RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 SRGAP2O75044 1071 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 RHOBTB3O94955 611 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
SLX4-202ENST00000466154 CCDC51Q96ER9 411 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 LRRC10BA6NIK2 292 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 PPEF1O14829 653 aaPredicted RBP18.28■□□□□ 0.52
SLX4-202ENST00000466154 IKQ13123 557 aaPredicted RBP18.28■□□□□ 0.52
SLX4-202ENST00000466154 SHROOM1Q2M3G4 852 aaPredicted RBP18.28■□□□□ 0.52
SLX4-202ENST00000466154 FNBP4Q8N3X1 1017 aaPredicted RBP18.28■□□□□ 0.52
SLX4-202ENST00000466154 DAGLBQ8NCG7 672 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 ZNHIT6Q9NWK9 470 aaKnown RBP18.28■□□□□ 0.52
SLX4-202ENST00000466154 MTMR4Q9NYA4 1195 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 CDC23Q9UJX2 597 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 ITIH6Q6UXX5 1313 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 SNED1Q8TER0 1413 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 IPO7O95373 1038 aaKnown RBP18.28■□□□□ 0.52
SLX4-202ENST00000466154 PLA2G4AP47712 749 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 GYS2P54840 703 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 TMEM266Q2M3C6 531 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 TTI2Q6NXR4 508 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 CC2D1AQ6P1N0 951 aaPredicted RBP18.28■□□□□ 0.52
SLX4-202ENST00000466154 SRGAP1Q7Z6B7 1085 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 DUSP9Q99956 384 aaKnown RBP18.28■□□□□ 0.52
SLX4-202ENST00000466154 MMRN2Q9H8L6 949 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 DBNDD1Q9H9R9 158 aa18.28■□□□□ 0.52
SLX4-202ENST00000466154 SASH3O75995 380 aa18.27■□□□□ 0.52
SLX4-202ENST00000466154 IL1R1P14778 569 aa18.27■□□□□ 0.52
SLX4-202ENST00000466154 AMPD3Q01432 767 aa18.27■□□□□ 0.52
SLX4-202ENST00000466154 PCDHAC2Q9Y5I4 1007 aa18.27■□□□□ 0.52
SLX4-202ENST00000466154 BBOX1O75936 387 aa18.27■□□□□ 0.52
SLX4-202ENST00000466154 TERF2Q15554 542 aa18.27■□□□□ 0.52
SLX4-202ENST00000466154 ENOX2Q16206 610 aaKnown RBP18.27■□□□□ 0.52
SLX4-202ENST00000466154 MSL1Q68DK7 614 aa18.27■□□□□ 0.52
SLX4-202ENST00000466154 GLIS3Q8NEA6 775 aa18.27■□□□□ 0.52
SLX4-202ENST00000466154 KCNQ5Q9NR82 932 aa18.27■□□□□ 0.52
SLX4-202ENST00000466154 BTAF1O14981 1849 aa18.27■□□□□ 0.51
SLX4-202ENST00000466154 LAD1O00515 517 aa18.27■□□□□ 0.51
SLX4-202ENST00000466154 TRIM14Q14142 442 aa18.27■□□□□ 0.51
SLX4-202ENST00000466154 KIAA0825Q8IV33 1275 aa18.27■□□□□ 0.51
SLX4-202ENST00000466154 TBC1D22AQ8WUA7 517 aa18.27■□□□□ 0.51
SLX4-202ENST00000466154 ZNF622Q969S3 477 aaKnown RBP eCLIP18.27■□□□□ 0.51
SLX4-202ENST00000466154 MMTAG2Q9BU76 263 aaKnown RBP18.27■□□□□ 0.51
SLX4-202ENST00000466154 SUGCTQ9HAC7 445 aa18.27■□□□□ 0.51
SLX4-202ENST00000466154 ROBO3Q96MS0 1386 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 KIAA1551Q9HCM1 1747 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 USP17L10C9JJH3 530 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 EEF1GP26641 437 aaKnown RBP18.26■□□□□ 0.51
SLX4-202ENST00000466154 KCNB1Q14721 858 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 ADGRF4Q8IZF3 695 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 SERPINB13Q9UIV8 391 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 AFF2P51816 1311 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 CASZ1Q86V15 1759 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 MYMKA6NI61 221 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 CCNE1P24864 410 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 NFIAQ12857 509 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 CERS5Q8N5B7 392 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 THAP9Q9H5L6 903 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 DUSP10Q9Y6W6 482 aa18.26■□□□□ 0.51
SLX4-202ENST00000466154 CTAGE15A4D2H0 777 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 USP17L15C9J2P7 530 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 USP17L13C9JLJ4 530 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 USP17L11C9JVI0 530 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 USP17L18D6R9N7 530 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 USP17L22D6RA61 530 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 USP17L17D6RBQ6 530 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 USP17L19D6RCP7 530 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 USP17L20D6RJB6 530 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 CTAGE8P0CG41 777 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 DNM2P50570 870 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 USP17L24Q0WX57 530 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 KRT79Q5XKE5 535 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 USP17L6PQ6QN14 398 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 CTAGE6Q86UF2 777 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 CTAGE4Q8IX94 777 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 KIAA0895Q8NCT3 520 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 RABGGTAQ92696 567 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 KANSL2Q9H9L4 492 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 BICDL2A1A5D9 508 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 TULP1O00294 542 aaPredicted RBP18.25■□□□□ 0.51
SLX4-202ENST00000466154 PRPHP41219 470 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 ARHGAP25P42331 645 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 FKBP15Q5T1M5 1219 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 TMED8Q6PL24 325 aaPredicted RBP18.25■□□□□ 0.51
SLX4-202ENST00000466154 RSRC2Q7L4I2 434 aaKnown RBP18.25■□□□□ 0.51
SLX4-202ENST00000466154 KRT26Q7Z3Y9 468 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 BBXQ8WY36 941 aaPredicted RBP18.25■□□□□ 0.51
SLX4-202ENST00000466154 LARP4BQ92615 738 aaKnown RBP18.25■□□□□ 0.51
SLX4-202ENST00000466154 AK8Q96MA6 479 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 PSMB7Q99436 277 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 REXO2Q9Y3B8 237 aaKnown RBP18.25■□□□□ 0.51
SLX4-202ENST00000466154 PLEKP08567 350 aaPredicted RBP18.25■□□□□ 0.51
SLX4-202ENST00000466154 GABPB1Q06547 395 aaPredicted RBP18.25■□□□□ 0.51
SLX4-202ENST00000466154 GRB10Q13322 594 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 CNNM4Q6P4Q7 775 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 ZFPM1Q8IX07 1006 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 NELFCDQ8IXH7 590 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 CEP112Q8N8E3 955 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 DEF6Q9H4E7 631 aa18.25■□□□□ 0.51
SLX4-202ENST00000466154 TAL1P17542 331 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms