RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 GNPTABQ3T906 1256 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 VHLLQ6RSH7 139 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 CYP2R1Q6VVX0 501 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 NLGN1Q8N2Q7 840 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 ZDHHC15Q96MV8 337 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 IRAK3Q9Y616 596 aa7.6□□□□□ -1.19
LSM5-209ENST00000468872 A0A1W2PQ27 194 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 A0A1W2PQ64 194 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 A0A1W2PQC6 194 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 A0A1W2PQD8 194 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 CD3EP07766 207 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 MSL3P1P0C860 447 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 PI3P19957 117 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 CDR1P51861 262 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 POU4F1Q01851 419 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 MVKQ03426 396 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 TMEM62Q0P6H9 643 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 RASGRF1Q13972 1273 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 TTLL10Q6ZVT0 673 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 TMC6Q7Z403 805 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 JAMLQ86YT9 394 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 KLHL6Q8WZ60 621 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 WHRNQ9P202 907 aa7.59□□□□□ -1.19
LSM5-209ENST00000468872 DIS3Q9Y2L1 958 aaKnown RBP7.59□□□□□ -1.19
LSM5-209ENST00000468872 MRPL42Q9Y6G3 142 aaKnown RBP7.59□□□□□ -1.19
LSM5-209ENST00000468872 SLC7A5Q01650 507 aa7.58□□□□□ -1.2
LSM5-209ENST00000468872 PPP2R5DQ14738 602 aa7.58□□□□□ -1.2
LSM5-209ENST00000468872 CBX2Q14781 532 aaPredicted RBP7.58□□□□□ -1.2
LSM5-209ENST00000468872 HEATR6Q6AI08 1181 aaKnown RBP7.58□□□□□ -1.2
LSM5-209ENST00000468872 SDE2Q6IQ49 451 aa7.58□□□□□ -1.2
LSM5-209ENST00000468872 RPTNQ6XPR3 784 aa7.58□□□□□ -1.2
LSM5-209ENST00000468872 ADCY4Q8NFM4 1077 aa7.58□□□□□ -1.2
LSM5-209ENST00000468872 PANK1Q8TE04 598 aa7.58□□□□□ -1.2
LSM5-209ENST00000468872 MZB1Q8WU39 189 aa7.58□□□□□ -1.2
LSM5-209ENST00000468872 PTCHD1Q96NR3 888 aa7.58□□□□□ -1.2
LSM5-209ENST00000468872 KLHL25Q9H0H3 589 aa7.58□□□□□ -1.2
LSM5-209ENST00000468872 EPHX1P07099 455 aa7.57□□□□□ -1.2
LSM5-209ENST00000468872 NCAPHQ15003 741 aa7.57□□□□□ -1.2
LSM5-209ENST00000468872 TCERG1LQ5VWI1 586 aa7.57□□□□□ -1.2
LSM5-209ENST00000468872 KIAA1211LQ6NV74 962 aa7.57□□□□□ -1.2
LSM5-209ENST00000468872 DNAJC7Q99615 494 aa7.57□□□□□ -1.2
LSM5-209ENST00000468872 GBP3Q9H0R5 595 aa7.57□□□□□ -1.2
LSM5-209ENST00000468872 RAPGEFL1Q9UHV5 662 aa7.57□□□□□ -1.2
LSM5-209ENST00000468872 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
LSM5-209ENST00000468872 IRS4O14654 1257 aaPredicted RBP7.56□□□□□ -1.2
LSM5-209ENST00000468872 TBC1D8O95759 1140 aa7.56□□□□□ -1.2
LSM5-209ENST00000468872 INHBBP09529 407 aa7.56□□□□□ -1.2
LSM5-209ENST00000468872 ADAT2Q7Z6V5 191 aaKnown RBP7.56□□□□□ -1.2
LSM5-209ENST00000468872 LDHDQ86WU2 507 aa7.56□□□□□ -1.2
LSM5-209ENST00000468872 LILRB2Q8N423 598 aa7.56□□□□□ -1.2
LSM5-209ENST00000468872 RNPC3Q96LT9 517 aaKnown RBP7.56□□□□□ -1.2
LSM5-209ENST00000468872 MCMBPQ9BTE3 642 aa7.56□□□□□ -1.2
LSM5-209ENST00000468872 EPB41L4AQ9HCS5 686 aaPredicted RBP7.56□□□□□ -1.2
LSM5-209ENST00000468872 MAPKAPK2P49137 400 aa7.55□□□□□ -1.2
LSM5-209ENST00000468872 IFRD2Q12894 506 aaPredicted RBP7.55□□□□□ -1.2
LSM5-209ENST00000468872 NR1I3Q14994 352 aa7.55□□□□□ -1.2
LSM5-209ENST00000468872 PLEKHN1Q494U1 663 aaPredicted RBP7.55□□□□□ -1.2
LSM5-209ENST00000468872 RCSD1Q6JBY9 416 aa7.55□□□□□ -1.2
LSM5-209ENST00000468872 LILRA6Q6PI73 481 aa7.55□□□□□ -1.2
LSM5-209ENST00000468872 IGDCC3Q8IVU1 814 aa7.55□□□□□ -1.2
LSM5-209ENST00000468872 TMEM151BQ8IW70 566 aa7.55□□□□□ -1.2
LSM5-209ENST00000468872 FGD4Q96M96 766 aa7.55□□□□□ -1.2
LSM5-209ENST00000468872 KANSL2Q9H9L4 492 aa7.55□□□□□ -1.2
LSM5-209ENST00000468872 PDLIM7Q9NR12 457 aa7.55□□□□□ -1.2
LSM5-209ENST00000468872 AURKAO14965 403 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 SRGAP3O43295 1099 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 PPM1BO75688 479 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 L1CAMP32004 1257 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 CORO7P57737 925 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 MTERF2Q49AM1 385 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 EEF1DP3Q658K8 133 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 ZC3H14Q6PJT7 736 aaKnown RBP7.54□□□□□ -1.2
LSM5-209ENST00000468872 SPATC1Q76KD6 591 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 TMEFF1Q8IYR6 380 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 ST13P5Q8NFI4 369 aaPredicted RBP7.54□□□□□ -1.2
LSM5-209ENST00000468872 DACT3Q96B18 629 aaPredicted RBP7.54□□□□□ -1.2
LSM5-209ENST00000468872 CGGBP1Q9UFW8 167 aaPredicted RBP7.54□□□□□ -1.2
LSM5-209ENST00000468872 SUSD2Q9UGT4 822 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 PCDHA5Q9Y5H7 936 aa7.54□□□□□ -1.2
LSM5-209ENST00000468872 A0A1W2PQJ5 194 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 STXBP3O00186 592 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 SUSD5O60279 629 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 DIAPH1O60610 1272 aaKnown RBP7.53□□□□□ -1.2
LSM5-209ENST00000468872 VAMP4O75379 141 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 CYBBP04839 570 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 DBHP09172 617 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 BMP7P18075 431 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 AFF3P51826 1226 aaKnown RBP7.53□□□□□ -1.2
LSM5-209ENST00000468872 NCKAP1LP55160 1127 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 BICRALQ6AI39 1079 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 PAQR3Q6TCH7 311 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 EEPD1Q7L9B9 569 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 ARHGEF39Q8N4T4 335 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 NLGN2Q8NFZ4 835 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 RCC1LQ96I51 464 aaKnown RBP7.53□□□□□ -1.2
LSM5-209ENST00000468872 PARD6AQ9NPB6 346 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 PFDN2Q9UHV9 154 aa7.53□□□□□ -1.2
LSM5-209ENST00000468872 TACR1P25103 407 aa7.52□□□□□ -1.21
LSM5-209ENST00000468872 CANXP27824 592 aaKnown RBP7.52□□□□□ -1.21
LSM5-209ENST00000468872 ZNF200P98182 395 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms