RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 EYA4O95677 639 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 NCALDP61601 193 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 PDCD2Q16342 344 aaPredicted RBP4.59□□□□□ -1.67
USP16-205ENST00000474835 PARP6Q2NL67 630 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 KSR2Q6VAB6 950 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 FAM43BQ6ZT52 329 aaPredicted RBP4.59□□□□□ -1.67
USP16-205ENST00000474835 LRRC43Q8N309 656 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 KLHL23Q8NBE8 558 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 SYN2Q92777 582 aaPredicted RBP4.59□□□□□ -1.67
USP16-205ENST00000474835 GSDMAQ96QA5 445 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 TRIM6Q9C030 488 aaPredicted RBP4.59□□□□□ -1.67
USP16-205ENST00000474835 IL1RAPL2Q9NP60 686 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 TRIM10Q9UDY6 481 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 ZNF335Q9H4Z2 1342 aaPredicted RBP4.59□□□□□ -1.67
USP16-205ENST00000474835 THSD7AQ9UPZ6 1657 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 POTEFA5A3E0 1075 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 GNAT3A8MTJ3 354 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 LGALS16A8MUM7 142 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 FMNL1O95466 1100 aaPredicted RBP4.59□□□□□ -1.67
USP16-205ENST00000474835 POTEIP0CG38 1075 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 POTEJP0CG39 1038 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 ACEP12821 1306 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 IDO1P14902 403 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 INPP5BP32019 993 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 LIG3P49916 1009 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 GNG11P61952 73 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 KRT31Q15323 416 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 POTEEQ6S8J3 1075 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 DNAJC14Q6Y2X3 702 aaPredicted RBP4.59□□□□□ -1.67
USP16-205ENST00000474835 TEX9Q8N6V9 391 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 ACRBPQ8NEB7 543 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 C7orf43Q8WVR3 580 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 DESI2Q9BSY9 194 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 TIPINQ9BVW5 301 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 PCDH11XQ9BZA7 1347 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 NEUROG2Q9H2A3 272 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 PLEKHA4Q9H4M7 779 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 PLAGL2Q9UPG8 496 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 NEU2Q9Y3R4 380 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 SLC4A7Q9Y6M7 1214 aa4.59□□□□□ -1.67
USP16-205ENST00000474835 NCKAP5LQ9HCH0 1330 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 TRIM64A6NGJ6 449 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 NEURL1BA8MQ27 555 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 ERLIN1O75477 346 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 MMP1P03956 469 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 GLI1P08151 1106 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 ACADSP16219 412 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 ATF7P17544 494 aaPredicted RBP4.59□□□□□ -1.68
USP16-205ENST00000474835 LIFRP42702 1097 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 SLC18A1P54219 525 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 POSTNQ15063 836 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 PROSER3Q2NL68 480 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 ZCWPW2Q504Y3 356 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 TCP11X2Q5H9J9 407 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 MEI1Q5TIA1 1274 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 NUGGCQ68CJ6 796 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 RELL1Q8IUW5 271 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 CNGA4Q8IV77 575 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 ARMC2Q8NEN0 867 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 SPATA4Q8NEY3 305 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 PGM2Q96G03 612 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 CHP1Q99653 195 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 PHF20Q9BVI0 1012 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 FAM129AQ9BZQ8 928 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 MTFR1LQ9H019 292 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 ISCUQ9H1K1 167 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 NOD2Q9HC29 1040 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 ADAM22Q9P0K1 906 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 RNF14Q9UBS8 474 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 NUMBLQ9Y6R0 609 aa4.59□□□□□ -1.68
USP16-205ENST00000474835 PDCD11Q14690 1871 aaKnown RBP4.59□□□□□ -1.68
USP16-205ENST00000474835 IRS2Q9Y4H2 1338 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 B4DLN1 442 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 ANKRD65E5RJM6 399 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 CSDE1O75534 798 aaKnown RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 NOL4O94818 638 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 CSF1RP07333 972 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 UBTFL1P0CB47 393 aaPredicted RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 ADAM9Q13443 819 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 SEC23AQ15436 765 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 DIXDC1Q155Q3 683 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 CCDC96Q2M329 555 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 AGMOQ6ZNB7 445 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 ADSSL1Q8N142 457 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 RETREG2Q8NC44 543 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 FAM76AQ8TAV0 307 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 PARD3BQ8TEW8 1205 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 N4BP2L2Q92802 583 aaPredicted RBP4.58□□□□□ -1.68
USP16-205ENST00000474835 FAM212AQ96EL1 285 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 PAGE5Q96GU1 130 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 ZDHHC7Q9NXF8 308 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 ANAPC4Q9UJX5 808 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 FBXO3Q9UK99 471 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 USP20Q9Y2K6 914 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 MGAMO43451 1857 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 ANK1P16157 1881 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 CFAP73A6NFT4 308 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 E7EVH7 732 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 GOLGA6L19H0YKK7 550 aa4.58□□□□□ -1.68
USP16-205ENST00000474835 ZNF862O60290 1169 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms