RNA–Protein interactions for RNA: ENST00000473883.5

HCLS1-205, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 2

Gene HCLS1, Length 2,710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-205	ENST00000473883	FANCG	O15287	622 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	MAP3K7	O43318	606 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	HNRNPR	O43390	633 aa	Known RBP	13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	LCA5L	O95447	670 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	GHR	P10912	638 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	CD9	P21926	228 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	SP100	P23497	879 aa	Predicted RBP	13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	CUL4A	Q13619	759 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	TAOK1	Q7L7X3	1001 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	TRIML2	Q8N7C3	387 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	STKLD1	Q8NE28	680 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	SNF8	Q96H20	258 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	RPS6KC1	Q96S38	1066 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	PNKP	Q96T60	521 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	SETDB2	Q96T68	719 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	NSRP1	Q9H0G5	558 aa	Known RBP	13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	CARD9	Q9H257	536 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	CNNM2	Q9H8M5	875 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	SUGCT	Q9HAC7	445 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	HEY1	Q9Y5J3	304 aa		13.92	□□□□□ -0.18
HCLS1-205	ENST00000473883	GAK	O14976	1311 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883		M0QX08	132 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	OPLAH	O14841	1288 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	GSTT1	P30711	240 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	MAN1A1	P33908	653 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	RARS	P54136	660 aa	Known RBP	13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	CHMP4BP1	P59074	171 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	BBS9	Q3SYG4	887 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	TMTC4	Q5T4D3	741 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	DEPDC1	Q5TB30	811 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	ALS2CL	Q60I27	953 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	CAPN12	Q6ZSI9	719 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	PDCD7	Q8N8D1	485 aa	Known RBP	13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	SIKE1	Q9BRV8	207 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	NAA15	Q9BXJ9	866 aa	Known RBP	13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	EPN3	Q9H201	632 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	NDFIP2	Q9NV92	336 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	STIM2	Q9P246	746 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	HPCAL4	Q9UM19	191 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	CHMP2B	Q9UQN3	213 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	LZTS1	Q9Y250	596 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	ARHGEF40	Q8TER5	1519 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	ACADVL	P49748	655 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	PAK2	Q13177	524 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	LSAMP	Q13449	338 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	PDCD4	Q53EL6	469 aa	Known RBP	13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	EURL	Q9NYK6	297 aa		13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.91	□□□□□ -0.18
HCLS1-205	ENST00000473883	HECW1	Q76N89	1606 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	MYC	P01106	439 aa	Predicted RBP	13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	TSPAN7	P41732	249 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	AKAP17A	Q02040	695 aa	Known RBP	13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	ANO6	Q4KMQ2	910 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	OR52E8	Q6IFG1	317 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	WDR93	Q6P2C0	686 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	ZNF473	Q8WTR7	871 aa	Known RBP	13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	HAPLN3	Q96S86	360 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	NDEL1	Q9GZM8	345 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	RIMS1	Q86UR5	1692 aa	Known RBP	13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	RICTOR	Q6R327	1708 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	KDM5D	Q9BY66	1539 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	ITIH6	Q6UXX5	1313 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	SPECC1L-ADORA2A	F8WAN1	911 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	DNM1L	O00429	736 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	SCTR	P47872	440 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	TUB	P50607	506 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	IK	Q13123	557 aa	Predicted RBP	13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	LAPTM5	Q13571	262 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	TUBB2A	Q13885	445 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	SLC27A3	Q5K4L6	730 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	ANKRD20A2	Q5SQ80	823 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	ANKRD20A1	Q5TYW2	823 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	SYDE2	Q5VT97	1194 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	ANKRD20A3	Q5VUR7	823 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	MAML1	Q92585	1016 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	PTPRN2	Q92932	1015 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	TUBB2B	Q9BVA1	445 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	DNAI2	Q9GZS0	605 aa		13.9	□□□□□ -0.18
HCLS1-205	ENST00000473883	PCF11	O94913	1555 aa	Known RBP	13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	TTC37	Q6PGP7	1564 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	BAG3	O95817	575 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	RBP3	P10745	1247 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	PRKACB	P22694	351 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	CES1	P23141	567 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	POLD2	P49005	469 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	HDGF	P51858	240 aa	Known RBP	13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	UBXN2A	P68543	259 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	SPCS2	Q15005	226 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	ALKBH2	Q6NS38	261 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	KLC3	Q6P597	504 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	ZNF598	Q86UK7	904 aa	Known RBP	13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	L3MBTL2	Q969R5	705 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	TUBGCP5	Q96RT8	1024 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	LMTK2	Q8IWU2	1503 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	GOLGA8K	D6RF30	607 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	APOE	P02649	317 aa		13.89	□□□□□ -0.19
HCLS1-205	ENST00000473883	TCF3	P15923	654 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms