RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 ZNF536O15090 1300 aa23.25■■□□□ 1.31
CDHR3-210ENST00000474330 MYPNQ86TC9 1320 aa23.25■■□□□ 1.31
CDHR3-210ENST00000474330 GOLGA6L4A6NEF3 574 aa23.24■■□□□ 1.31
CDHR3-210ENST00000474330 ALDH1A1P00352 501 aa23.24■■□□□ 1.31
CDHR3-210ENST00000474330 ATP2B1P20020 1258 aa23.24■■□□□ 1.31
CDHR3-210ENST00000474330 DSG3P32926 999 aa23.24■■□□□ 1.31
CDHR3-210ENST00000474330 JAKMIP3Q5VZ66 844 aa23.24■■□□□ 1.31
CDHR3-210ENST00000474330 TMEM260Q9NX78 707 aa23.24■■□□□ 1.31
CDHR3-210ENST00000474330 ABCB11O95342 1321 aa23.24■■□□□ 1.31
CDHR3-210ENST00000474330 CCL15-CCL14A0A0B4J2E2 113 aa23.23■■□□□ 1.31
CDHR3-210ENST00000474330 ZBED4O75132 1171 aa23.23■■□□□ 1.31
CDHR3-210ENST00000474330 ME1P48163 572 aa23.23■■□□□ 1.31
CDHR3-210ENST00000474330 CCL15Q16663 113 aa23.23■■□□□ 1.31
CDHR3-210ENST00000474330 MCTP2Q6DN12 878 aa23.23■■□□□ 1.31
CDHR3-210ENST00000474330 GADL1Q6ZQY3 521 aa23.23■■□□□ 1.31
CDHR3-210ENST00000474330 PCDHA7Q9UN72 937 aa23.23■■□□□ 1.31
CDHR3-210ENST00000474330 MRPL11Q9Y3B7 192 aaKnown RBP23.23■■□□□ 1.31
CDHR3-210ENST00000474330 GPR25O00155 361 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 VWA5AO00534 786 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 WNT7AO00755 349 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 MEIS2O14770 477 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 OPLAHO14841 1288 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 BMP15O95972 392 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 UBE2SQ16763 222 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 INF2Q27J81 1249 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 ADALQ6DHV7 355 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 FASTKD5Q7L8L6 764 aaKnown RBP23.22■■□□□ 1.31
CDHR3-210ENST00000474330 ZNF296Q8WUU4 475 aaPredicted RBP23.22■■□□□ 1.31
CDHR3-210ENST00000474330 ATG4CQ96DT6 458 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 HOXC10Q9NYD6 342 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 COL11A1P12107 1806 aaPredicted RBP23.22■■□□□ 1.31
CDHR3-210ENST00000474330 HOXA7P31268 230 aaPredicted RBP23.22■■□□□ 1.31
CDHR3-210ENST00000474330 FAM43AQ8N2R8 423 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 ANP32EQ9BTT0 268 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 CCPG1Q9ULG6 757 aa23.22■■□□□ 1.31
CDHR3-210ENST00000474330 PIK3CDO00329 1044 aa23.21■■□□□ 1.31
CDHR3-210ENST00000474330 TAL1P17542 331 aaPredicted RBP23.21■■□□□ 1.31
CDHR3-210ENST00000474330 AP3B2Q13367 1082 aa23.21■■□□□ 1.31
CDHR3-210ENST00000474330 ZNF174Q15697 407 aa23.21■■□□□ 1.31
CDHR3-210ENST00000474330 TREML2Q5T2D2 321 aa23.21■■□□□ 1.31
CDHR3-210ENST00000474330 USP17L6PQ6QN14 398 aa23.21■■□□□ 1.31
CDHR3-210ENST00000474330 TBCKQ8TEA7 893 aa23.21■■□□□ 1.31
CDHR3-210ENST00000474330 AGBL1Q96MI9 1066 aa23.21■■□□□ 1.31
CDHR3-210ENST00000474330 CTDP1Q9Y5B0 961 aaPredicted RBP23.21■■□□□ 1.31
CDHR3-210ENST00000474330 CETPP11597 493 aa23.2■■□□□ 1.3
CDHR3-210ENST00000474330 MARCKSP29966 332 aaPredicted RBP23.2■■□□□ 1.3
CDHR3-210ENST00000474330 OAZ1P54368 228 aa23.2■■□□□ 1.3
CDHR3-210ENST00000474330 CRHR2Q13324 411 aa23.2■■□□□ 1.3
CDHR3-210ENST00000474330 MOGSQ13724 837 aa23.2■■□□□ 1.3
CDHR3-210ENST00000474330 NEK8Q86SG6 692 aa23.2■■□□□ 1.3
CDHR3-210ENST00000474330 REPS2Q8NFH8 660 aa23.2■■□□□ 1.3
CDHR3-210ENST00000474330 RAVER2Q9HCJ3 691 aaKnown RBP23.2■■□□□ 1.3
CDHR3-210ENST00000474330 AGTPBP1Q9UPW5 1226 aa23.2■■□□□ 1.3
CDHR3-210ENST00000474330 A0A1W2PQ27 194 aa23.19■■□□□ 1.3
CDHR3-210ENST00000474330 A0A1W2PQ64 194 aa23.19■■□□□ 1.3
CDHR3-210ENST00000474330 A0A1W2PQD8 194 aa23.19■■□□□ 1.3
CDHR3-210ENST00000474330 AXDND1Q5T1B0 1012 aaPredicted RBP23.19■■□□□ 1.3
CDHR3-210ENST00000474330 CPXCR1Q8N123 301 aa23.19■■□□□ 1.3
CDHR3-210ENST00000474330 SPDYE16A6NNV3 312 aaPredicted RBP23.19■■□□□ 1.3
CDHR3-210ENST00000474330 BTBD19C9JJ37 291 aa23.19■■□□□ 1.3
CDHR3-210ENST00000474330 FOSP01100 380 aaPredicted RBP23.19■■□□□ 1.3
CDHR3-210ENST00000474330 TPRNQ4KMQ1 711 aa23.19■■□□□ 1.3
CDHR3-210ENST00000474330 MYH7BA7E2Y1 1941 aa23.18■■□□□ 1.3
CDHR3-210ENST00000474330 ATP2A1O14983 1001 aa23.18■■□□□ 1.3
CDHR3-210ENST00000474330 PTPREP23469 700 aa23.18■■□□□ 1.3
CDHR3-210ENST00000474330 ATP2C1P98194 919 aaPredicted RBP23.18■■□□□ 1.3
CDHR3-210ENST00000474330 PABPC4Q13310 644 aaKnown RBP eCLIP23.18■■□□□ 1.3
CDHR3-210ENST00000474330 ORC2Q13416 577 aaPredicted RBP23.18■■□□□ 1.3
CDHR3-210ENST00000474330 A0A0G2JMZ2 1700 aa23.17■■□□□ 1.3
CDHR3-210ENST00000474330 HTTP42858 3142 aa23.17■■□□□ 1.3
CDHR3-210ENST00000474330 CUTAO60888 179 aa23.17■■□□□ 1.3
CDHR3-210ENST00000474330 MCM7P33993 719 aa23.17■■□□□ 1.3
CDHR3-210ENST00000474330 PTGDRQ13258 359 aa23.17■■□□□ 1.3
CDHR3-210ENST00000474330 KRI1Q8N9T8 703 aaKnown RBP23.17■■□□□ 1.3
CDHR3-210ENST00000474330 ANO3Q9BYT9 981 aa23.17■■□□□ 1.3
CDHR3-210ENST00000474330 MCOLN1Q9GZU1 580 aa23.17■■□□□ 1.3
CDHR3-210ENST00000474330 FBXO2Q9UK22 296 aaPredicted RBP23.17■■□□□ 1.3
CDHR3-210ENST00000474330 SRPRBQ9Y5M8 271 aaKnown RBP23.17■■□□□ 1.3
CDHR3-210ENST00000474330 CENPFP49454 3210 aa23.17■■□□□ 1.3
CDHR3-210ENST00000474330 GHRHRQ02643 423 aa23.16■■□□□ 1.3
CDHR3-210ENST00000474330 LETM2Q2VYF4 491 aa23.16■■□□□ 1.3
CDHR3-210ENST00000474330 CAVIN1Q6NZI2 390 aaKnown RBP23.16■■□□□ 1.3
CDHR3-210ENST00000474330 CCAR1Q8IX12 1150 aaKnown RBP23.16■■□□□ 1.3
CDHR3-210ENST00000474330 SAMD3Q8N6K7 520 aa23.16■■□□□ 1.3
CDHR3-210ENST00000474330 C4orf32Q8N8J7 132 aa23.16■■□□□ 1.3
CDHR3-210ENST00000474330 CLEC4DQ8WXI8 215 aa23.16■■□□□ 1.3
CDHR3-210ENST00000474330 P2RX7Q99572 595 aaKnown RBP23.16■■□□□ 1.3
CDHR3-210ENST00000474330 ZNF214Q9UL59 606 aaPredicted RBP23.16■■□□□ 1.3
CDHR3-210ENST00000474330 SPDYE3A6NKU9 549 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 GCOM1H8Y6P7 765 aaPredicted RBP23.15■■□□□ 1.3
CDHR3-210ENST00000474330 EDIL3O43854 480 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 CFBP00751 764 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 POLR2MP0CAP2 368 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 ALAS1P13196 640 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 LIG1P18858 919 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 CMA1P23946 247 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 IRX3P78415 501 aaPredicted RBP23.15■■□□□ 1.3
CDHR3-210ENST00000474330 GPAT2Q6NUI2 795 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 MCF2L2Q86YR7 1114 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 TBC1D5Q92609 795 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms