Q96PN7 1200 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 WNT8AQ9H1J5 351 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 NKX2-4Q9H2Z4 354 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 HIPK3Q9H422 1215 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 GPCPD1Q9NPB8 672 aa18.45■□□□□ 0.54
GARNL3-215ENST00000478702 ASB14A6NK59 587 aa18.44■□□□□ 0.54
GARNL3-215ENST00000478702 E7EWF7 191 aa18.44■□□□□ 0.54
GARNL3-215ENST00000478702 B4GALT4O60513 344 aa18.44■□□□□ 0.54
GARNL3-215ENST00000478702 CDC45O75419 566 aa18.44■□□□□ 0.54
GARNL3-215ENST00000478702 CABYRO75952 493 aa18.44■□□□□ 0.54
GARNL3-215ENST00000478702 FGBP02675 491 aa18.44■□□□□ 0.54
GARNL3-215ENST00000478702 CENPBP07199 599 aaPredicted RBP18.44■□□□□ 0.54
GARNL3-215ENST00000478702 ALAS1P13196 640 aa18.44■□□□□ 0.54
GARNL3-215ENST00000478702 CCL23P55773 120 aa18.44■□□□□ 0.54
GARNL3-215ENST00000478702 RAB30Q15771 203 aa18.44■□□□□ 0.54
GARNL3-215ENST00000478702 FSCN1Q16658 493 aaKnown RBP18.44■□□□□ 0.54
GARNL3-215ENST00000478702 NOL8Q76FK4 1167 aaKnown RBP18.44■□□□□ 0.54
GARNL3-215ENST00000478702 OTOP2Q7RTS6 562 aa18.44■□□□□ 0.54
GARNL3-215ENST00000478702 RALYLQ86SE5 291 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms