RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 K7ESM1 405 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 SUSD5O60279 629 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 ZNF205O95201 554 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 GJB6O95452 261 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 SYPP08247 313 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 SDHBP21912 280 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 CDR1P51861 262 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 SNW1Q13573 536 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 NFE2L2Q16236 605 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 FAM129CQ86XR2 697 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 ARHGEF39Q8N4T4 335 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 BVESQ8NE79 360 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 SGSM3Q96HU1 749 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 FCRL2Q96LA5 508 aaPredicted RBP5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 CCDC113Q9H0I3 377 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 SRRDQ9UH36 339 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 PCDHB10Q9UN67 800 aa5.05□□□□□ -1.6
ECHDC1-213ENST00000474240 NOTOA8MTQ0 251 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 KIR2DL1P43626 348 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 KIR2DL2P43627 348 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 AMPD2Q01433 879 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 TEKQ02763 1124 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 RASGRF1Q13972 1273 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 ZNF827Q17R98 1081 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 EEF1DP3Q658K8 133 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 NLRX1Q86UT6 975 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 LRRC47Q8N1G4 583 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 USHBP1Q8N6Y0 703 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 LINC01356Q8N9X3 169 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 TP53I13Q8NBR0 393 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 CCDC140Q96MF4 163 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 NOL6Q9H6R4 1146 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 FAM86C1Q9NVL1 165 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 LRP2BPQ9P2M1 347 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 CGGBP1Q9UFW8 167 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 SUSD2Q9UGT4 822 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 MSRB2Q9Y3D2 182 aa5.04□□□□□ -1.6
ECHDC1-213ENST00000474240 HRKO00198 91 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 USP2O75604 605 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 VAV1P15498 845 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 IFRD2Q12894 506 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 SERINC3Q13530 473 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 SV2CQ496J9 727 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 RCSD1Q6JBY9 416 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 CRTC3Q6UUV7 619 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 SLC16A11Q8NCK7 471 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 MZB1Q8WU39 189 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 FOXP3Q9BZS1 431 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 TNFRSF10DQ9UBN6 386 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 AKT3Q9Y243 479 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 ZNF281Q9Y2X9 895 aa5.03□□□□□ -1.6
ECHDC1-213ENST00000474240 H0Y8X5 98 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 MATN3O15232 486 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 PDPK1O15530 556 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 RPL10P27635 214 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 CTSKP43235 329 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 SLC10A6Q3KNW5 377 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 ZC3H12BQ5HYM0 836 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 WAPLQ7Z5K2 1190 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 TRIM59Q8IWR1 403 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 CELF2-AS1Q8N7Q2 184 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 NAT16Q8N8M0 369 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 BRF1Q92994 677 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 PPP1R14AQ96A00 147 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 FGD4Q96M96 766 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 ZDHHC15Q96MV8 337 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 PWWP2AQ96N64 755 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 OSBPL2Q9H1P3 480 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 ZMYM5Q9UJ78 669 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 EMC9Q9Y3B6 208 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 BACE2Q9Y5Z0 518 aa5.02□□□□□ -1.61
ECHDC1-213ENST00000474240 MEIS1O00470 390 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 TBC1D8O95759 1140 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 CPP00450 1065 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 FSHBP01225 129 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 CD3EP07766 207 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 HSP90AA2PQ14568 343 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 LONRF2Q1L5Z9 754 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 MTERF2Q49AM1 385 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 HLA-DQA1Q5Y7H0 255 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 DPH6Q7L8W6 267 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 IGDCC3Q8IVU1 814 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 ADCY4Q8NFM4 1077 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 LINC01599Q8WXQ3 324 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 MAP6Q96JE9 813 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 G6PC3Q9BUM1 346 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 CDADC1Q9BWV3 514 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 SLC12A9Q9BXP2 914 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 ST7Q9NRC1 585 aa5.01□□□□□ -1.61
ECHDC1-213ENST00000474240 A0A1W2PQ45 241 aaPredicted RBP5□□□□□ -1.61
ECHDC1-213ENST00000474240 A0A1W2PQY0 241 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 WTIPA6NIX2 430 aaPredicted RBP5□□□□□ -1.61
ECHDC1-213ENST00000474240 B2RBV5 119 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 AURKAO14965 403 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 GSTM1P09488 218 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 HOXC12P31275 282 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 SEPHS1P49903 392 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 CORO7P57737 925 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 PPP2R5DQ14738 602 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 UBXN11Q5T124 520 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms