RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 SNHG28P0DPA3 235 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 DNAJB2P25686 324 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 CALML3P27482 149 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 NUCB1Q02818 461 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 ITGA7Q13683 1181 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 SLC43A3Q8NBI5 491 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 MAFAQ8NHW3 353 aaPredicted RBP20.32■□□□□ 0.84
LMNA-212ENST00000470835 CLEC4DQ8WXI8 215 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 ZKSCAN3Q9BRR0 538 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 OSBPL3Q9H4L5 887 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 DIAPH3Q9NSV4 1193 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 PNMA2Q9UL42 364 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 PRUNE2Q8WUY3 3088 aa20.32■□□□□ 0.84
LMNA-212ENST00000470835 WDR19Q8NEZ3 1342 aa20.31■□□□□ 0.84
LMNA-212ENST00000470835 MYO9BQ13459 2157 aa20.31■□□□□ 0.84
LMNA-212ENST00000470835 ZNF213O14771 459 aa20.31■□□□□ 0.84
LMNA-212ENST00000470835 TMEM240Q5SV17 173 aa20.31■□□□□ 0.84
LMNA-212ENST00000470835 CWC27Q6UX04 472 aaKnown RBP20.31■□□□□ 0.84
LMNA-212ENST00000470835 RNF207Q6ZRF8 634 aa20.31■□□□□ 0.84
LMNA-212ENST00000470835 KIAA1217Q5T5P2 1943 aa20.31■□□□□ 0.84
LMNA-212ENST00000470835 GRIN2DO15399 1336 aa20.3■□□□□ 0.84
LMNA-212ENST00000470835 SCN10AQ9Y5Y9 1956 aa20.3■□□□□ 0.84
LMNA-212ENST00000470835 LOC102724159A0A0B4J2E5 919 aa20.3■□□□□ 0.84
LMNA-212ENST00000470835 FOSL2P15408 326 aa20.3■□□□□ 0.84
LMNA-212ENST00000470835 CYP2C18P33260 490 aa20.3■□□□□ 0.84
LMNA-212ENST00000470835 PSMC6P62333 389 aa20.3■□□□□ 0.84
LMNA-212ENST00000470835 PWP2Q15269 919 aaKnown RBP20.3■□□□□ 0.84
LMNA-212ENST00000470835 DUSP28Q4G0W2 176 aa20.3■□□□□ 0.84
LMNA-212ENST00000470835 GPATCH4Q5T3I0 446 aaKnown RBP20.3■□□□□ 0.84
LMNA-212ENST00000470835 PSRC1Q6PGN9 363 aaPredicted RBP20.3■□□□□ 0.84
LMNA-212ENST00000470835 C16orf59Q7L2K0 433 aa20.3■□□□□ 0.84
LMNA-212ENST00000470835 HIPK3Q9H422 1215 aa20.3■□□□□ 0.84
LMNA-212ENST00000470835 GOLGA8HP0CJ92 632 aa20.29■□□□□ 0.84
LMNA-212ENST00000470835 ACRP10323 421 aa20.29■□□□□ 0.84
LMNA-212ENST00000470835 RPS6P62753 249 aaKnown RBP20.29■□□□□ 0.84
LMNA-212ENST00000470835 DGKHQ86XP1 1220 aa20.29■□□□□ 0.84
LMNA-212ENST00000470835 EXOC6Q8TAG9 804 aa20.29■□□□□ 0.84
LMNA-212ENST00000470835 SEZ6LQ9BYH1 1024 aa20.29■□□□□ 0.84
LMNA-212ENST00000470835 WDR11Q9BZH6 1224 aa20.29■□□□□ 0.84
LMNA-212ENST00000470835 UMODL1Q5DID0 1318 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 TANC1Q9C0D5 1861 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 SCN5AQ14524 2016 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 B4GALT4O60513 344 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 KDM4AO75164 1064 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 NT5C2P49902 561 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 USH1GQ495M9 461 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 ZNF365Q70YC5 407 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 IQCA1Q86XH1 822 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 PNMA1Q8ND90 353 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 MPHOSPH6Q99547 160 aaKnown RBP20.28■□□□□ 0.84
LMNA-212ENST00000470835 TRPV6Q9H1D0 765 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 CPVLQ9H3G5 476 aa20.28■□□□□ 0.84
LMNA-212ENST00000470835 RBM47A0AV96 593 aaKnown RBP20.27■□□□□ 0.84
LMNA-212ENST00000470835 HIP1O00291 1037 aa20.27■□□□□ 0.84
LMNA-212ENST00000470835 PDE4DQ08499 809 aa20.27■□□□□ 0.84
LMNA-212ENST00000470835 RASIP1Q5U651 963 aa20.27■□□□□ 0.84
LMNA-212ENST00000470835 OR6J1Q8NGC5 347 aa20.27■□□□□ 0.84
LMNA-212ENST00000470835 TIFAQ96CG3 184 aa20.27■□□□□ 0.84
LMNA-212ENST00000470835 UBA5Q9GZZ9 404 aa20.27■□□□□ 0.84
LMNA-212ENST00000470835 KAT14Q9H8E8 782 aa20.27■□□□□ 0.84
LMNA-212ENST00000470835 IL23AQ9NPF7 189 aa20.27■□□□□ 0.84
LMNA-212ENST00000470835 GRXCR1A8MXD5 290 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 B4E1Z4 1266 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 EDNRBP24530 442 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 CPT1AP50416 773 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 GRIN2CQ14957 1233 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 PPP2R5BQ15173 497 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 CDC37Q16543 378 aaPredicted RBP20.26■□□□□ 0.83
LMNA-212ENST00000470835 CCDC178Q5BJE1 867 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 DNERQ8NFT8 737 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 DSCC1Q9BVC3 393 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 NOC4LQ9BVI4 516 aaKnown RBP20.26■□□□□ 0.83
LMNA-212ENST00000470835 COL25A1Q9BXS0 654 aaPredicted RBP20.26■□□□□ 0.83
LMNA-212ENST00000470835 POLR3EQ9NVU0 708 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 RAD50Q92878 1312 aa20.26■□□□□ 0.83
LMNA-212ENST00000470835 MYL3P08590 195 aa20.25■□□□□ 0.83
LMNA-212ENST00000470835 PBX2P40425 430 aa20.25■□□□□ 0.83
LMNA-212ENST00000470835 CCL23P55773 120 aa20.25■□□□□ 0.83
LMNA-212ENST00000470835 PURAQ00577 322 aaKnown RBP20.25■□□□□ 0.83
LMNA-212ENST00000470835 IMMTQ16891 758 aaKnown RBP20.25■□□□□ 0.83
LMNA-212ENST00000470835 PBX4Q9BYU1 374 aa20.25■□□□□ 0.83
LMNA-212ENST00000470835 WNT8AQ9H1J5 351 aa20.25■□□□□ 0.83
LMNA-212ENST00000470835 ALDH8A1Q9H2A2 487 aaPredicted RBP20.25■□□□□ 0.83
LMNA-212ENST00000470835 MTIF3Q9H2K0 278 aaKnown RBP20.25■□□□□ 0.83
LMNA-212ENST00000470835 ZNF576Q9H609 170 aa20.25■□□□□ 0.83
LMNA-212ENST00000470835 ENAHQ8N8S7 591 aaPredicted RBP20.24■□□□□ 0.83
LMNA-212ENST00000470835 SCFD2Q8WU76 684 aa20.24■□□□□ 0.83
LMNA-212ENST00000470835 HERVK_113Q902F9 699 aa20.24■□□□□ 0.83
LMNA-212ENST00000470835 ZSCAN10Q96SZ4 725 aaPredicted RBP20.24■□□□□ 0.83
LMNA-212ENST00000470835 TNKSO95271 1327 aa20.24■□□□□ 0.83
LMNA-212ENST00000470835 VCANP13611 3396 aa20.23■□□□□ 0.83
LMNA-212ENST00000470835 CHD9Q3L8U1 2897 aa20.23■□□□□ 0.83
LMNA-212ENST00000470835 B4DLN1 442 aa20.23■□□□□ 0.83
LMNA-212ENST00000470835 NKRFO15226 690 aaKnown RBP eCLIP20.23■□□□□ 0.83
LMNA-212ENST00000470835 MRPL12P52815 198 aaKnown RBP20.23■□□□□ 0.83
LMNA-212ENST00000470835 ASPRV1Q53RT3 343 aa20.23■□□□□ 0.83
LMNA-212ENST00000470835 BRDTQ58F21 947 aaPredicted RBP20.23■□□□□ 0.83
LMNA-212ENST00000470835 ADGRF4Q8IZF3 695 aa20.23■□□□□ 0.83
LMNA-212ENST00000470835 ANKS1AQ92625 1134 aa20.23■□□□□ 0.83
LMNA-212ENST00000470835 MTG1Q9BT17 334 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms