RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CAB39Q9Y376 341 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 SNX5Q9Y5X3 404 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 CREB3O43889 395 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 KDM1AO60341 852 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 UFL1O94874 794 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 KRT4P19013 534 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 SLC9A1P19634 815 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 IL15P40933 162 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 TBL3Q12788 808 aaKnown RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 CHRNA2Q15822 529 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 CCDC92Q53HC0 331 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 ZNF654Q8IZM8 581 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 ABI1Q8IZP0 508 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 CCDC197Q8NCU1 140 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 OR9Q1Q8NGQ5 310 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 ENOX1Q8TC92 643 aaKnown RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 SYNDIG1Q9H7V2 258 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 LZTS1Q9Y250 596 aa7.49□□□□□ -1.21
BRCA1-210ENST00000471181 V9GY48 417 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 NKTRP30414 1462 aaKnown RBP7.49□□□□□ -1.21
BRCA1-210ENST00000471181 WDR91A4D1P6 747 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 B4E1Z4 1266 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 K7ENM7 598 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 NBPF20Q3BBV1 942 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 NBPF10Q6P3W6 841 aaKnown RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 DZIP3Q86Y13 1208 aaKnown RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 TRMT44Q8IYL2 757 aaKnown RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 ING2Q9H160 280 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 SLC38A10Q9HBR0 1119 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 RTEL1Q9NZ71 1219 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 ANKRD50Q9ULJ7 1429 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 IQANK1A0A1B0GTG1 560 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 UBXN8O00124 270 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 GRIN1Q05586 938 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 GABPB1Q06547 395 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 CEP78Q5JTW2 689 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 KCTD16Q68DU8 428 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 NLRX1Q86UT6 975 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 KCTD17Q8N5Z5 321 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 BCAS4Q8TDM0 211 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 TSC1Q92574 1164 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 MAML1Q92585 1016 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 ADPGKQ9BRR6 497 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 SAR1BQ9Y6B6 198 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 MOCS3O95396 460 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 DYNLT1P63172 113 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 TCP10Q12799 353 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 TFCP2Q12800 502 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 IFT88Q13099 833 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 LVRNQ6Q4G3 990 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 TRIM42Q8IWZ5 723 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 UPF3AQ9H1J1 476 aaKnown RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 TRIM45Q9H8W5 580 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 ARMT1Q9H993 441 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 ZNF229Q9UJW7 825 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 SLC8A2Q9UPR5 921 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 PASKQ96RG2 1323 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 FOXO3O43524 673 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 DEXIO95424 95 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 TMEM191BP0C7N4 346 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 STAT1P42224 750 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 MSH2P43246 934 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 CCT5P48643 541 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 LBRQ14739 615 aaKnown RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 C1orf228Q6PIY5 440 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 C6orf203Q9P0P8 240 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 SUPT3HB4E1H0 165 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 KPNA2P52292 529 aaKnown RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 TCP11X2Q5H9J9 407 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 ANO1Q5XXA6 986 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 ARMC2Q8NEN0 867 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 SLC26A7Q8TE54 656 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 STAMQ92783 540 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 SRPK1Q96SB4 655 aaKnown RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 SUGCTQ9HAC7 445 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 DMAP1Q9NPF5 467 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 INTS9Q9NV88 658 aaKnown RBP7.48□□□□□ -1.21
BRCA1-210ENST00000471181 SLC5A4Q9NY91 659 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 STMN3Q9NZ72 180 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 PRKAG2Q9UGJ0 569 aa7.48□□□□□ -1.21
BRCA1-210ENST00000471181 FAM83GA6ND36 823 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 DAB1O75553 588 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 SLFN14P0C7P3 912 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 HSPD1P10809 573 aaKnown RBP7.47□□□□□ -1.21
BRCA1-210ENST00000471181 PYGBP11216 843 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 ZNF18P17022 549 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 PMLP29590 882 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 CAPZA2P47755 286 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 NLRP12P59046 1061 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 HS1BP3Q53T59 392 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 TPTE2Q6XPS3 522 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 ARHGEF18Q6ZSZ5 1173 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 METTL23Q86XA0 190 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 TTLL11Q8NHH1 800 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 SERPINI1Q99574 410 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 YIPF2Q9BWQ6 316 aa7.47□□□□□ -1.21
BRCA1-210ENST00000471181 TSR3Q9UJK0 312 aaKnown RBP7.47□□□□□ -1.21
BRCA1-210ENST00000471181 L3MBTL1Q9Y468 752 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms