RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 SH3BGRP55822 239 aaPredicted RBP10.16□□□□□ -0.78
LINC01140-201ENST00000461990 MEA1Q16626 185 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 FAM153CQ494X1 144 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 TRPM8Q7Z2W7 1104 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 FAM129AQ9BZQ8 928 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 ARHGEF10LQ9HCE6 1279 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 PREBQ9HCU5 417 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 AATFQ9NY61 560 aaKnown RBP eCLIP10.16□□□□□ -0.78
LINC01140-201ENST00000461990 FAM153AQ9UHL3 310 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 PLAAQ9Y263 795 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 PRPF3O43395 683 aaKnown RBP10.16□□□□□ -0.78
LINC01140-201ENST00000461990 ATP2C2O75185 946 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 PARP1P09874 1014 aaKnown RBP10.16□□□□□ -0.78
LINC01140-201ENST00000461990 PHEXP78562 749 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 SLC7A5Q01650 507 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 SLC4A8Q2Y0W8 1093 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 IRGCQ6NXR0 463 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 C8orf74Q6P047 294 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 MCM10Q7L590 875 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 LINS1Q8NG48 757 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 FAM136AQ96C01 138 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 CHP1Q99653 195 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 ZRANB1Q9UGI0 708 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 AGAP1Q9UPQ3 857 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 MAPK8IP1Q9UQF2 711 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 SYNRGQ9UMZ2 1314 aa10.16□□□□□ -0.78
LINC01140-201ENST00000461990 MON2Q7Z3U7 1717 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 KCNJ2P63252 427 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 KANK3Q6NY19 840 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 STOX1Q6ZVD7 989 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 ASRGL1Q7L266 308 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 ARHGAP18Q8N392 663 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 UBA5Q9GZZ9 404 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 VCX3BQ9H321 246 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 CCDC134Q9H6E4 229 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 VCX3AQ9NNX9 186 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 PICK1Q9NRD5 415 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 RNF14Q9UBS8 474 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 TMCC1O94876 653 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 IDO1P14902 403 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 MARCKSP29966 332 aaPredicted RBP10.15□□□□□ -0.78
LINC01140-201ENST00000461990 HPDP32754 393 aaPredicted RBP10.15□□□□□ -0.78
LINC01140-201ENST00000461990 KRT9P35527 623 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 ATP11AP98196 1134 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 ENOX2Q16206 610 aaKnown RBP10.15□□□□□ -0.78
LINC01140-201ENST00000461990 FOXB2Q5VYV0 432 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 PTPRN2Q92932 1015 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 TIPINQ9BVW5 301 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 OCEL1Q9H607 264 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 TRPV5Q9NQA5 729 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 JADE2Q9NQC1 790 aa10.15□□□□□ -0.78
LINC01140-201ENST00000461990 CNOT8Q9UFF9 292 aaKnown RBP10.15□□□□□ -0.78
LINC01140-201ENST00000461990 EDC4Q6P2E9 1401 aaKnown RBP10.15□□□□□ -0.79
LINC01140-201ENST00000461990 PHF20L1A8MW92 1017 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 FOXN1O15353 648 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 VIL1P09327 827 aaKnown RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 MSH2P43246 934 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 CARSP49589 748 aaKnown RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 LACTBP83111 547 aaPredicted RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 TMEM154Q6P9G4 183 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 NUP88Q99567 741 aaPredicted RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 FSD1Q9BTV5 496 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 RAB17Q9H0T7 212 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 NCOA5Q9HCD5 579 aaKnown RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 SPATA7Q9P0W8 599 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 NFU1Q9UMS0 254 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 TMEM98Q9Y2Y6 226 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 BZW2Q9Y6E2 419 aaKnown RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 TPD52L2O43399 206 aaKnown RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 USO1O60763 962 aaKnown RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 TMOD1P28289 359 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 SH3TC2Q8TF17 1288 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 IQCDQ96DY2 449 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 RMDN2Q96LZ7 410 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 XPO6Q96QU8 1125 aaKnown RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 RPS6KC1Q96S38 1066 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 TUBGCP4Q9UGJ1 667 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 TSKSQ9UJT2 592 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 MBD4O95243 580 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 GLI1P08151 1106 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 GBP1P32455 592 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 POLE2P56282 527 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 ZNF844Q08AG5 666 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 TMEM62Q0P6H9 643 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 BNIP1Q12981 228 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 PLS1Q14651 629 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 TTC39AQ5SRH9 613 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 RNF168Q8IYW5 571 aaPredicted RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 KCNN1Q92952 543 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 HAPLN3Q96S86 360 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 CCDC28BQ9BUN5 200 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 KRT23Q9C075 422 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 TSPYL2Q9H2G4 693 aaPredicted RBP10.14□□□□□ -0.79
LINC01140-201ENST00000461990 PCDH18Q9HCL0 1135 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 HYOU1Q9Y4L1 999 aa10.14□□□□□ -0.79
LINC01140-201ENST00000461990 UPP2O95045 317 aa10.13□□□□□ -0.79
LINC01140-201ENST00000461990 MYBP10242 640 aa10.13□□□□□ -0.79
LINC01140-201ENST00000461990 SKIV2L2P42285 1042 aaKnown RBP10.13□□□□□ -0.79
LINC01140-201ENST00000461990 SPAG1Q07617 926 aa10.13□□□□□ -0.79
LINC01140-201ENST00000461990 BTG3Q14201 252 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms