RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 DDX25Q9UHL0 483 aaKnown RBP11.5□□□□□ -0.57
MSH5-213ENST00000468136 HACL1Q9UJ83 578 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 MAN1B1Q9UKM7 699 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 KDM3AQ9Y4C1 1321 aa11.5□□□□□ -0.57
MSH5-213ENST00000468136 WNT7AO00755 349 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 MARCH6O60337 910 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 SREBF1P36956 1147 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 PLCB2Q00722 1185 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 Q4G0T1 1027 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 SPECC1Q5M775 1068 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 NOL9Q5SY16 702 aaKnown RBP11.49□□□□□ -0.57
MSH5-213ENST00000468136 KRT79Q5XKE5 535 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 PDXDC2PQ6P474 469 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 RASGRP2Q7LDG7 609 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 CABP7Q86V35 215 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 MCF2L2Q86YR7 1114 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 SCYL3Q8IZE3 742 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 AOPEPQ8N6M6 819 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 PDILTQ8N807 584 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 ANO3Q9BYT9 981 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 NT5C3AQ9H0P0 336 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 TMEM60Q9H2L4 133 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 PICK1Q9NRD5 415 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 KBTBD4Q9NVX7 518 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 IMPACTQ9P2X3 320 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 ZKSCAN5Q9Y2L8 839 aa11.49□□□□□ -0.57
MSH5-213ENST00000468136 DICER1Q9UPY3 1922 aaKnown RBP11.48□□□□□ -0.57
MSH5-213ENST00000468136 GCOM1H8Y6P7 765 aaPredicted RBP11.48□□□□□ -0.57
MSH5-213ENST00000468136 MEIS2O14770 477 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 NRDCO43847 1150 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 POLR2MP0CAP2 368 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 GSDMDP57764 484 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 JAG1P78504 1218 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 GHRHRQ02643 423 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 STIM1Q13586 685 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 IL17AQ16552 155 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 TBC1D10BQ4KMP7 808 aaPredicted RBP11.48□□□□□ -0.57
MSH5-213ENST00000468136 FAM83BQ5T0W9 1011 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 HAUS3Q68CZ6 603 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 CNNM4Q6P4Q7 775 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 USP49Q70CQ1 688 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 MIGA2Q7L4E1 593 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 NLGN2Q8NFZ4 835 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 ERMNQ8TAM6 284 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 ACER1Q8TDN7 264 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 CDK5RAP3Q96JB5 506 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 C12orf42Q96LP6 360 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 ADARB2Q9NS39 739 aaKnown RBP11.48□□□□□ -0.57
MSH5-213ENST00000468136 LRWD1Q9UFC0 647 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 ZNF541Q9H0D2 1346 aa11.48□□□□□ -0.57
MSH5-213ENST00000468136 BIN1O00499 593 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 ICAM1P05362 532 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 ECE1P42892 770 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 OAZ1P54368 228 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 ARHGAP4P98171 946 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 SPAG1Q07617 926 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 COBLL1Q53SF7 1204 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 HYIQ5T013 277 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 ZNF658Q5TYW1 1059 aaPredicted RBP11.47□□□□□ -0.57
MSH5-213ENST00000468136 SAMD7Q7Z3H4 446 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
MSH5-213ENST00000468136 CRYGNQ8WXF5 182 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 CTAGE1Q96RT6 745 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 C7orf25Q9BPX7 421 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 SLF1Q9BQI6 1058 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 KCNMB3Q9NPA1 279 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 TMEM260Q9NX78 707 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 PCDHA12Q9UN75 941 aa11.47□□□□□ -0.57
MSH5-213ENST00000468136 MYPNQ86TC9 1320 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 A0A087X0B3 334 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 PVALEFA0A1B0GWK0 134 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 ADAMTS3O15072 1205 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 SLURP2P0DP57 97 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 MUTP22033 750 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 CLCN1P35523 988 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 BACE1P56817 501 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 SETQ01105 290 aaPredicted RBP11.46□□□□□ -0.57
MSH5-213ENST00000468136 NCAPHQ15003 741 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 UBE2SQ16763 222 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 FOXR2Q6PJQ5 311 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 SV2BQ7L1I2 683 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 KRT26Q7Z3Y9 468 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 DRC7Q8IY82 874 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 ZNF280CQ8ND82 737 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 ANKRD20A12PQ8NF67 263 aa11.46□□□□□ -0.57
MSH5-213ENST00000468136 ZC3H15Q8WU90 426 aaKnown RBP11.46□□□□□ -0.57
MSH5-213ENST00000468136 NUP88Q99567 741 aaPredicted RBP11.46□□□□□ -0.57
MSH5-213ENST00000468136 TTC12Q9H892 705 aaPredicted RBP11.46□□□□□ -0.57
MSH5-213ENST00000468136 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
MSH5-213ENST00000468136 CTDP1Q9Y5B0 961 aaPredicted RBP11.46□□□□□ -0.57
MSH5-213ENST00000468136 ZNF500O60304 480 aaPredicted RBP11.45□□□□□ -0.58
MSH5-213ENST00000468136 ZBED4O75132 1171 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 RHOBTB3O94955 611 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 TDP2O95551 362 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 RPN1P04843 607 aaKnown RBP11.45□□□□□ -0.58
MSH5-213ENST00000468136 TECP42680 631 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 TXKP42681 527 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 AFMP43652 599 aa11.45□□□□□ -0.58
MSH5-213ENST00000468136 PRELPP51888 382 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms