RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 USP17L10C9JJH3 530 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 ZBTB5O15062 677 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 WDR46O15213 610 aaKnown RBP12.86□□□□□ -0.35
LSG1-207ENST00000475763 NCLP19338 710 aaKnown RBP12.86□□□□□ -0.35
LSG1-207ENST00000475763 GNA11P29992 359 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 STAT2P52630 851 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 NPY5RQ15761 445 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 MAP3K11Q16584 847 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
LSG1-207ENST00000475763 ZNF697Q5TEC3 545 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 SYDE2Q5VT97 1194 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 FAM173BQ6P4H8 233 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
LSG1-207ENST00000475763 HOMER1Q86YM7 354 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 TEX2Q8IWB9 1127 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 ZNF280CQ8ND82 737 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 PIBF1Q8WXW3 757 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 ZMYND12Q9H0C1 365 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 VAT1LQ9HCJ6 419 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 FEM1BQ9UK73 627 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 ISY1Q9ULR0 285 aaKnown RBP12.86□□□□□ -0.35
LSG1-207ENST00000475763 PCDHA4Q9UN74 947 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 OTOFQ9HC10 1997 aa12.86□□□□□ -0.35
LSG1-207ENST00000475763 UNCXA6NJT0 531 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 IRF6O14896 467 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 FIBPO43427 364 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 PRPF40AO75400 957 aaKnown RBP12.85□□□□□ -0.35
LSG1-207ENST00000475763 YEATS4O95619 227 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 MBD3O95983 291 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 SLC16A2P36021 539 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 NAPAP54920 295 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 BACE1P56817 501 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 RILPL1Q5EBL4 403 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 FAM83BQ5T0W9 1011 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 BLIDQ8IZY5 108 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 BICD2Q8TD16 824 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 LEO1Q8WVC0 666 aaPredicted RBP12.85□□□□□ -0.35
LSG1-207ENST00000475763 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.35
LSG1-207ENST00000475763 ZKSCAN4Q969J2 545 aaPredicted RBP12.85□□□□□ -0.35
LSG1-207ENST00000475763 CHAMP1Q96JM3 812 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 SPATA32Q96LK8 384 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 GLT8D2Q9H1C3 349 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 C6orf50Q9HD87 102 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 POLR3EQ9NVU0 708 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 RTEL1Q9NZ71 1219 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 RCOR1Q9UKL0 485 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 CSADQ9Y600 493 aa12.85□□□□□ -0.35
LSG1-207ENST00000475763 TULP1O00294 542 aaPredicted RBP12.84□□□□□ -0.35
LSG1-207ENST00000475763 TRAK2O60296 914 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 TRAPPC10P48553 1259 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 NASPP49321 788 aaPredicted RBP12.84□□□□□ -0.35
LSG1-207ENST00000475763 UBE2HP62256 183 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 SPP2Q13103 211 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 IKQ13123 557 aaPredicted RBP12.84□□□□□ -0.35
LSG1-207ENST00000475763 CDC37Q16543 378 aaPredicted RBP12.84□□□□□ -0.35
LSG1-207ENST00000475763 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.84□□□□□ -0.35
LSG1-207ENST00000475763 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 LDHDQ86WU2 507 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 ANKRD13AQ8IZ07 590 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 FAM160A2Q8N612 972 aaPredicted RBP12.84□□□□□ -0.35
LSG1-207ENST00000475763 TNFRSF25Q93038 417 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 USP28Q96RU2 1077 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 NUP88Q99567 741 aaPredicted RBP12.84□□□□□ -0.35
LSG1-207ENST00000475763 GLIS2Q9BZE0 524 aaPredicted RBP12.84□□□□□ -0.35
LSG1-207ENST00000475763 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.84□□□□□ -0.35
LSG1-207ENST00000475763 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
LSG1-207ENST00000475763 MORC2Q9Y6X9 1032 aaPredicted RBP12.84□□□□□ -0.35
LSG1-207ENST00000475763 M0R2N6 131 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 FDX1P10109 184 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 NR5A1Q13285 461 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 MTMR2Q13614 643 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 VGLL4Q14135 290 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 QRICH1Q2TAL8 776 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 KLHL40Q2TBA0 621 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 SH3D19Q5HYK7 790 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 ANO1Q5XXA6 986 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.36
LSG1-207ENST00000475763 KCNG4Q8TDN1 519 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 ANP32EQ9BTT0 268 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 AMNQ9BXJ7 453 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 RRAGCQ9HB90 399 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 GDPD2Q9HCC8 539 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 TFIP11Q9UBB9 837 aaKnown RBP12.83□□□□□ -0.36
LSG1-207ENST00000475763 PNMA2Q9UL42 364 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.36
LSG1-207ENST00000475763 AFG3L2Q9Y4W6 797 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 SNCAIPQ9Y6H5 919 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 ZHX2Q9Y6X8 837 aa12.83□□□□□ -0.36
LSG1-207ENST00000475763 PTPRFP10586 1907 aa12.82□□□□□ -0.36
LSG1-207ENST00000475763 SMCO2A6NFE2 343 aa12.82□□□□□ -0.36
LSG1-207ENST00000475763 BMP15O95972 392 aa12.82□□□□□ -0.36
LSG1-207ENST00000475763 CD46P15529 392 aa12.82□□□□□ -0.36
LSG1-207ENST00000475763 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
LSG1-207ENST00000475763 FKBP1BP68106 108 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms