RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 ADALQ6DHV7 355 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 SNRNP48Q6IEG0 339 aaKnown RBP22.65■■□□□ 1.22
PTPN18-207ENST00000462321 SAPCD2Q86UD0 394 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 SAMD3Q8N6K7 520 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 P2RX7Q99572 595 aaKnown RBP22.65■■□□□ 1.22
PTPN18-207ENST00000462321 SLC45A1Q9Y2W3 748 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 CCL15-CCL14A0A0B4J2E2 113 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 HOXA13P31271 388 aaPredicted RBP22.65■■□□□ 1.22
PTPN18-207ENST00000462321 MCM7P33993 719 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 HERVK_113P62684 666 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 ATP2C1P98194 919 aaPredicted RBP22.65■■□□□ 1.22
PTPN18-207ENST00000462321 CCL15Q16663 113 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 LETM2Q2VYF4 491 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 TKFCQ3LXA3 575 aa22.65■■□□□ 1.22
PTPN18-207ENST00000462321 A0A1W2PQ27 194 aa22.64■■□□□ 1.21
PTPN18-207ENST00000462321 A0A1W2PQ64 194 aa22.64■■□□□ 1.21
PTPN18-207ENST00000462321 A0A1W2PQD8 194 aa22.64■■□□□ 1.21
PTPN18-207ENST00000462321 NFIBO00712 420 aa22.64■■□□□ 1.21
PTPN18-207ENST00000462321 HSD17B4P51659 736 aa22.64■■□□□ 1.21
PTPN18-207ENST00000462321 MKRN3Q13064 507 aaKnown RBP22.64■■□□□ 1.21
PTPN18-207ENST00000462321 KRI1Q8N9T8 703 aaKnown RBP22.64■■□□□ 1.21
PTPN18-207ENST00000462321 TRERF1Q96PN7 1200 aa22.64■■□□□ 1.21
PTPN18-207ENST00000462321 MAP3K20Q9NYL2 800 aaKnown RBP22.64■■□□□ 1.21
PTPN18-207ENST00000462321 PNMA3Q9UL41 463 aa22.64■■□□□ 1.21
PTPN18-207ENST00000462321 TOMM70O94826 608 aa22.63■■□□□ 1.21
PTPN18-207ENST00000462321 STAT3P40763 770 aa22.63■■□□□ 1.21
PTPN18-207ENST00000462321 PTGDRQ13258 359 aa22.63■■□□□ 1.21
PTPN18-207ENST00000462321 MUM1L1Q5H9M0 696 aa22.63■■□□□ 1.21
PTPN18-207ENST00000462321 AXDND1Q5T1B0 1012 aaPredicted RBP22.63■■□□□ 1.21
PTPN18-207ENST00000462321 RASAL3Q86YV0 1011 aa22.63■■□□□ 1.21
PTPN18-207ENST00000462321 BRI3BPQ8WY22 251 aa22.63■■□□□ 1.21
PTPN18-207ENST00000462321 TBC1D5Q92609 795 aa22.63■■□□□ 1.21
PTPN18-207ENST00000462321 HOMER2Q9NSB8 354 aa22.63■■□□□ 1.21
PTPN18-207ENST00000462321 RNF146Q9NTX7 359 aa22.63■■□□□ 1.21
PTPN18-207ENST00000462321 CCNT1O60563 726 aaKnown RBP22.62■■□□□ 1.21
PTPN18-207ENST00000462321 PTPREP23469 700 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 SREBF1P36956 1147 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 POTEEQ6S8J3 1075 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 ANKRD23Q86SG2 305 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 CRYGNQ8WXF5 182 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 NAP1L4Q99733 375 aaKnown RBP22.62■■□□□ 1.21
PTPN18-207ENST00000462321 FBXO2Q9UK22 296 aaPredicted RBP22.62■■□□□ 1.21
PTPN18-207ENST00000462321 RIPK3Q9Y572 518 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 TLL2Q9Y6L7 1015 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 CUTAO60888 179 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 ZNF157P51786 506 aaPredicted RBP22.62■■□□□ 1.21
PTPN18-207ENST00000462321 TPRNQ4KMQ1 711 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 PPP4R3AQ6IN85 833 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 RGMBQ6NW40 437 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 GTF3C2Q8WUA4 911 aaPredicted RBP22.62■■□□□ 1.21
PTPN18-207ENST00000462321 MAF1Q9H063 256 aa22.62■■□□□ 1.21
PTPN18-207ENST00000462321 SRPRBQ9Y5M8 271 aaKnown RBP22.62■■□□□ 1.21
PTPN18-207ENST00000462321 COL11A1P12107 1806 aaPredicted RBP22.61■■□□□ 1.21
PTPN18-207ENST00000462321 LAD1O00515 517 aa22.61■■□□□ 1.21
PTPN18-207ENST00000462321 EDIL3O43854 480 aa22.61■■□□□ 1.21
PTPN18-207ENST00000462321 GCFC2P16383 781 aaKnown RBP22.61■■□□□ 1.21
PTPN18-207ENST00000462321 USP11P51784 963 aa22.61■■□□□ 1.21
PTPN18-207ENST00000462321 PLS1Q14651 629 aa22.61■■□□□ 1.21
PTPN18-207ENST00000462321 ARL6IP4Q66PJ3 421 aaKnown RBP22.61■■□□□ 1.21
PTPN18-207ENST00000462321 C4orf32Q8N8J7 132 aa22.61■■□□□ 1.21
PTPN18-207ENST00000462321 FERMT2Q96AC1 680 aa22.61■■□□□ 1.21
PTPN18-207ENST00000462321 EHMT1Q9H9B1 1298 aa22.61■■□□□ 1.21
PTPN18-207ENST00000462321 BTBD7Q9P203 1132 aa22.61■■□□□ 1.21
PTPN18-207ENST00000462321 SMCHD1A6NHR9 2005 aa22.61■■□□□ 1.21
PTPN18-207ENST00000462321 BTBD19C9JJ37 291 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 NEMFO60524 1076 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 ARHGAP4P98171 946 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 MOXD1Q6UVY6 613 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 FCHSD1Q86WN1 690 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 RIOX2Q8IUF8 465 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 ACAD9Q9H845 621 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 PDHXO00330 501 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 CCAR1Q8IX12 1150 aaKnown RBP22.6■■□□□ 1.21
PTPN18-207ENST00000462321 ZNF579Q8NAF0 562 aaKnown RBP22.6■■□□□ 1.21
PTPN18-207ENST00000462321 MRPS27Q92552 414 aaKnown RBP22.6■■□□□ 1.21
PTPN18-207ENST00000462321 SPATC1LQ9H0A9 340 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 RABGAP1Q9Y3P9 1069 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 MRVI1Q9Y6F6 885 aa22.6■■□□□ 1.21
PTPN18-207ENST00000462321 RBBP6Q7Z6E9 1792 aaKnown RBP22.59■■□□□ 1.21
PTPN18-207ENST00000462321 TESPA1A2RU30 521 aaPredicted RBP22.59■■□□□ 1.21
PTPN18-207ENST00000462321 CNMDO75829 334 aa22.59■■□□□ 1.21
PTPN18-207ENST00000462321 TDP2O95551 362 aa22.59■■□□□ 1.21
PTPN18-207ENST00000462321 CMA1P23946 247 aa22.59■■□□□ 1.21
PTPN18-207ENST00000462321 FSTL1Q12841 308 aa22.59■■□□□ 1.21
PTPN18-207ENST00000462321 RNF207Q6ZRF8 634 aa22.59■■□□□ 1.21
PTPN18-207ENST00000462321 FSIP1Q8NA03 581 aa22.59■■□□□ 1.21
PTPN18-207ENST00000462321 CHST13Q8NET6 341 aa22.59■■□□□ 1.21
PTPN18-207ENST00000462321 TMEM88BA6NKF7 163 aa22.58■■□□□ 1.21
PTPN18-207ENST00000462321 SLC10A3P09131 477 aa22.58■■□□□ 1.21
PTPN18-207ENST00000462321 LIG1P18858 919 aa22.58■■□□□ 1.21
PTPN18-207ENST00000462321 PRPHP41219 470 aa22.58■■□□□ 1.21
PTPN18-207ENST00000462321 RPS6P62753 249 aaKnown RBP22.58■■□□□ 1.21
PTPN18-207ENST00000462321 SYTL5Q8TDW5 730 aaPredicted RBP22.58■■□□□ 1.21
PTPN18-207ENST00000462321 CLIC6Q96NY7 704 aa22.58■■□□□ 1.21
PTPN18-207ENST00000462321 PAGR1Q9BTK6 254 aa22.58■■□□□ 1.21
PTPN18-207ENST00000462321 TMEM60Q9H2L4 133 aa22.58■■□□□ 1.21
PTPN18-207ENST00000462321 CYP3A7-CYP3A51PA0A087WV96 503 aa22.57■■□□□ 1.2
PTPN18-207ENST00000462321 CYP3A4P08684 503 aa22.57■■□□□ 1.2
PTPN18-207ENST00000462321 OR52Z1P0C646 297 aa22.57■■□□□ 1.2
PTPN18-207ENST00000462321 CYP3A7P24462 503 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms