RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 SYTL5Q8TDW5 730 aaPredicted RBP16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 TRIM17Q9Y577 477 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 DDX49Q9Y6V7 483 aaKnown RBP16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 IVNS1ABPQ9Y6Y0 642 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 ASTN1O14525 1302 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 SOWAHBA6NEL2 793 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 SMCO2A6NFE2 343 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 STRNO43815 780 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 CALML3P27482 149 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 FLT3LGP49771 235 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 MAP2K5Q13163 448 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 KCTD2Q14681 263 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 ZNF792Q3KQV3 632 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 PPP1R18Q6NYC8 613 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 ABRAQ8N0Z2 381 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 TAAR1Q96RJ0 339 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 NUDT12Q9BQG2 462 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 TMEM260Q9NX78 707 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 SRRDQ9UH36 339 aa16.86■□□□□ 0.29
SMARCD3-207ENST00000472103 ESYT2A0FGR8 921 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 GUCY1B3Q02153 619 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 TRAF1Q13077 416 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 CCL14Q16627 93 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 FAM133AQ8N9E0 248 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 RGS22Q8NE09 1264 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 RASGRP4Q8TDF6 673 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 PGBD1Q96JS3 809 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 PHF20Q9BVI0 1012 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 ZMYND12Q9H0C1 365 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 PSTPIP2Q9H939 334 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 RIC8AQ9NPQ8 531 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 SH3GLB2Q9NR46 395 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 FLRT1Q9NZU1 646 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 SMC3Q9UQE7 1217 aa16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.85■□□□□ 0.29
SMARCD3-207ENST00000472103 POTEB2H3BUK9 544 aa16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 GCOM1H8Y6P7 765 aaPredicted RBP16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 POLR2MP0CAP2 368 aa16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 ADCY7P51828 1080 aa16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 NLRP5P59047 1200 aa16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 KRT40Q6A162 431 aa16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 FAM184AQ8NB25 1140 aa16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 OXER1Q8TDS5 423 aa16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 SOCS4Q8WXH5 440 aa16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 INTS4Q96HW7 963 aaKnown RBP16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 PFASO15067 1338 aa16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 MCM3APO60318 1980 aa16.84■□□□□ 0.29
SMARCD3-207ENST00000472103 CLK2P49760 499 aaKnown RBP16.83■□□□□ 0.28
SMARCD3-207ENST00000472103 DPP9Q86TI2 863 aa16.83■□□□□ 0.28
SMARCD3-207ENST00000472103 FCHSD1Q86WN1 690 aa16.83■□□□□ 0.28
SMARCD3-207ENST00000472103 WASF1Q92558 559 aa16.83■□□□□ 0.28
SMARCD3-207ENST00000472103 BIN2Q9UBW5 565 aaPredicted RBP16.83■□□□□ 0.28
SMARCD3-207ENST00000472103 PTCH2Q9Y6C5 1203 aa16.83■□□□□ 0.28
SMARCD3-207ENST00000472103 M0R2N6 131 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 PIK3CDO00329 1044 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 IGHA2P01877 340 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 HOXC6P09630 235 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 HOXD10P28358 340 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 RGS2P41220 211 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 UBXN2AP68543 259 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 JAKMIP3Q5VZ66 844 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 CTU1Q7Z7A3 348 aaKnown RBP16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 CCDC148Q8NFR7 591 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 TRIB2Q92519 343 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 CUL5Q93034 780 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 MAML3Q96JK9 1138 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 C8orf76Q96K31 380 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 APBA2Q99767 749 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 C6orf50Q9HD87 102 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 PRDM10Q9NQV6 1147 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 LRRC37A2A6NM11 1700 aa16.82■□□□□ 0.28
SMARCD3-207ENST00000472103 GNRH1P01148 92 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 ALDH5A1P51649 535 aaPredicted RBP16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 TRIM32Q13049 653 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 IRF5Q13568 498 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 EARS2Q5JPH6 523 aaKnown RBP16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 BLIDQ8IZY5 108 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 SAMD3Q8N6K7 520 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 DAGLBQ8NCG7 672 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 IL31RAQ8NI17 732 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 CCDC12Q8WUD4 166 aaPredicted RBP16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 PCDHA6Q9UN73 950 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 PCDHA4Q9UN74 947 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 PTPN22Q9Y2R2 807 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 PCDHA8Q9Y5H6 950 aa16.81■□□□□ 0.28
SMARCD3-207ENST00000472103 RPTORQ8N122 1335 aa16.8■□□□□ 0.28
SMARCD3-207ENST00000472103 EDIL3O43854 480 aa16.8■□□□□ 0.28
SMARCD3-207ENST00000472103 MMP1P03956 469 aa16.8■□□□□ 0.28
SMARCD3-207ENST00000472103 ELNP15502 786 aa16.8■□□□□ 0.28
SMARCD3-207ENST00000472103 EIF2AK2P19525 551 aaKnown RBP16.8■□□□□ 0.28
SMARCD3-207ENST00000472103 MRPL12P52815 198 aaKnown RBP16.8■□□□□ 0.28
SMARCD3-207ENST00000472103 NR5A1Q13285 461 aa16.8■□□□□ 0.28
SMARCD3-207ENST00000472103 ARHGEF6Q15052 776 aa16.8■□□□□ 0.28
SMARCD3-207ENST00000472103 FBXO18Q8NFZ0 1043 aa16.8■□□□□ 0.28
SMARCD3-207ENST00000472103 TNFRSF25Q93038 417 aa16.8■□□□□ 0.28
SMARCD3-207ENST00000472103 ZFP91Q96JP5 570 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms