RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 F8W031 263 aaPredicted RBP7.48□□□□□ -1.21
LTN1-204ENST00000475344 MAPKAPK2P49137 400 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 CORO7P57737 925 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 ARID5AQ03989 594 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 SCRN1Q12765 414 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 SV2CQ496J9 727 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 PAQR3Q6TCH7 311 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 CABP7Q86V35 215 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 FAM178BQ8IXR5 827 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 ZNF513Q8N8E2 541 aaPredicted RBP7.48□□□□□ -1.21
LTN1-204ENST00000475344 USP33Q8TEY7 942 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 GPRC5CQ9NQ84 441 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 GULP1Q9UBP9 304 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 EMC9Q9Y3B6 208 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 BUB1BO60566 1050 aaPredicted RBP7.47□□□□□ -1.21
LTN1-204ENST00000475344 CYBBP04839 570 aa7.47□□□□□ -1.21
LTN1-204ENST00000475344 TCERG1LQ5VWI1 586 aa7.47□□□□□ -1.21
LTN1-204ENST00000475344 LZTR1Q8N653 840 aa7.47□□□□□ -1.21
LTN1-204ENST00000475344 TINF2Q9BSI4 451 aa7.47□□□□□ -1.21
LTN1-204ENST00000475344 ZNF408Q9H9D4 720 aa7.47□□□□□ -1.21
LTN1-204ENST00000475344 ZNF143P52747 638 aaPredicted RBP7.46□□□□□ -1.22
LTN1-204ENST00000475344 CBX2Q14781 532 aaPredicted RBP7.46□□□□□ -1.22
LTN1-204ENST00000475344 GTF2IRD2BQ6EKJ0 949 aa7.46□□□□□ -1.22
LTN1-204ENST00000475344 GTF2IRD2Q86UP8 949 aa7.46□□□□□ -1.22
LTN1-204ENST00000475344 AMIGO3Q86WK7 504 aa7.46□□□□□ -1.22
LTN1-204ENST00000475344 IGDCC3Q8IVU1 814 aa7.46□□□□□ -1.22
LTN1-204ENST00000475344 BTG4Q9NY30 223 aa7.46□□□□□ -1.22
LTN1-204ENST00000475344 PRKAG3Q9UGI9 489 aa7.46□□□□□ -1.22
LTN1-204ENST00000475344 R3HCC1Q9Y3T6 440 aaKnown RBP7.46□□□□□ -1.22
LTN1-204ENST00000475344 SRGAP3O43295 1099 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 PLS3P13797 630 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 BMP7P18075 431 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 AFF3P51826 1226 aaKnown RBP7.45□□□□□ -1.22
LTN1-204ENST00000475344 PRR5P85299 388 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 FXNQ16595 210 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 VMACQ2NL98 169 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 CNKSR3Q6P9H4 555 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 TRIM59Q8IWR1 403 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 TMEFF1Q8IYR6 380 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 NLGN2Q8NFZ4 835 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 MICAL1Q8TDZ2 1067 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 PODXL2Q9NZ53 605 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 PCDHA5Q9Y5H7 936 aa7.45□□□□□ -1.22
LTN1-204ENST00000475344 ADAMTS20P59510 1910 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 TRBV23OR9-2A0A075B6M9 112 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 SUSD5O60279 629 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 NPHS1O60500 1241 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 THBDP07204 575 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 INHBBP09529 407 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 FGRP09769 529 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 LIMS1P48059 325 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 MCF2L2Q86YR7 1114 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 TMEM151BQ8IW70 566 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 BTN2A2Q8WVV5 523 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 BCAS3Q9H6U6 928 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 EPB41L4AQ9HCS5 686 aaPredicted RBP7.44□□□□□ -1.22
LTN1-204ENST00000475344 FBLN5Q9UBX5 448 aa7.44□□□□□ -1.22
LTN1-204ENST00000475344 C7orf72A4D263 438 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 IRS4O14654 1257 aaPredicted RBP7.43□□□□□ -1.22
LTN1-204ENST00000475344 TBX1O43435 398 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 PPP1R11O60927 126 aaPredicted RBP7.43□□□□□ -1.22
LTN1-204ENST00000475344 FUCA1P04066 466 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 GLI4P10075 376 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 PFKLP17858 780 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 ECI1P42126 302 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 FAM129CQ86XR2 697 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 HNRNPLLQ8WVV9 542 aaKnown RBP7.43□□□□□ -1.22
LTN1-204ENST00000475344 COPS5Q92905 334 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 PWWP2AQ96N64 755 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 NKX2-4Q9H2Z4 354 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 ST7Q9NRC1 585 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 MARCH2Q9P0N8 246 aa7.43□□□□□ -1.22
LTN1-204ENST00000475344 GJB6O95452 261 aa7.42□□□□□ -1.22
LTN1-204ENST00000475344 ITGAVP06756 1048 aa7.42□□□□□ -1.22
LTN1-204ENST00000475344 SNRPB2P08579 225 aaKnown RBP7.42□□□□□ -1.22
LTN1-204ENST00000475344 KCNJ6P48051 423 aa7.42□□□□□ -1.22
LTN1-204ENST00000475344 MBLAC2Q68D91 279 aa7.42□□□□□ -1.22
LTN1-204ENST00000475344 MRM1Q6IN84 353 aaKnown RBP7.42□□□□□ -1.22
LTN1-204ENST00000475344 ALG3Q92685 438 aa7.42□□□□□ -1.22
LTN1-204ENST00000475344 DACT3Q96B18 629 aaPredicted RBP7.42□□□□□ -1.22
LTN1-204ENST00000475344 MRGPRX3Q96LB0 322 aa7.42□□□□□ -1.22
LTN1-204ENST00000475344 ZCCHC4Q9H5U6 513 aa7.42□□□□□ -1.22
LTN1-204ENST00000475344 CYP26B1Q9NR63 512 aa7.42□□□□□ -1.22
LTN1-204ENST00000475344 NUDT5Q9UKK9 219 aa7.42□□□□□ -1.22
LTN1-204ENST00000475344 FAN1Q9Y2M0 1017 aa7.42□□□□□ -1.22
LTN1-204ENST00000475344 TARBP2Q15633 366 aaKnown RBP7.41□□□□□ -1.22
LTN1-204ENST00000475344 ZNF227Q86WZ6 799 aa7.41□□□□□ -1.22
LTN1-204ENST00000475344 MTA3Q9BTC8 594 aa7.41□□□□□ -1.22
LTN1-204ENST00000475344 E9PSI1 815 aa7.4□□□□□ -1.22
LTN1-204ENST00000475344 NTRK1P04629 796 aa7.4□□□□□ -1.22
LTN1-204ENST00000475344 INF2Q27J81 1249 aa7.4□□□□□ -1.22
LTN1-204ENST00000475344 WWC2Q6AWC2 1192 aa7.4□□□□□ -1.22
LTN1-204ENST00000475344 ANKS3Q6ZW76 656 aa7.4□□□□□ -1.22
LTN1-204ENST00000475344 TEX2Q8IWB9 1127 aa7.4□□□□□ -1.22
LTN1-204ENST00000475344 MMP19Q99542 508 aa7.4□□□□□ -1.22
LTN1-204ENST00000475344 SIT1Q9Y3P8 196 aa7.4□□□□□ -1.22
LTN1-204ENST00000475344 IRS2Q9Y4H2 1338 aa7.39□□□□□ -1.23
LTN1-204ENST00000475344 NCAM1P13591 858 aa7.39□□□□□ -1.23
LTN1-204ENST00000475344 MC3RP41968 323 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms