RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 G3BP1Q13283 466 aaKnown RBP eCLIP8.6□□□□□ -1.033e-15■■□□□ 12.3
SPTBN1-204ENST00000467371 WSCD2Q2TBF2 565 aa8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 SETMARQ53H47 684 aaPredicted RBP8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 PERM1Q5SV97 790 aa8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 PHTF2Q8N3S3 785 aa8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 TCP11L2Q8N4U5 519 aa8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 RTF1Q92541 710 aaKnown RBP8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 USP6NLQ92738 828 aa8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 MTMR8Q96EF0 704 aa8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 SLC26A8Q96RN1 970 aa8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 PI4K2AQ9BTU6 479 aa8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 ISCA1Q9BUE6 129 aa8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 MAK16Q9BXY0 300 aaKnown RBP8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 ABCF3Q9NUQ8 709 aa8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 DNAAF2Q9NVR5 837 aaKnown RBP8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.6□□□□□ -1.03
SPTBN1-204ENST00000467371 SYCE3A1L190 88 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 M0R3H8 397 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 DDX3YO15523 660 aaKnown RBP8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 HOXC11O43248 304 aaPredicted RBP8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 KRT13P13646 458 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 MXI1P50539 228 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 LRCH2Q5VUJ6 765 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 ARHGEF18Q6ZSZ5 1173 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 TRIM74Q86UV6 250 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 TRIM73Q86UV7 250 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 DCLK2Q8N568 766 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 PNMA1Q8ND90 353 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 ADAMTS18Q8TE60 1221 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 BARD1Q99728 777 aaKnown RBP8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 ALG1Q9BT22 464 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 TRPV4Q9HBA0 871 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 ARGLU1Q9NWB6 273 aaPredicted RBP8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 SHANK2Q9UPX8 1470 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 HMOX1P09601 288 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 P4HA1P13674 534 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 CD9P21926 228 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 SLC14A2Q15849 920 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 RRP12Q5JTH9 1297 aaKnown RBP8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 METTL24Q5JXM2 366 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 BTNL9Q6UXG8 535 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 GALNT13Q8IUC8 556 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 RNF168Q8IYW5 571 aaPredicted RBP8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 FAM184AQ8NB25 1140 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 MSANTD4Q8NCY6 345 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 SSH3Q8TE77 659 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 DESI2Q9BSY9 194 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 ZNF446Q9NWS9 450 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 DDX20Q9UHI6 824 aaKnown RBP8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 CFAP74Q9C0B2 1584 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 ANKRD36BQ8N2N9 1353 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 SYNMO15061 1565 aa8.59□□□□□ -1.03
SPTBN1-204ENST00000467371 MCF2LO15068 1137 aa8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 IDI1Q13907 227 aa8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 RASA2Q15283 850 aa8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 USPL1Q5W0Q7 1092 aa8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 NEK10Q6ZWH5 1172 aa8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 C17orf53Q8N3J3 647 aaPredicted RBP8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 NEK1Q96PY6 1258 aa8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 DEF6Q9H4E7 631 aa8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 ESF1Q9H501 851 aaKnown RBP8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 FBRSQ9HAH7 460 aa8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 CLEC11AQ9Y240 323 aa8.59□□□□□ -1.04
SPTBN1-204ENST00000467371 PYGLP06737 847 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 TNNT3P45378 269 aaPredicted RBP8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 ITKQ08881 620 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 TNNI3KQ59H18 835 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 BRICD5Q6PL45 260 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 BTN2A1Q7KYR7 527 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 RALYLQ86SE5 291 aaKnown RBP8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 COL26A1Q96A83 441 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 PRAM1Q96QH2 718 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 TTC12Q9H892 705 aaPredicted RBP8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 SLC5A4Q9NY91 659 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 HCN4Q9Y3Q4 1203 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 ASXL2Q76L83 1435 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 TSPY2A6NKD2 308 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 KIF2AO00139 706 aaPredicted RBP8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 CASQ2O14958 399 aaPredicted RBP8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 PTCD1O75127 700 aaKnown RBP8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 MBD3O95983 291 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 CYP11A1P05108 521 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 TSPY3P0CV98 308 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 TSPY8P0CW00 308 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 TSPY1Q01534 308 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 ZSCAN26Q16670 478 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 C1orf53Q5VUE5 145 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 CRTC1Q6UUV9 634 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 NUTM1Q86Y26 1132 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 TEX11Q8IYF3 940 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 FAM186BQ8IYM0 893 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 ZNF397Q8NF99 534 aaPredicted RBP8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 NUDT16L1Q9BRJ7 211 aaKnown RBP8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 THUMPD2Q9BTF0 503 aaKnown RBP8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 NIFKQ9BYG3 293 aaKnown RBP8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 OSBPL3Q9H4L5 887 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 TBC1D7Q9P0N9 293 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 MAPRE3Q9UPY8 281 aa8.58□□□□□ -1.04
SPTBN1-204ENST00000467371 ADAMTS4O75173 837 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms