RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 MCM8Q9UJA3 840 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 RNF112Q9ULX5 631 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 MAPRE3Q9UPY8 281 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 BACE2Q9Y5Z0 518 aa5.66□□□□□ -1.5
VPS13A-209ENST00000467124 MEFVO15553 781 aaPredicted RBP5.65□□□□□ -1.5
VPS13A-209ENST00000467124 CYP26A1O43174 497 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 EFCAB14O75071 495 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 ASLP04424 464 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 IGFALSP35858 605 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 NOP2P46087 812 aaKnown RBP5.65□□□□□ -1.5
VPS13A-209ENST00000467124 SEPHS1P49903 392 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 GUCY2FP51841 1108 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 GAB4Q2WGN9 574 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 WWC2Q6AWC2 1192 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 RNF111Q6ZNA4 994 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 CPNE8Q86YQ8 564 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 NXPE1Q8N323 547 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 LINC00116Q8NCU8 138 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 NPLOC4Q8TAT6 608 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 COG1Q8WTW3 980 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 CEP89Q96ST8 783 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 SLC12A9Q9BXP2 914 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 AP5S1Q9NUS5 200 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 CHPF2Q9P2E5 772 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 PPARGC1AQ9UBK2 798 aaKnown RBP5.65□□□□□ -1.5
VPS13A-209ENST00000467124 COQ6Q9Y2Z9 468 aa5.65□□□□□ -1.5
VPS13A-209ENST00000467124 TRBV23OR9-2A0A075B6M9 112 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 SSU72P8A0A1W2PR75 194 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 ZNF891A8MT65 544 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-209ENST00000467124 ZNF205O95201 554 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 VAV1P15498 845 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 PCBP3P57721 371 aaKnown RBP5.64□□□□□ -1.51
VPS13A-209ENST00000467124 TMPRSS15P98073 1019 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 DOC2BQ14184 412 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 TESK1Q15569 626 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 INF2Q27J81 1249 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 ACBD5Q5T8D3 534 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-209ENST00000467124 MBLAC2Q68D91 279 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 STYK1Q6J9G0 422 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 RCSD1Q6JBY9 416 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 MAMDC2Q7Z304 686 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-209ENST00000467124 PPM1KQ8N3J5 372 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 DCAF4Q8WV16 495 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 COPS5Q92905 334 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 UBE2FQ969M7 185 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 HSPA12BQ96MM6 686 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 CDADC1Q9BWV3 514 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 CCDC8Q9H0W5 538 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-209ENST00000467124 INTS7Q9NVH2 962 aaKnown RBP5.64□□□□□ -1.51
VPS13A-209ENST00000467124 BTG4Q9NY30 223 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 SAMD15Q9P1V8 674 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 THRAP3Q9Y2W1 955 aaKnown RBP5.64□□□□□ -1.51
VPS13A-209ENST00000467124 PITPNM2Q9BZ72 1349 aa5.64□□□□□ -1.51
VPS13A-209ENST00000467124 GLRX3O76003 335 aaKnown RBP5.63□□□□□ -1.51
VPS13A-209ENST00000467124 TPP2P29144 1249 aaPredicted RBP5.63□□□□□ -1.51
VPS13A-209ENST00000467124 GRIK1P39086 918 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 DNM2P50570 870 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 LAPTM5Q13571 262 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 STAT4Q14765 748 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 RTP2Q5QGT7 225 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 EEF1DP3Q658K8 133 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 INTS5Q6P9B9 1019 aaKnown RBP5.63□□□□□ -1.51
VPS13A-209ENST00000467124 UBE2R2Q712K3 238 aaPredicted RBP5.63□□□□□ -1.51
VPS13A-209ENST00000467124 FMNL3Q8IVF7 1028 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 KSR1Q8IVT5 923 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 ZC3H7AQ8IWR0 971 aaKnown RBP5.63□□□□□ -1.51
VPS13A-209ENST00000467124 STK11IPQ8N1F8 1099 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 USHBP1Q8N6Y0 703 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 IGSF22Q8N9C0 903 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 ASB11Q8WXH4 323 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 MTMR8Q96EF0 704 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 HRASLS5Q96KN8 279 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 PCDHA2Q9Y5H9 948 aa5.63□□□□□ -1.51
VPS13A-209ENST00000467124 PRR19A6NJB7 356 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 M0R2C6 588 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 AQP7O14520 342 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 NEMP1O14524 444 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 EYA4O95677 639 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 APPP05067 770 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 KCNA6P17658 529 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 NAT1P18440 290 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 LTKP29376 864 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 PRKCQQ04759 706 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 E4F1Q66K89 784 aaPredicted RBP5.62□□□□□ -1.51
VPS13A-209ENST00000467124 ZCCHC8Q6NZY4 707 aaKnown RBP5.62□□□□□ -1.51
VPS13A-209ENST00000467124 RSPO2Q6UXX9 243 aaPredicted RBP5.62□□□□□ -1.51
VPS13A-209ENST00000467124 CYP2R1Q6VVX0 501 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 CREG2Q8IUH2 290 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 IFNL3Q8IZI9 196 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 AHI1Q8N157 1196 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 PLD6Q8N2A8 252 aaKnown RBP5.62□□□□□ -1.51
VPS13A-209ENST00000467124 CISD2Q8N5K1 135 aaKnown RBP5.62□□□□□ -1.51
VPS13A-209ENST00000467124 RCBTB1Q8NDN9 531 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 WDR66Q8TBY9 1149 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 PI4K2BQ8TCG2 481 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 DIO2Q92813 273 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 USP7Q93009 1102 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 WNK4Q96J92 1243 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 CHAMP1Q96JM3 812 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 GPR101Q96P66 508 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms