RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 ASCL5Q7RTU5 278 aa15.22■□□□□ 0.03
HDAC6-217ENST00000469223 FBXL6Q8N531 539 aa15.22■□□□□ 0.03
HDAC6-217ENST00000469223 FAM133AQ8N9E0 248 aa15.22■□□□□ 0.03
HDAC6-217ENST00000469223 ZNF512BQ96KM6 892 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-217ENST00000469223 ANTXR1Q9H6X2 564 aa15.22■□□□□ 0.03
HDAC6-217ENST00000469223 FBXO40Q9UH90 709 aa15.22■□□□□ 0.03
HDAC6-217ENST00000469223 CTDP1Q9Y5B0 961 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-217ENST00000469223 MAP1BP46821 2468 aaKnown RBP15.22■□□□□ 0.03
HDAC6-217ENST00000469223 SPTBN2O15020 2390 aa15.21■□□□□ 0.03
HDAC6-217ENST00000469223 PNMA6EA0A0J9YXQ4 647 aa15.21■□□□□ 0.03
HDAC6-217ENST00000469223 ATP2A1O14983 1001 aa15.21■□□□□ 0.03
HDAC6-217ENST00000469223 MYL3P08590 195 aa15.21■□□□□ 0.03
HDAC6-217ENST00000469223 PURAQ00577 322 aaKnown RBP15.21■□□□□ 0.03
HDAC6-217ENST00000469223 BFSP2Q13515 415 aa15.21■□□□□ 0.03
HDAC6-217ENST00000469223 SMAD2Q15796 467 aaKnown RBP15.21■□□□□ 0.03
HDAC6-217ENST00000469223 PKN1Q16512 942 aa15.21■□□□□ 0.03
HDAC6-217ENST00000469223 PTPROQ16827 1216 aa15.21■□□□□ 0.03
HDAC6-217ENST00000469223 BANK1Q8NDB2 785 aa15.21■□□□□ 0.03
HDAC6-217ENST00000469223 DCP1AQ9NPI6 582 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-217ENST00000469223 GPR108Q9NPR9 543 aa15.21■□□□□ 0.03
HDAC6-217ENST00000469223 POLR3EQ9NVU0 708 aa15.21■□□□□ 0.03
HDAC6-217ENST00000469223 DBNLQ9UJU6 430 aaKnown RBP15.21■□□□□ 0.03
HDAC6-217ENST00000469223 MYH7P12883 1935 aa15.21■□□□□ 0.02
HDAC6-217ENST00000469223 CFAP47Q6ZTR5 3102 aa15.21■□□□□ 0.02
HDAC6-217ENST00000469223 ZBED4O75132 1171 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 KRT37O76014 449 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 RGS20O76081 388 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 ID4P47928 161 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 COL19A1Q14993 1142 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 TCTN1Q2MV58 587 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 NBPF20Q3BBV1 942 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 RPAINQ86UA6 219 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 FAM9BQ8IZU0 186 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 CHST13Q8NET6 341 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 CTNNA3Q9UI47 895 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 NOD1Q9Y239 953 aa15.2■□□□□ 0.02
HDAC6-217ENST00000469223 CYP2D7A0A087X1C5 515 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 PRR23AA6NEV1 266 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 ASB14A6NK59 587 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 GNAI3P08754 354 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 ALDH1L2Q3SY69 923 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 TAPT1Q6NXT6 567 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 CNKSR3Q6P9H4 555 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 LCORLQ8N3X6 602 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 PRPF38AQ8NAV1 312 aaKnown RBP15.19■□□□□ 0.02
HDAC6-217ENST00000469223 KIFC2Q96AC6 838 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 CCDC17Q96LX7 622 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 MTG1Q9BT17 334 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-217ENST00000469223 KANSL2Q9H9L4 492 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 SLC38A10Q9HBR0 1119 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 A1CFQ9NQ94 594 aaKnown RBP15.19■□□□□ 0.02
HDAC6-217ENST00000469223 Q9Y3F1 56 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 ATRXP46100 2492 aa15.19■□□□□ 0.02
HDAC6-217ENST00000469223 H0Y858 1186 aa15.18■□□□□ 0.02
HDAC6-217ENST00000469223 MBTPS2O43462 519 aa15.18■□□□□ 0.02
HDAC6-217ENST00000469223 NDUFB10O96000 172 aa15.18■□□□□ 0.02
HDAC6-217ENST00000469223 LTBRP36941 435 aa15.18■□□□□ 0.02
HDAC6-217ENST00000469223 CDK8P49336 464 aa15.18■□□□□ 0.02
HDAC6-217ENST00000469223 OS9Q13438 667 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-217ENST00000469223 LRRFIP1Q32MZ4 808 aaKnown RBP15.18■□□□□ 0.02
HDAC6-217ENST00000469223 NSUN3Q9H649 340 aaKnown RBP15.18■□□□□ 0.02
HDAC6-217ENST00000469223 ACAD9Q9H845 621 aa15.18■□□□□ 0.02
HDAC6-217ENST00000469223 TLR9Q9NR96 1032 aa15.18■□□□□ 0.02
HDAC6-217ENST00000469223 USP24Q9UPU5 2620 aa15.17■□□□□ 0.02
HDAC6-217ENST00000469223 STXBP3O00186 592 aa15.17■□□□□ 0.02
HDAC6-217ENST00000469223 GPNMBQ14956 572 aa15.17■□□□□ 0.02
HDAC6-217ENST00000469223 IQSEC1Q6DN90 963 aa15.17■□□□□ 0.02
HDAC6-217ENST00000469223 CCDC155Q8N6L0 562 aa15.17■□□□□ 0.02
HDAC6-217ENST00000469223 AFAP1L1Q8TED9 768 aa15.17■□□□□ 0.02
HDAC6-217ENST00000469223 FSD1Q9BTV5 496 aa15.17■□□□□ 0.02
HDAC6-217ENST00000469223 API5Q9BZZ5 524 aaKnown RBP15.17■□□□□ 0.02
HDAC6-217ENST00000469223 IRF2BPLQ9H1B7 796 aa15.17■□□□□ 0.02
HDAC6-217ENST00000469223 GPHNQ9NQX3 736 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-217ENST00000469223 NOB1Q9ULX3 412 aaKnown RBP15.17■□□□□ 0.02
HDAC6-217ENST00000469223 COG6Q9Y2V7 657 aa15.17■□□□□ 0.02
HDAC6-217ENST00000469223 ANKRD11Q6UB99 2663 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-217ENST00000469223 PROB1E7EW31 1015 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 KDM4AO75164 1064 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 PDE6AP16499 860 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 CPT1AP50416 773 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 ZXDAP98168 799 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 DLX2Q07687 328 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-217ENST00000469223 EPC2Q52LR7 807 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 NFRKBQ6P4R8 1299 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 TMED8Q6PL24 325 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-217ENST00000469223 KIAA1211Q6ZU35 1233 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 LRRC8DQ7L1W4 858 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 VTA1Q9NP79 307 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 RNF146Q9NTX7 359 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 TRPC6Q9Y210 931 aa15.16■□□□□ 0.02
HDAC6-217ENST00000469223 PKD1L2Q7Z442 2459 aa15.15■□□□□ 0.02
HDAC6-217ENST00000469223 MED19A0JLT2 244 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-217ENST00000469223 NBNO60934 754 aa15.15■□□□□ 0.02
HDAC6-217ENST00000469223 CHMP4BP1P59074 171 aa15.15■□□□□ 0.02
HDAC6-217ENST00000469223 SMAD4Q13485 552 aaKnown RBP15.15■□□□□ 0.02
HDAC6-217ENST00000469223 GPM6BQ13491 265 aa15.15■□□□□ 0.02
HDAC6-217ENST00000469223 DUSP28Q4G0W2 176 aa15.15■□□□□ 0.02
HDAC6-217ENST00000469223 C16orf86Q6ZW13 317 aa15.15■□□□□ 0.02
HDAC6-217ENST00000469223 OR6J1Q8NGC5 347 aa15.15■□□□□ 0.02
HDAC6-217ENST00000469223 CAGE1Q8TC20 777 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms