RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 IQSEC1Q6DN90 963 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 MFSD5Q6N075 450 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 RASEFQ8IZ41 740 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 FAM161BQ96MY7 647 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 CDX2Q99626 313 aaPredicted RBP13.52□□□□□ -0.25
HLA-C-206ENST00000470363 DSCC1Q9BVC3 393 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 CCPG1Q9ULG6 757 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 MCM3APO60318 1980 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 CHD9Q3L8U1 2897 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 MROH7Q68CQ1 1323 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 A0A0U1RQG5 324 aaPredicted RBP13.51□□□□□ -0.25
HLA-C-206ENST00000470363 RBM47A0AV96 593 aaKnown RBP13.51□□□□□ -0.25
HLA-C-206ENST00000470363 DLL1O00548 723 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 NFIBO00712 420 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 BAATQ14032 418 aaPredicted RBP13.51□□□□□ -0.25
HLA-C-206ENST00000470363 RRP12Q5JTH9 1297 aaKnown RBP13.51□□□□□ -0.25
HLA-C-206ENST00000470363 ZNF697Q5TEC3 545 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 CREB3L3Q68CJ9 461 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 MFSD6Q6ZSS7 791 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 ANKS1AQ92625 1134 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 KIF2CQ99661 725 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 SPC25Q9HBM1 224 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 TAF6LQ9Y6J9 622 aa13.51□□□□□ -0.25
HLA-C-206ENST00000470363 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
HLA-C-206ENST00000470363 SPTBN5Q9NRC6 3674 aaKnown RBP13.51□□□□□ -0.25
HLA-C-206ENST00000470363 NEDD4P46934 1319 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 FRMPD2Q68DX3 1309 aaPredicted RBP13.5□□□□□ -0.25
HLA-C-206ENST00000470363 LOC102724159A0A0B4J2E5 919 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 SLC27A2O14975 620 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 PWP2Q15269 919 aaKnown RBP13.5□□□□□ -0.25
HLA-C-206ENST00000470363 FSCN1Q16658 493 aaKnown RBP13.5□□□□□ -0.25
HLA-C-206ENST00000470363 CCDC96Q2M329 555 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 TMEM240Q5SV17 173 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 CXCL17Q6UXB2 119 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 NSMFQ6X4W1 530 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 TLK2Q86UE8 772 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 FBXO16Q8IX29 292 aaPredicted RBP13.5□□□□□ -0.25
HLA-C-206ENST00000470363 RNPC3Q96LT9 517 aaKnown RBP13.5□□□□□ -0.25
HLA-C-206ENST00000470363 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.5□□□□□ -0.253e-7■■□□□ 12.7
HLA-C-206ENST00000470363 VTA1Q9NP79 307 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 ISY1Q9ULR0 285 aaKnown RBP13.5□□□□□ -0.25
HLA-C-206ENST00000470363 MTMR7Q9Y216 660 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 SNX14Q9Y5W7 946 aa13.5□□□□□ -0.25
HLA-C-206ENST00000470363 LCTP09848 1927 aa13.49□□□□□ -0.25
HLA-C-206ENST00000470363 DYNC1LI2O43237 492 aaPredicted RBP13.49□□□□□ -0.25
HLA-C-206ENST00000470363 EPB41L2O43491 1005 aaKnown RBP13.49□□□□□ -0.25
HLA-C-206ENST00000470363 CABYRO75952 493 aa13.49□□□□□ -0.25
HLA-C-206ENST00000470363 EDNRBP24530 442 aa13.49□□□□□ -0.25
HLA-C-206ENST00000470363 ALDH5A1P51649 535 aaPredicted RBP13.49□□□□□ -0.25
HLA-C-206ENST00000470363 DUSP28Q4G0W2 176 aa13.49□□□□□ -0.25
HLA-C-206ENST00000470363 EEPD1Q7L9B9 569 aa13.49□□□□□ -0.25
HLA-C-206ENST00000470363 VWCEQ96DN2 955 aa13.49□□□□□ -0.25
HLA-C-206ENST00000470363 TOMM22Q9NS69 142 aa13.49□□□□□ -0.25
HLA-C-206ENST00000470363 CUL9Q8IWT3 2517 aa13.49□□□□□ -0.25
HLA-C-206ENST00000470363 WDR19Q8NEZ3 1342 aa13.48□□□□□ -0.25
HLA-C-206ENST00000470363 TMEM265A0A087WTH1 108 aa13.48□□□□□ -0.25
HLA-C-206ENST00000470363 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.48□□□□□ -0.25
HLA-C-206ENST00000470363 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.48□□□□□ -0.25
HLA-C-206ENST00000470363 CYP21A2P08686 494 aa13.48□□□□□ -0.25
HLA-C-206ENST00000470363 CSF2RAP15509 400 aa13.48□□□□□ -0.25
HLA-C-206ENST00000470363 NT5C2P49902 561 aa13.48□□□□□ -0.25
HLA-C-206ENST00000470363 ITGA7Q13683 1181 aa13.48□□□□□ -0.25
HLA-C-206ENST00000470363 RGS22Q8NE09 1264 aa13.48□□□□□ -0.25
HLA-C-206ENST00000470363 VTI1AQ96AJ9 217 aa13.48□□□□□ -0.25
HLA-C-206ENST00000470363 SEZ6LQ9BYH1 1024 aa13.48□□□□□ -0.25
HLA-C-206ENST00000470363 RNF41Q9H4P4 317 aaPredicted RBP13.48□□□□□ -0.25
HLA-C-206ENST00000470363 CHD7Q9P2D1 2997 aa13.48□□□□□ -0.25
HLA-C-206ENST00000470363 MUC3AQ02505 3323 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 ZNF213O14771 459 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 RPS6P62753 249 aaKnown RBP13.47□□□□□ -0.25
HLA-C-206ENST00000470363 ADCK5Q3MIX3 580 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 SLC30A10Q6XR72 485 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 NOL8Q76FK4 1167 aaKnown RBP13.47□□□□□ -0.25
HLA-C-206ENST00000470363 ESR2Q92731 530 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 KCNB2Q92953 911 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 ZKSCAN3Q9BRR0 538 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 AP5M1Q9H0R1 490 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 ZSWIM5Q9P217 1185 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 ADD3Q9UEY8 706 aaKnown RBP13.47□□□□□ -0.25
HLA-C-206ENST00000470363 CTNNA3Q9UI47 895 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 PNMA2Q9UL42 364 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 LRRC37A2A6NM11 1700 aa13.47□□□□□ -0.25
HLA-C-206ENST00000470363 UMODL1Q5DID0 1318 aa13.46□□□□□ -0.25
HLA-C-206ENST00000470363 GOLGA8HP0CJ92 632 aa13.46□□□□□ -0.25
HLA-C-206ENST00000470363 CPA1P15085 419 aa13.46□□□□□ -0.25
HLA-C-206ENST00000470363 CYP2C18P33260 490 aa13.46□□□□□ -0.25
HLA-C-206ENST00000470363 PPIGQ13427 754 aaKnown RBP eCLIP13.46□□□□□ -0.25
HLA-C-206ENST00000470363 COL9A3Q14050 684 aaPredicted RBP13.46□□□□□ -0.25
HLA-C-206ENST00000470363 IMMTQ16891 758 aaKnown RBP13.46□□□□□ -0.25
HLA-C-206ENST00000470363 GPATCH4Q5T3I0 446 aaKnown RBP13.46□□□□□ -0.25
HLA-C-206ENST00000470363 RNF20Q5VTR2 975 aa13.46□□□□□ -0.25
HLA-C-206ENST00000470363 RNF207Q6ZRF8 634 aa13.46□□□□□ -0.25
HLA-C-206ENST00000470363 STOX1Q6ZVD7 989 aa13.46□□□□□ -0.25
HLA-C-206ENST00000470363 ZNF365Q70YC5 407 aa13.46□□□□□ -0.25
HLA-C-206ENST00000470363 TMEM199Q8N511 208 aa13.46□□□□□ -0.25
HLA-C-206ENST00000470363 DNERQ8NFT8 737 aa13.46□□□□□ -0.25
HLA-C-206ENST00000470363 MYLIPQ8WY64 445 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms