RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, human

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNM1-204	ENST00000461862	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	12.04	□□□□□ -0.48
SCNM1-204	ENST00000461862	RRAGC	Q9HB90	399 aa		12.04	□□□□□ -0.48
SCNM1-204	ENST00000461862	ZSWIM5	Q9P217	1185 aa		12.04	□□□□□ -0.48
SCNM1-204	ENST00000461862	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
SCNM1-204	ENST00000461862	ZDHHC9	Q9Y397	364 aa		12.04	□□□□□ -0.48
SCNM1-204	ENST00000461862	ATP6V1D	Q9Y5K8	247 aa		12.04	□□□□□ -0.48
SCNM1-204	ENST00000461862	ADAMTSL1	Q8N6G6	1762 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	IFIT3	O14879	490 aa	Known RBP	12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	EFS	O43281	561 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	ZSCAN22	P10073	491 aa	Predicted RBP	12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	EPX	P11678	715 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	SYT1	P21579	422 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	CXCL9	Q07325	125 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	PDE4B	Q07343	736 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	DACT2	Q5SW24	774 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	HHIPL2	Q6UWX4	724 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	CERS5	Q8N5B7	392 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	NSUN7	Q8NE18	718 aa	Known RBP	12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	IGDCC4	Q8TDY8	1250 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	LY9	Q9HBG7	655 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	MCM9	Q9NXL9	1143 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	TTF2	Q9UNY4	1162 aa	Known RBP	12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	DAGLA	Q9Y4D2	1042 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	GJA3	Q9Y6H8	435 aa		12.03	□□□□□ -0.48
SCNM1-204	ENST00000461862	MYH8	P13535	1937 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	CDKL5	O76039	1030 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	RHBDL3	P58872	404 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	WTAP	Q15007	396 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	RRP12	Q5JTH9	1297 aa	Known RBP	12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	C12orf60	Q5U649	245 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	CPLX2	Q6PUV4	134 aa	Known RBP	12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	APOA5	Q6Q788	366 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	SYNE3	Q6ZMZ3	975 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	IQCA1	Q86XH1	822 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	NIM1K	Q8IY84	436 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	RGS22	Q8NE09	1264 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	TEKT1	Q969V4	418 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	UBAC1	Q9BSL1	405 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	ZNF287	Q9HBT7	754 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	TOMM22	Q9NS69	142 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	TFIP11	Q9UBB9	837 aa	Known RBP	12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	BRPF3	Q9ULD4	1205 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	ZNF232	Q9UNY5	417 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	TACC3	Q9Y6A5	838 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	MYO3B	Q8WXR4	1341 aa		12.02	□□□□□ -0.49
SCNM1-204	ENST00000461862	MYH15	Q9Y2K3	1946 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	SERTM1	A2A2V5	107 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	PTPDC1	A2A3K4	754 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	PALM3	A6NDB9	673 aa	Predicted RBP	12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	GLTPD2	A6NH11	291 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	CCDC69	A6NI79	296 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	SFI1	A8K8P3	1242 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	ZBTB43	O43298	467 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	METAP2	P50579	478 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	PPP2R5B	Q15173	497 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	PLA2G4E	Q3MJ16	856 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	CCDC178	Q5BJE1	867 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	LARP1B	Q659C4	914 aa	Known RBP	12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	NFXL1	Q6ZNB6	911 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	FAM184A	Q8NB25	1140 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	TSEN2	Q8NCE0	465 aa	Known RBP	12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	TGFBRAP1	Q8WUH2	860 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	ZDHHC15	Q96MV8	337 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	MTMR6	Q9Y217	621 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	FLT1	P17948	1338 aa		12.01	□□□□□ -0.49
SCNM1-204	ENST00000461862	CYP2D7	A0A087X1C5	515 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862		M0R2N6	131 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	PSMD14	O00487	310 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	CPLX1	O14810	134 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	JAK2	O60674	1132 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	CTDNEP1	O95476	244 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	F13A1	P00488	732 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	EGFR	P00533	1210 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	CCT2	P78371	535 aa	Known RBP	12	□□□□□ -0.49
SCNM1-204	ENST00000461862	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12	□□□□□ -0.49
SCNM1-204	ENST00000461862	LRRC69	Q6ZNQ3	347 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	FCHSD1	Q86WN1	690 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	INCENP	Q9NQS7	918 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	SERPINA10	Q9UK55	444 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	MKL2	Q9ULH7	1088 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	ZNRF3	Q9ULT6	936 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	SLC12A7	Q9Y666	1083 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	TNKS	O95271	1327 aa		12	□□□□□ -0.49
SCNM1-204	ENST00000461862	CCDC196	A0A1B0GTZ2	297 aa		11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	VPS37C	A5D8V6	355 aa	Predicted RBP	11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	RANBP6	O60518	1105 aa	Known RBP	11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	POLR3D	P05423	398 aa	Predicted RBP	11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	CYP2D6	P10635	497 aa		11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	EPS15	P42566	896 aa		11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	CRK	P46108	304 aa		11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	GMPS	P49915	693 aa	Predicted RBP	11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	SEC23A	Q15436	765 aa		11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	DLK2	Q6UY11	383 aa		11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	LINC00114	Q6XXX2	140 aa		11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	MAPKAPK5	Q8IW41	473 aa		11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	JDP2	Q8WYK2	163 aa		11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	PCDHAC2	Q9Y5I4	1007 aa		11.99	□□□□□ -0.49
SCNM1-204	ENST00000461862	STK36	Q9NRP7	1315 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms