RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 ANKLE1Q8NAG6 615 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 MORC4Q8TE76 937 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 NSUN6Q8TEA1 469 aaKnown RBP9.88□□□□□ -0.83
SSBP1-208ENST00000469123 CCDC12Q8WUD4 166 aaPredicted RBP9.88□□□□□ -0.83
SSBP1-208ENST00000469123 CUL5Q93034 780 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 IWS1Q96ST2 819 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 RNF26Q9BY78 433 aaPredicted RBP9.88□□□□□ -0.83
SSBP1-208ENST00000469123 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.88□□□□□ -0.83
SSBP1-208ENST00000469123 CPVLQ9H3G5 476 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 ABHD16BQ9H3Z7 469 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 GCOM1H8Y6P7 765 aaPredicted RBP9.87□□□□□ -0.83
SSBP1-208ENST00000469123 PIK3CDO00329 1044 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 SEPT4O43236 478 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 SGPL1O95470 568 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 POLR2MP0CAP2 368 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 AKR1A1P14550 325 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 RXRAP19793 462 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 PDIA3P30101 505 aaKnown RBP9.87□□□□□ -0.83
SSBP1-208ENST00000469123 HSD17B4P51659 736 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 NEK4P51957 841 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 BAATQ14032 418 aaPredicted RBP9.87□□□□□ -0.83
SSBP1-208ENST00000469123 CCL14Q16627 93 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 IFFO2Q5TF58 517 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 MCTP2Q6DN12 878 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 ARMCX2Q7L311 632 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 CCDC144CPQ8IYA2 1237 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 UNC93B1Q9H1C4 597 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 SLKQ9H2G2 1235 aaPredicted RBP9.87□□□□□ -0.83
SSBP1-208ENST00000469123 EHMT1Q9H9B1 1298 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 VTA1Q9NP79 307 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 FLRT1Q9NZU1 646 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 LCTP09848 1927 aa9.87□□□□□ -0.83
SSBP1-208ENST00000469123 PRPF3O43395 683 aaKnown RBP9.86□□□□□ -0.83
SSBP1-208ENST00000469123 ST18O60284 1047 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 PPP1R11O60927 126 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-208ENST00000469123 STAM2O75886 525 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 CALML3P27482 149 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 CYP2C19P33261 490 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 MCM2P49736 904 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 ALDH5A1P51649 535 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-208ENST00000469123 FUT2Q10981 343 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 MTFR1Q15390 333 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 SLC35G1Q2M3R5 365 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 XRRA1Q6P2D8 792 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 CCDC148Q8NFR7 591 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 U2AF1L4Q8WU68 220 aaKnown RBP9.86□□□□□ -0.83
SSBP1-208ENST00000469123 ZSCAN31Q96LW9 406 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-208ENST00000469123 CRISPLD2Q9H0B8 497 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 SH3GLB2Q9NR46 395 aa9.86□□□□□ -0.83
SSBP1-208ENST00000469123 SH2B1Q9NRF2 756 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-208ENST00000469123 FAM217BQ9NTX9 383 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-208ENST00000469123 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-208ENST00000469123 DDX20Q9UHI6 824 aaKnown RBP9.86□□□□□ -0.83
SSBP1-208ENST00000469123 FRMPD3Q5JV73 1810 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 ESYT2A0FGR8 921 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 NKRFO15226 690 aaKnown RBP eCLIP9.85□□□□□ -0.83
SSBP1-208ENST00000469123 PFKFB2O60825 505 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 CFBP00751 764 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 RARBP10826 455 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 SCG2P13521 617 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 XBP1P17861 261 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 EDNRBP24530 442 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 GNA11P29992 359 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 CDC27P30260 824 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 ADD1P35611 737 aaKnown RBP9.85□□□□□ -0.83
SSBP1-208ENST00000469123 RGS19P49795 217 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 AK2P54819 239 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 CNTN2Q02246 1040 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 SSRP1Q08945 709 aaKnown RBP9.85□□□□□ -0.83
SSBP1-208ENST00000469123 ACVR2BQ13705 512 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 PFKFB3Q16875 520 aaPredicted RBP9.85□□□□□ -0.83
SSBP1-208ENST00000469123 ARHGEF16Q5VV41 709 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 SLC30A10Q6XR72 485 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 HEATR3Q7Z4Q2 680 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 RAB11FIP4Q86YS3 637 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 SMARCC2Q8TAQ2 1214 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 BICD2Q8TD16 824 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 SYTL5Q8TDW5 730 aaPredicted RBP9.85□□□□□ -0.83
SSBP1-208ENST00000469123 WASF1Q92558 559 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 FGD4Q96M96 766 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 TBC1D32Q96NH3 1257 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 RMDN3Q96TC7 470 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 BACH2Q9BYV9 841 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 PSTPIP2Q9H939 334 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 SPC25Q9HBM1 224 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 BARHL2Q9NY43 387 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 OGDHLQ9ULD0 1010 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 FAM184BQ9ULE4 1060 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 LIMCH1Q9UPQ0 1083 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 Q9Y3F1 56 aa9.85□□□□□ -0.83
SSBP1-208ENST00000469123 V9GY48 417 aaPredicted RBP9.85□□□□□ -0.83
SSBP1-208ENST00000469123 STK36Q9NRP7 1315 aa9.84□□□□□ -0.83
SSBP1-208ENST00000469123 PDE4DIPQ5VU43 2346 aa9.84□□□□□ -0.83
SSBP1-208ENST00000469123 KIAA1217Q5T5P2 1943 aa9.84□□□□□ -0.83
SSBP1-208ENST00000469123 SOWAHBA6NEL2 793 aa9.84□□□□□ -0.83
SSBP1-208ENST00000469123 OPLAHO14841 1288 aa9.84□□□□□ -0.83
SSBP1-208ENST00000469123 DEXIO95424 95 aa9.84□□□□□ -0.83
SSBP1-208ENST00000469123 SNAI1O95863 264 aaPredicted RBP9.84□□□□□ -0.83
SSBP1-208ENST00000469123 FOSP01100 380 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms