RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 PNOCQ13519 176 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 KARSQ15046 597 aaKnown RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 TYW1BQ6NUM6 668 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 CDAN1Q8IWY9 1227 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 SLFN12Q8IYM2 578 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 SPC24Q8NBT2 197 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 RBM46Q8TBY0 533 aaKnown RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 EPSTI1Q96J88 318 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 MPHOSPH6Q99547 160 aaKnown RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 GTPBP4Q9BZE4 634 aaKnown RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 KIAA1683Q9H0B3 1180 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 CBX8Q9HC52 389 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 FBXO28Q9NVF7 368 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 MRVI1Q9Y6F6 885 aa4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 MYO5AQ9Y4I1 1855 aaKnown RBP4.64□□□□□ -1.67
ATP13A3-206ENST00000461660 B4DLN1 442 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 C19orf81C9J6K1 198 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 EGFRP00533 1210 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 MYL5Q02045 173 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 LONRF3Q496Y0 759 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 NCAPH2Q6IBW4 605 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 SV2BQ7L1I2 683 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 LDHDQ86WU2 507 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 PLA2G4DQ86XP0 818 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 MLKLQ8NB16 471 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 STAMQ92783 540 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 ZKSCAN4Q969J2 545 aaPredicted RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 UIMC1Q96RL1 719 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 TTC12Q9H892 705 aaPredicted RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 SAMM50Q9Y512 469 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 PCDHA5Q9Y5H7 936 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 STK24Q9Y6E0 443 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 NRXN2Q9P2S2 1712 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 ASTN2O75129 1339 aaPredicted RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 KDM3AQ9Y4C1 1321 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 COL2A1P02458 1487 aaPredicted RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 LRRC37AA6NMS7 1700 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 A0A1W2PRG0 241 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 PSMA7O14818 248 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 GTPBP6O43824 516 aaPredicted RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 KIF20AO95235 890 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 TDP2O95551 362 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 MYCLP12524 364 aaPredicted RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 CDC25AP30304 524 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 PRPHP41219 470 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 NOM1Q5C9Z4 860 aaKnown RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 EARS2Q5JPH6 523 aaKnown RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 PNMA8AQ86V59 439 aaPredicted RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 TRIML1Q8N9V2 468 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 OTUD5Q96G74 571 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 PAGR1Q9BTK6 254 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 CUEDC2Q9H467 287 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 MAGEF1Q9HAY2 307 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 RAVER2Q9HCJ3 691 aaKnown RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 PKD2L1Q9P0L9 805 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 RABGAP1Q9Y3P9 1069 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 CNTNAP1P78357 1384 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 CHMP2AO43633 222 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 GAS7O60861 476 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 TBCAO75347 108 aaKnown RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 CAPN15O75808 1086 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 USP11P51784 963 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 BACE1P56817 501 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 FILIP1Q7Z7B0 1213 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 METTL16Q86W50 562 aaKnown RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 ENGASEQ8NFI3 743 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 SLC10A4Q96EP9 437 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 PCMTD1Q96MG8 357 aaPredicted RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 NT5C3AQ9H0P0 336 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 RNF146Q9NTX7 359 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 HOXC10Q9NYD6 342 aa4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.63□□□□□ -1.67
ATP13A3-206ENST00000461660 NAV1Q8NEY1 1877 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ADM5C9JUS6 153 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 VCAM1P19320 739 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 UBXN2AP68543 259 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 COG2Q14746 738 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ARHGEF16Q5VV41 709 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 USP50Q70EL3 339 aaPredicted RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 TEX2Q8IWB9 1127 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ANKRD13AQ8IZ07 590 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 SMCR8Q8TEV9 937 aaPredicted RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 TSG101Q99816 390 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 GLIS2Q9BZE0 524 aaPredicted RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 TMEM60Q9H2L4 133 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 ELP3Q9H9T3 547 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 DISC1Q9NRI5 854 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 STK17AQ9UEE5 414 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 PLCG1P19174 1290 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 PPP1R2P41236 205 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 NOVP48745 357 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 GRIN1Q05586 938 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 SPAG1Q07617 926 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 SNW1Q13573 536 aaKnown RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 TSR1Q2NL82 804 aaKnown RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 DPCR1Q3MIW9 517 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 LRCH2Q5VUJ6 765 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 SNRNP48Q6IEG0 339 aaKnown RBP4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 BTNL9Q6UXG8 535 aa4.62□□□□□ -1.67
ATP13A3-206ENST00000461660 RNF207Q6ZRF8 634 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms