RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 VPS53Q5VIR6 699 aa18.61■□□□□ 0.57
SND1-203ENST00000463020 CHURC1Q8WUH1 139 aa18.61■□□□□ 0.57
SND1-203ENST00000463020 RCAN3Q9UKA8 241 aa18.61■□□□□ 0.57
SND1-203ENST00000463020 STX8Q9UNK0 236 aa18.61■□□□□ 0.57
SND1-203ENST00000463020 SLC4A7Q9Y6M7 1214 aa18.61■□□□□ 0.57
SND1-203ENST00000463020 TCF20Q9UGU0 1960 aaKnown RBP18.61■□□□□ 0.57
SND1-203ENST00000463020 ZBBXA8MT70 800 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 PLA2G6O60733 806 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 BMP1P13497 986 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 PDE4BQ07343 736 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 TKFCQ3LXA3 575 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 IQSEC1Q6DN90 963 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 RCSD1Q6JBY9 416 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 SLC30A10Q6XR72 485 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 KIAA1211Q6ZU35 1233 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 DEFB128Q7Z7B8 93 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 NAPBQ9H115 298 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 ZNF287Q9HBT7 754 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 CCPG1Q9ULG6 757 aa18.6■□□□□ 0.57
SND1-203ENST00000463020 CA3P07451 260 aa18.59■□□□□ 0.57
SND1-203ENST00000463020 FDX1P10109 184 aa18.59■□□□□ 0.57
SND1-203ENST00000463020 ATP2A2P16615 1042 aaKnown RBP18.59■□□□□ 0.57
SND1-203ENST00000463020 PURAQ00577 322 aaKnown RBP18.59■□□□□ 0.57
SND1-203ENST00000463020 BAATQ14032 418 aaPredicted RBP18.59■□□□□ 0.57
SND1-203ENST00000463020 VTA1Q9NP79 307 aa18.59■□□□□ 0.57
SND1-203ENST00000463020 PCDHA11Q9Y5I1 949 aa18.59■□□□□ 0.57
SND1-203ENST00000463020 PRRC2BQ5JSZ5 2229 aaKnown RBP18.58■□□□□ 0.57
SND1-203ENST00000463020 TNKSO95271 1327 aa18.58■□□□□ 0.57
SND1-203ENST00000463020 FRMPD2Q68DX3 1309 aaPredicted RBP18.58■□□□□ 0.57
SND1-203ENST00000463020 ICAM1P05362 532 aa18.58■□□□□ 0.56
SND1-203ENST00000463020 NOVP48745 357 aa18.58■□□□□ 0.56
SND1-203ENST00000463020 ALDH5A1P51649 535 aaPredicted RBP18.58■□□□□ 0.56
SND1-203ENST00000463020 DUSP28Q4G0W2 176 aa18.58■□□□□ 0.56
SND1-203ENST00000463020 COPS5Q92905 334 aa18.58■□□□□ 0.56
SND1-203ENST00000463020 RANBP17Q9H2T7 1088 aaKnown RBP18.58■□□□□ 0.56
SND1-203ENST00000463020 Q9Y3F1 56 aa18.58■□□□□ 0.56
SND1-203ENST00000463020 MYL3P08590 195 aa18.57■□□□□ 0.56
SND1-203ENST00000463020 CLEC4DQ8WXI8 215 aa18.57■□□□□ 0.56
SND1-203ENST00000463020 GPATCH3Q96I76 525 aa18.57■□□□□ 0.56
SND1-203ENST00000463020 FSD1Q9BTV5 496 aa18.57■□□□□ 0.56
SND1-203ENST00000463020 WDR11Q9BZH6 1224 aa18.57■□□□□ 0.56
SND1-203ENST00000463020 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
SND1-203ENST00000463020 MTIF3Q9H2K0 278 aaKnown RBP18.57■□□□□ 0.56
SND1-203ENST00000463020 MTCH2Q9Y6C9 303 aa18.57■□□□□ 0.56
SND1-203ENST00000463020 TSPY2A6NKD2 308 aa18.56■□□□□ 0.56
SND1-203ENST00000463020 ZEB2O60315 1214 aa18.56■□□□□ 0.56
SND1-203ENST00000463020 CCDC96Q2M329 555 aa18.56■□□□□ 0.56
SND1-203ENST00000463020 NBPF20Q3BBV1 942 aa18.56■□□□□ 0.56
SND1-203ENST00000463020 SCN10AQ9Y5Y9 1956 aa18.55■□□□□ 0.56
SND1-203ENST00000463020 PTPRSQ13332 1948 aa18.55■□□□□ 0.56
SND1-203ENST00000463020 RBM47A0AV96 593 aaKnown RBP18.55■□□□□ 0.56
SND1-203ENST00000463020 TMCO2Q7Z6W1 182 aaPredicted RBP18.55■□□□□ 0.56
SND1-203ENST00000463020 RPUSD2Q8IZ73 545 aaKnown RBP18.55■□□□□ 0.56
SND1-203ENST00000463020 CTAGE1Q96RT6 745 aa18.55■□□□□ 0.56
SND1-203ENST00000463020 GPCPD1Q9NPB8 672 aa18.55■□□□□ 0.56
SND1-203ENST00000463020 PCDHB15Q9Y5E8 787 aa18.55■□□□□ 0.56
SND1-203ENST00000463020 TANC1Q9C0D5 1861 aa18.54■□□□□ 0.56
SND1-203ENST00000463020 SALL3Q9BXA9 1300 aa18.54■□□□□ 0.56
SND1-203ENST00000463020 RANBP6O60518 1105 aaKnown RBP18.54■□□□□ 0.56
SND1-203ENST00000463020 ARIH2O95376 493 aa18.54■□□□□ 0.56
SND1-203ENST00000463020 GPNMBQ14956 572 aa18.54■□□□□ 0.56
SND1-203ENST00000463020 TCTN1Q2MV58 587 aa18.54■□□□□ 0.56
SND1-203ENST00000463020 SYDE2Q5VT97 1194 aa18.54■□□□□ 0.56
SND1-203ENST00000463020 BTNL9Q6UXG8 535 aa18.54■□□□□ 0.56
SND1-203ENST00000463020 OR6J1Q8NGC5 347 aa18.54■□□□□ 0.56
SND1-203ENST00000463020 KHSRPQ92945 711 aaKnown RBP eCLIP18.54■□□□□ 0.563e-7■□□□□ 10.6
SND1-203ENST00000463020 CHMP4BQ9H444 224 aaKnown RBP18.54■□□□□ 0.56
SND1-203ENST00000463020 COL4A4P53420 1690 aaPredicted RBP18.54■□□□□ 0.56
SND1-203ENST00000463020 TET1Q8NFU7 2136 aa18.53■□□□□ 0.56
SND1-203ENST00000463020 TTC41PQ6P2S7 1318 aa18.53■□□□□ 0.56
SND1-203ENST00000463020 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
SND1-203ENST00000463020 SLC3A2P08195 630 aaKnown RBP18.53■□□□□ 0.56
SND1-203ENST00000463020 CALML3P27482 149 aa18.53■□□□□ 0.56
SND1-203ENST00000463020 TAP1Q03518 808 aa18.53■□□□□ 0.56
SND1-203ENST00000463020 FAM47CQ5HY64 1035 aa18.53■□□□□ 0.56
SND1-203ENST00000463020 TMEM67Q5HYA8 995 aa18.53■□□□□ 0.56
SND1-203ENST00000463020 DCAF4Q8WV16 495 aa18.53■□□□□ 0.56
SND1-203ENST00000463020 TMEM47Q9BQJ4 181 aa18.53■□□□□ 0.56
SND1-203ENST00000463020 MTG1Q9BT17 334 aaPredicted RBP18.53■□□□□ 0.56
SND1-203ENST00000463020 ANAPC4Q9UJX5 808 aa18.53■□□□□ 0.56
SND1-203ENST00000463020 LCHNA4D1U4 455 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 ERC2O15083 957 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 LPXNO60711 386 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 IQCF3P0C7M6 154 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 EDNRBP24530 442 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 PLA2G5P39877 138 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 SKIV2LQ15477 1246 aaKnown RBP18.52■□□□□ 0.56
SND1-203ENST00000463020 ARNTL2Q8WYA1 636 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 SEZ6LQ9BYH1 1024 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 CPVLQ9H3G5 476 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 EPHX3Q9H6B9 360 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 POLR3EQ9NVU0 708 aa18.52■□□□□ 0.56
SND1-203ENST00000463020 ORC4O43929 436 aa18.51■□□□□ 0.55
SND1-203ENST00000463020 FGRP09769 529 aa18.51■□□□□ 0.55
SND1-203ENST00000463020 POU3F3P20264 500 aaPredicted RBP18.51■□□□□ 0.55
SND1-203ENST00000463020 HERC6Q8IVU3 1022 aa18.51■□□□□ 0.55
SND1-203ENST00000463020 IL27Q8NEV9 243 aa18.51■□□□□ 0.55
SND1-203ENST00000463020 PFKMP08237 780 aa18.5■□□□□ 0.55
SND1-203ENST00000463020 SUPT20HL2P0C7V6 817 aa18.5■□□□□ 0.55
SND1-203ENST00000463020 PDHBP11177 359 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms