RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TSPY2A6NKD2 308 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 TNFRSF10AO00220 468 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 DYNC1LI2O43237 492 aaPredicted RBP10.67□□□□□ -0.7
SF3A1-206ENST00000471037 B4GALT4O60513 344 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 ICAM1P05362 532 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 ADGRE1Q14246 886 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 C8orf34Q49A92 452 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 DUSP28Q4G0W2 176 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 MUM1L1Q5H9M0 696 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 RASGRP2Q7LDG7 609 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 FBXO16Q8IX29 292 aaPredicted RBP10.67□□□□□ -0.7
SF3A1-206ENST00000471037 WNT8AQ9H1J5 351 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 RANBP17Q9H2T7 1088 aaKnown RBP10.67□□□□□ -0.7
SF3A1-206ENST00000471037 PDGFCQ9NRA1 345 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 THEGQ9P2T0 379 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 ANAPC4Q9UJX5 808 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 CCPG1Q9ULG6 757 aa10.67□□□□□ -0.7
SF3A1-206ENST00000471037 YBX2Q9Y2T7 364 aaKnown RBP10.67□□□□□ -0.7
SF3A1-206ENST00000471037 CHD9Q3L8U1 2897 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 ORC4O43929 436 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 NMT2O60551 498 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 FGRP09769 529 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 PTGS1P23219 599 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 CHMLP26374 656 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 HOXD11P31277 338 aaPredicted RBP10.66□□□□□ -0.7
SF3A1-206ENST00000471037 TMEM63BQ5T3F8 832 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 BTNL9Q6UXG8 535 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 NSMFQ6X4W1 530 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 EEPD1Q7L9B9 569 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 OTOP2Q7RTS6 562 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 RPUSD2Q8IZ73 545 aaKnown RBP10.66□□□□□ -0.7
SF3A1-206ENST00000471037 DCAF4Q8WV16 495 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 RUFY2Q8WXA3 655 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 VWCEQ96DN2 955 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 ASB2Q96Q27 587 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 TRPV6Q9H1D0 765 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 ALDH8A1Q9H2A2 487 aaPredicted RBP10.66□□□□□ -0.7
SF3A1-206ENST00000471037 NKX2-4Q9H2Z4 354 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 SLC28A3Q9HAS3 691 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 DIAPH3Q9NSV4 1193 aa10.66□□□□□ -0.7
SF3A1-206ENST00000471037 ADD3Q9UEY8 706 aaKnown RBP10.66□□□□□ -0.7
SF3A1-206ENST00000471037 DDX49Q9Y6V7 483 aaKnown RBP10.66□□□□□ -0.7
SF3A1-206ENST00000471037 RBM47A0AV96 593 aaKnown RBP10.65□□□□□ -0.7
SF3A1-206ENST00000471037 PFKMP08237 780 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 SUPT20HL2P0C7V6 817 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 ALDH5A1P51649 535 aaPredicted RBP10.65□□□□□ -0.7
SF3A1-206ENST00000471037 CCL23P55773 120 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 SNAP25P60880 206 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 PSMC6P62333 389 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 PURAQ00577 322 aaKnown RBP10.65□□□□□ -0.7
SF3A1-206ENST00000471037 CTDSPL2Q05D32 466 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 KIAA1211Q6ZU35 1233 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 PPM1EQ8WY54 764 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 BACH2Q9BYV9 841 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 POLR3EQ9NVU0 708 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 PCDHA11Q9Y5I1 949 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 SLC4A7Q9Y6M7 1214 aa10.65□□□□□ -0.7
SF3A1-206ENST00000471037 RAD50Q92878 1312 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 GBF1Q92538 1859 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 NFIBO00712 420 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 RANBP6O60518 1105 aaKnown RBP10.64□□□□□ -0.71
SF3A1-206ENST00000471037 CPT1AP50416 773 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 MRPS5P82675 430 aaKnown RBP10.64□□□□□ -0.71
SF3A1-206ENST00000471037 BAATQ14032 418 aaPredicted RBP10.64□□□□□ -0.71
SF3A1-206ENST00000471037 ALX1Q15699 326 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 CCDC96Q2M329 555 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 VPS53Q5VIR6 699 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 SYDE2Q5VT97 1194 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 PPP2R2DQ66LE6 453 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 CHMP4CQ96CF2 233 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 SCLYQ96I15 445 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
SF3A1-206ENST00000471037 WDR11Q9BZH6 1224 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 INCENPQ9NQS7 918 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 TCP11L1Q9NUJ3 509 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 PNMA2Q9UL42 364 aa10.64□□□□□ -0.71
SF3A1-206ENST00000471037 TNKSO95271 1327 aa10.63□□□□□ -0.71
SF3A1-206ENST00000471037 ZMYM6O95789 1325 aa10.63□□□□□ -0.71
SF3A1-206ENST00000471037 WDR19Q8NEZ3 1342 aa10.63□□□□□ -0.71
SF3A1-206ENST00000471037 NKRFO15226 690 aaKnown RBP eCLIP10.63□□□□□ -0.71
SF3A1-206ENST00000471037 TOP1P11387 765 aaKnown RBP10.63□□□□□ -0.71
SF3A1-206ENST00000471037 ATP2A2P16615 1042 aaKnown RBP10.63□□□□□ -0.71
SF3A1-206ENST00000471037 IGFBP4P22692 258 aa10.63□□□□□ -0.71
SF3A1-206ENST00000471037 EDNRBP24530 442 aa10.63□□□□□ -0.71
SF3A1-206ENST00000471037 TTBK2Q6IQ55 1244 aa10.63□□□□□ -0.71
SF3A1-206ENST00000471037 ADAMTS19Q8TE59 1207 aa10.63□□□□□ -0.71
SF3A1-206ENST00000471037 TMEM47Q9BQJ4 181 aa10.63□□□□□ -0.71
SF3A1-206ENST00000471037 ESYT1Q9BSJ8 1104 aa10.63□□□□□ -0.71
SF3A1-206ENST00000471037 HELLSQ9NRZ9 838 aa10.63□□□□□ -0.71
SF3A1-206ENST00000471037 TRMT13Q9NUP7 481 aaKnown RBP10.63□□□□□ -0.71
SF3A1-206ENST00000471037 PTPDC1A2A3K4 754 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 A6NJR5 290 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 ZBBXA8MT70 800 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 SGSM2O43147 1006 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 REC8O95072 547 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 PDHBP11177 359 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 CYP2C9P11712 490 aa10.62□□□□□ -0.71
SF3A1-206ENST00000471037 POU3F3P20264 500 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms